Search Results - Readman Chiu

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  1. 1
    Straglr: discovering and genotyping tandem repeat expansions using whole genome long-read sequences

    Straglr: discovering and genotyping tandem repeat expansions using whole genome long-read sequences by Readman Chiu, Indhu‐Shree Rajan‐Babu, Jan M. Friedman, İnanç Birol

    Published 2021
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  2. 2
    RNA-Bloom enables reference-free and reference-guided sequence assembly for single-cell transcriptomes

    RNA-Bloom enables reference-free and reference-guided sequence assembly for single-cell transcriptomes by Ka Ming Nip, Readman Chiu, Chen Yang, Justin Chu, Hamid Mohamadi, René L. Warren, İnanç Birol

    Published 2020
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  3. 3
    Reference-free assembly of long-read transcriptome sequencing data with RNA-Bloom2

    Reference-free assembly of long-read transcriptome sequencing data with RNA-Bloom2 by Ka Ming Nip, Saber Hafezqorani, Kristina Gagalova, Readman Chiu, Chen Yang, René L. Warren, İnanç Birol

    Published 2023
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  4. 4
    Identification and analysis of murine pancreatic islet enhancers

    Identification and analysis of murine pancreatic islet enhancers by Bryan Tennant, A. Gordon Robertson, Marabeth M. Kramer, Leping Li, Xuekui Zhang, Miami Beach, Nina Thiessen, Readman Chiu, Karen Mungall, Cheryl J. Whiting, Paul V. Sabatini, Appl Kim, Raphaël Gottardo, Marco A. Marra, Francis C. Lynn, Steven J.M. Jones, Pamela A. Hoodless, Brad G. Hoffman

    Published 2012
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  5. 5
    Improved white spruce (<i>Picea glauca</i>) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism

    Improved white spruce (<i>Picea glauca</i>) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism by René L. Warren, Christopher I. Keeling, Macaire M. S. Yuen, Anthony Raymond, Greg Taylor, Benjamin P. Vandervalk, Hamid Mohamadi, Daniel Paulino, Readman Chiu, Shaun D. Jackman, Gordon Robertson, Chen Yang, Brian Boyle, Margarete Hoffmann, Detlef Weigel, David R. Nelson, Carol Ritland, Nathalie Isabel, Barry Jaquish, Alvin D. Yanchuk, Jean Bousquet, Steven J.M. Jones, John Mackay, İnanç Birol, Jöerg Bohlmann

    Published 2015
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  6. 6
    A clinical transcriptome approach to patient stratification and therapy selection in acute myeloid leukemia

    A clinical transcriptome approach to patient stratification and therapy selection in acute myeloid leukemia by Roderick Docking, Jeremy Parker, Martin Jädersten, Gerben Duns, Linda Chang, Jihong Jiang, Jessica A. Pilsworth, Lucas Swanson, Simon K. Chan, Readman Chiu, Ka Ming Nip, Suárez Alonso Mar, Angela Mo, Xuan Wang, Sergio Martínez-Høyer, Ryan J. Stubbins, Karen Mungall, Andrew J. Mungall, Richard A. Moore, Steven J.M. Jones, İnanç Birol, Marco A. Marra, Donna E. Hogge, Aly Karsan

    Published 2021
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  7. 7
    Genome-wide sequencing as a first-tier screening test for short tandem repeat expansions

    Genome-wide sequencing as a first-tier screening test for short tandem repeat expansions by Indhu‐Shree Rajan‐Babu, Junran J. Peng, Readman Chiu, Patricia Birch, Madeline Couse, Colleen Guimond, Anna Lehman, Jill Mwenifumbo, Clara van Karnebeek, Jan M. Friedman, Shelin Adam, Christèle du Souich, Alison M. Elliott, Anna Lehman, Jill Mwenifumbo, Tanya N. Nelson, Clara van Karnebeek, Jan M. Friedman, Chenkai Li, Arezoo Mohajeri, Egor Dolzhenko, Michael A. Eberle, İnanç Birol, Jan M. Friedman

    Published 2021
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  8. 8
    A set of BAC clones spanning the human genome

    A set of BAC clones spanning the human genome by Martin Krzywinski, Ian Bosdet, Duane E. Smailus, Readman Chiu, Carrie Mathewson, Natasja Wye, Sarah Barber, Mabel Brown-John, Susanna Chan, Steve Chand, Alison Cloutier, Noreen Girn, Darlene Lee, Amara Masson, Michael Mayo, Teika Olson, Pawan Pandoh, Anna Liisa Prabhu, Eric Schoenmakers, Miranda Tsai, Donna G. Albertson, Wan L. Lam, Chik On Choy, Kazutoyo Osoegawa, Shaying Zhao, Pieter J. de Jong, Jacqueline E. Schein, Steven J.M. Jones, Marco A. Marra

    Published 2004
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  9. 9
    Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing

    Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing by Ryan D. Morin, Karen Mungall, Erin Pleasance, Andrew J. Mungall, Rodrigo Goya, Ryan D. Huff, David W. Scott, Jiarui Ding, Andrew Roth, Readman Chiu, Richard Corbett, Fong Chun Chan, María Méndez-Lago, Diane L. Trinh, Madison Bolger-Munro, Greg Taylor, Alireza Hadj Khodabakhshi, Susana Ben‐Neriah, Julia R. Pon, Barbara Meissner, Bruce W. Woolcock, Noushin Farnoud, Sanja Rogić, Emilia L. Lim, Nathalie A. Johnson, Sohrab P. Shah, Steven J.M. Jones, Christian Steidl, Robert A. Holt, İnanç Birol, Richard A. Moore, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra

    Published 2013
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  10. 10
    Concurrent <i>CIC</i> mutations, <i>IDH</i> mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers

    Concurrent <i>CIC</i> mutations, <i>IDH</i> mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers by Stephen Yip, Yaron S.N. Butterfield, Olena Morozova, Suganthi Chittaranjan, Michael Blough, Jianghong An, İnanç Birol, Charles Chesnelong, Readman Chiu, Eric Chuah, Richard Corbett, Roderick Docking, Marlo Firme, Martin Hirst, Shaun D. Jackman, Aly Karsan, Haiyan Li, David N. Louis, Alexandra Maslova, Richard A. Moore, Annie Moradian, Karen Mungall, Marco Perizzolo, Jenny Q. Qian, Glòria Roldán, Eric E. Smith, Jessica Tamura‐Wells, Nina Thiessen, Richard Varhol, Samuel Weiss, Wei Wu, Sean Young, Yongjun Zhao, Andrew J. Mungall, Steven J.M. Jones, Gregg B. Morin, Jennifer A. Chan, J. Gregory Cairncross, Marco A. Marra

    Published 2011
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  11. 11
    Obligate biotrophy features unraveled by the genomic analysis of rust fungi

    Obligate biotrophy features unraveled by the genomic analysis of rust fungi by Sébastien Duplessis, Christina A. Cuomo, Yao‐Cheng Lin, Andrea Aerts, Émilie Tisserant, Claire Veneault‐Fourrey, David L. Joly, Stéphane Hacquard, Joëlle Amselem, Brandi L. Cantarel, Readman Chiu, Pedro M. Coutinho, Nicolas Feau, Matthew A. Field, Pascal Frey, Éric Gelhaye, Jonathan M. Goldberg, Manfred Grabherr, Chinnappa D. Kodira, Annegret Kohler, Ursula Kües, Erika Lindquist, Susan Lucas, Rohit Mago, Evan Mauceli, Emmanuelle Morin, Claude Murat, Jasmyn Pangilinan, Robert Park, Matthew D. Pearson, Hadi Quesneville, Nicolas Rouhier, Sharadha Sakthikumar, Asaf Salamov, Jeremy Schmutz, Benjamin Selles, Harris Shapiro, Philippe Tanguay, Gerald A. Tuskan, Bernard Henrissat, Yves Van de Peer, Pierre Rouzé, Jeffrey G. Ellis, Peter N. Dodds, Jacqueline E. Schein, Shaobin Zhong, Richard C. Hamelin, Igor V. Grigoriev, Les J. Szabo, Francis Martin

    Published 2011
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  12. 12
    Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma

    Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma by Ryan D. Morin, María Méndez-Lago, Andrew J. Mungall, Rodrigo Goya, Karen Mungall, Richard Corbett, Nathalie A. Johnson, Tesa Severson, Readman Chiu, Matthew A. Field, Shaun D. Jackman, Martin Krzywinski, David W. Scott, Diane L. Trinh, Jessica Tamura‐Wells, Sa Li, Marlo Firme, Sanja Rogić, Malachi Griffith, Susanna Chan, Oleksandr Yakovenko, Irmtraud M. Meyer, Eric Y. Stutheit-Zhao, Duane E. Smailus, Michelle Moksa, Suganthi Chittaranjan, Lisa M. Rimsza, Angela Brooks‐Wilson, John J. Spinelli, Susana Ben‐Neriah, Barbara Meissner, Bruce W. Woolcock, Merrill Boyle, Helen McDonald, Angela Tam, Yongjun Zhao, Allen Delaney, Thomas Zeng, Kane Tse, Yaron S.N. Butterfield, İnanç Birol, Robert A. Holt, Jacqueline E. Schein, Douglas E. Horsman, Richard A. Moore, Steven J.M. Jones, Joseph M. Connors, Martin Hirst, Randy D. Gascoyne, Marco A. Marra

    Published 2011
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  13. 13
    The Genome of the Basidiomycetous Yeast and Human Pathogen <i>Cryptococcus neoformans</i>

    The Genome of the Basidiomycetous Yeast and Human Pathogen <i>Cryptococcus neoformans</i> by Brendan Loftus, Eula Fung, Paola Roncaglia, Don Rowley, Paolo Amedeo, Dan Bruno, Jessica Vamathevan, Molly Miranda, Iain Anderson, James A. Fraser, Jonathan Allen, Ian E. Bosdet, Michael R. Brent, Readman Chiu, Tamara L. Doering, Maureen J. Donlin, Cletus A. D’Souza, Deborah S. Fox, V.B. Grinberg, Jianmin Fu, Marilyn Fukushima, Brian J. Haas, James Huang, Guilhem Janbon, Steven J.M. Jones, Hean Koo, Martin Krzywinski, June K. Kwon-Chung, Klaus B. Lengeler, Rama Maiti, Marco A. Marra, Robert E. Marra, Carrie Mathewson, Thomas G. Mitchell, Mihaela Pertea, Florenta Riggs, Steven L. Salzberg, Jacqueline E. Schein, Alla Shvartsbeyn, Heesun Shin, Martin Shumway, Charles A. Specht, Bernard Suh, Aaron Tenney, Terry Utterback, Brian L. Wickes, Jennifer R. Wortman, Natasja H. Wye, James W. Kronstad, Jennifer K. Lodge, Joseph Heitman, Ronald W. Davis, Claire M. Fraser, Richard W. Hyman

    Published 2005
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  14. 14
    The genetic landscape of high-risk neuroblastoma

    The genetic landscape of high-risk neuroblastoma by Trevor J. Pugh, Olena Morozova, Edward F. Attiyeh, Shahab Asgharzadeh, Jun S. Wei, Daniel Auclair, Scott L. Carter, Kristian Cibulskis, Megan Hanna, Adam Kieżun, Jaegil Kim, Michael S. Lawrence, Lee Lichenstein, Aaron McKenna, Chandra Sekhar Pedamallu, Alex H. Ramos, Erica Shefler, Andrey Sivachenko, Carrie Sougnez, Chip Stewart, Adrian Ally, İnanç Birol, Readman Chiu, Richard Corbett, Martin Hirst, Shaun D. Jackman, Baljit Kamoh, Alireza Hadj Khodabakshi, Martin Krzywinski, Allan Lo, Richard A. Moore, Karen Mungall, Jenny Q. Qian, Angela Tam, Nina Thiessen, Yongjun Zhao, Kristina A. Cole, Maura Diamond, Sharon J. Diskin, Yaël P. Mossé, Andrew Wood, Lingyun Ji, Richard Sposto, Thomas Badgett, Wendy B. London, Yvonne Moyer, Julie M. Gastier‐Foster, Malcolm A. Smith, Jaime M. Guidry Auvil, Daniela S. Gerhard, Michael D. Hogarty, Steven J.M. Jones, Eric S. Lander, Stacey Gabriel, Gad Getz, Robert C. Seeger, Javed Khan, Marco A. Marra, Matthew Meyerson, John M. Maris

    Published 2013
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  15. 15
    A physical map of the bovine genome

    A physical map of the bovine genome by W. M. Snelling, Readman Chiu, Jacqueline E. Schein, Matthew Hobbs, Colette A. Abbey, David L. Adelson, Jan Aerts, Gary L. Bennett, Ian E. Bosdet, Mekki Boussaha, Rüdiger Bräuning, Alexandre Rodrigues Caetano, Marcos Mota do Carmo Costa, Allan M. Crawford, Brian P. Dalrymple, Andre A. Eggen, Annelie Everts-van der Wind, Sandrine Floriot, Mathieu Gautier, C. A. Gill, Ronnie D. Green, Robert A. Holt, O. Jann, Steven J.M. Jones, Steven M. Kappes, J. W. Keele, Pieter J. de Jong, Denis M. Larkin, Harris A. Lewin, John C. McEwan, Stephanie McKay, Marco A. Marra, Carrie Mathewson, Lakshmi K. Matukumalli, S. S. Moore, Brenda M. Murdoch, F. W. Nicholas, Kazutoyo Osoegawa, Alice C. Roy, Hanni Salih, Laurent Schibler, Robert D. Schnabel, Licia Silveri, Loren C. Skow, Timothy P. L. Smith, Tad S. Sonstegard, Jeremy F. Taylor, Ross L. Tellam, Curtis P. Van Tassell, J. L. Williams, James E. Womack, Natasja H. Wye, George Yang, Shaying Zhao

    Published 2007
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  16. 16
    Genomic and Epigenomic Landscapes of Adult De Novo Acute Myeloid Leukemia

    Genomic and Epigenomic Landscapes of Adult De Novo Acute Myeloid Leukemia by T J Ley, Christopher A. Miller, Li Ding, Benjamin J. Raphael, Andrew J. Mungall, Gordon L. Robertson, Katherine A. Hoadley, Timothy J. Triche, Peter W. Laird, Jack Baty, Lucinda Fulton, Robert S. Fulton, Sharon E. Heath, Joelle Kalicki-Veizer, Cyriac Kandoth, Jeffery M. Klco, Daniel C. Koboldt, Krishna Kanchi, Shashikant Kulkarni, Tamara Lamprecht, David E. Larson, Ge Lin, Charles Lu, Michael D. McLellan, Joshua F. McMichael, Jacqueline E. Payton, Heather K. Schmidt, David H. Spencer, Michael H. Tomasson, John W. Wallis, Lukas D. Wartman, Mark A. Watson, John S. Welch, Michael C. Wendl, Adrian Ally, Miruna Balasundaram, İnanç Birol, Yaron S.N. Butterfield, Readman Chiu, Andy Chu, Eric Chuah, Hye Jung E. Chun, Richard Corbett, Noreen Dhalla, Ranabir Guin, Anyuan He, Carrie Hirst, Martin Hirst, Robert A. Holt, Steven J.M. Jones, Aly Karsan, Darlene Lee, Haiyan I. Li, Marco A. Marra, Michael Mayo, Richard A. Moore, Karen Mungall, Jeremy Parker, Erin Pleasance, Patrick Plettner, Jacquie Schein, Dominik Stoll, Lucas Swanson, Angela Tam, Nina Thiessen, Richard Varhol, Natasja Wye, Yongjun Zhao, Stacey Gabriel, Gad Getz, Carrie Sougnez, Lihua Zou, Mark D.M. Leiserson, Fabio Vandin, Hsin Ta Wu, Frederick R. Applebaum, Stephen B. Baylin, Rehan Akbani, Bradley M. Broom, Ken Chen, Thomas Motter, Khanh Cong Nguyen, John N. Weinstein, Nianziang Zhang, Martin L. Ferguson, Christopher M. Adams, Aaron Black, Jay Bowen, Julie M. Gastier‐Foster, Thomas W. Grossman, Tara M. Lichtenberg, Lisa Wise, Tanja M. Davidsen, John A. Demchok, Kenna Shaw, Margi Sheth, Heidi J. Sofia, Liming Yang, James R. Downing, Greg Eley

    Published 2013
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  17. 17
    Subgroup-specific structural variation across 1,000 medulloblastoma genomes

    Subgroup-specific structural variation across 1,000 medulloblastoma genomes by Paul A. Northcott, David Shih, John Peacock, Livia Garzia, A. Sorana Morrissy, Thomas Zichner, Adrian M. Stütz, Andrey Korshunov, Jüri Reimand, Steven E. Schumacher, Rameen Beroukhim, David W. Ellison, Christian R. Marshall, Anath C. Lionel, Stephen C. Mack, Adrian M. Dubuc, Yuan Yao, Vijay Ramaswamy, Betty Luu, Adi Rolider, Florence M.G. Cavalli, Xin Wang, Marc Remke, Xiaochong Wu, Readman Chiu, Andy Chu, Eric Chuah, Richard Corbett, Gemma R Hoad, Shaun D. Jackman, Yisu Li, Allan Lo, Karen Mungall, Ka Ming Nip, Jenny Q. Qian, Anthony Raymond, Nina Thiessen, Richard Varhol, İnanç Birol, Richard A. Moore, Andrew J. Mungall, Robert A. Holt, Daisuke Kawauchi, Martine F. Roussel, Marcel Kool, David Jones, Hendrick Witt, Africa Fernández-L, Anna Marie Kenney, Robert J. Wechsler‐Reya, Peter B. Dirks, Tzvi Aviv, Wiesława Grajkowska, Marta Perek‐Polnik, Christine Haberler, Olivier Delattre, Stéphanie Reynaud, François Doz, Sarah S. Pernet-Fattet, Byung-Kyu Cho, Seung-Ki Kim, Kyu‐Chang Wang, Wolfram Scheurlen, Charles G. Eberhart, Michelle Fèvre‐Montange, Anne Jouvet, Ian F. Pollack, Xing Fan, Karin M. Muraszko, G. Yancey Gillespie, Concezio Di Rocco, Luca Massimi, Erna Michiels, Nanne K. Kloosterhof, Pim J. French, Johan M. Kros, James M. Olson, Richard G. Ellenbogen, Karel Zitterbart, Leoš Křen, Reid C. Thompson, Michael K. Cooper, Bolesław Lach, Roger E. McLendon, Darell D. Bigner, Adam M. Fontebasso, Steffen Albrecht, Nada Jabado, Janet C. Lindsey, Simon Bailey, Nalin Gupta, William A. Weiss, László Bognár, Álmos Klekner, Timothy Van Meter, Toshihiro Kumabe, Teiji Tominaga, Samer K. Elbabaa, Jeffrey R. Leonard, Joshua B. Rubin

    Published 2012
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