Search Results - ROBERT FINN

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  1. 1
    Pfam: clans, web tools and services

    Pfam: clans, web tools and services by ROBERT FINN

    Published 2005
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  2. 2
    DUFs: families in search of function

    DUFs: families in search of function by Alex Bateman, Penny Coggill, ROBERT FINN

    Published 2010
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  3. 3
    Predicting active site residue annotations in the Pfam database

    Predicting active site residue annotations in the Pfam database by Jaina Mistry, Alex Bateman, ROBERT FINN

    Published 2007
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  4. 4
    Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC

    Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC by Paul Saary, Alex Mitchell, ROBERT FINN

    Published 2020
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  5. 5
    Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models

    Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models by Travis J. Wheeler, Jody Clements, ROBERT FINN

    Published 2014
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  6. 6
    HMMER web server: interactive sequence similarity searching

    HMMER web server: interactive sequence similarity searching by ROBERT FINN, Jody Clements, Sean R. Eddy

    Published 2011
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  7. 7
    TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations

    TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations by Haiming Tang, ROBERT FINN, Paul D. Thomas

    Published 2018
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  8. 8
    Twenty years of the<i>MEROPS</i>database of proteolytic enzymes, their substrates and inhibitors

    Twenty years of the<i>MEROPS</i>database of proteolytic enzymes, their substrates and inhibitors by Neil D. Rawlings, A. John Barrett, ROBERT FINN

    Published 2015
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  9. 9
    Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments

    Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments by Alexandre Almeida, Alex Mitchell, Aleksandra Tarkowska, ROBERT FINN

    Published 2018
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  10. 10
    Microbial composition of Kombucha determined using amplicon sequencing and shotgun metagenomics

    Microbial composition of Kombucha determined using amplicon sequencing and shotgun metagenomics by Muzaffer Arıkan, Alex Mitchell, ROBERT FINN, Filiz Gürel

    Published 2020
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  11. 11
    iPfam: a database of protein family and domain interactions found in the Protein Data Bank

    iPfam: a database of protein family and domain interactions found in the Protein Data Bank by ROBERT FINN, Benjamin L. Miller, Jody Clements, Alex Bateman

    Published 2013
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  12. 12
    mettannotator: a comprehensive and scalable Nextflow annotation pipeline for prokaryotic assemblies

    mettannotator: a comprehensive and scalable Nextflow annotation pipeline for prokaryotic assemblies by Tatiana A. Gurbich, Martín Beracochea, Nishadi De Silva, ROBERT FINN

    Published 2025
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  13. 13
    Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions

    Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions by Jaina Mistry, ROBERT FINN, Sean R. Eddy, Alex Bateman, Marco Punta

    Published 2013
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  14. 14
    Unsaturated fatty acid regulation of cytochrome P450 expression via a CAR-dependent pathway

    Unsaturated fatty acid regulation of cytochrome P450 expression via a CAR-dependent pathway by ROBERT FINN, Colin J. Henderson, Clare L. Scott, C. Roland Wolf

    Published 2008
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  15. 15
    Integrating sequence and structural biology with DAS

    Integrating sequence and structural biology with DAS by Andreas Prlić, Thomas A. Down, Eugene Kulesha, ROBERT FINN, Andreas Kähäri, Tim Hubbard

    Published 2007
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  16. 16
    Phospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factors

    Phospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factors by Alex Bateman, ROBERT FINN, Peter J. Sims, Therese Wiedmer, A. Biegert, Johannes Söding

    Published 2008
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  17. 17
    Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes

    Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes by Amit A. Upadhyay, Aaron D. Fleetwood, Ogün Adebalı, ROBERT FINN, Igor B. Zhulin

    Published 2016
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  18. 18
    The European Bioinformatics Institute in 2016: Data growth and integration

    The European Bioinformatics Institute in 2016: Data growth and integration by Charles E. Cook, Mary Todd Bergman, ROBERT FINN, Guy Cochrane, Ewan Birney, Rolf Apweiler

    Published 2015
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  19. 19
    HMMER web server: 2018 update

    HMMER web server: 2018 update by Simon Potter, Aurélien Luciani, Sean R. Eddy, Young Mi Park, Rodrigo López, ROBERT FINN

    Published 2018
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  20. 20
    The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database

    The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database by Neil D. Rawlings, A. John Barrett, Paul D. Thomas, Xiaosong Huang, Alex Bateman, ROBERT FINN

    Published 2017
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