Search Results - Quaid Morris

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  1. 1
    Fast integration of heterogeneous data sources for predicting gene function with limited annotation

    Fast integration of heterogeneous data sources for predicting gene function with limited annotation by Sara Mostafavi, Quaid Morris

    Published 2010
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  2. 2
    RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors

    RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors by Xiaoyu Chen, Timothy R. Hughes, Quaid Morris

    Published 2007
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  3. 3
    High-throughput characterization of protein-RNA interactions

    High-throughput characterization of protein-RNA interactions by Kate B. Cook, Timothy Hughes, Quaid Morris

    Published 2014
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  4. 4
    Multi-way clustering of microarray data using probabilistic sparse matrix factorization

    Multi-way clustering of microarray data using probabilistic sparse matrix factorization by Delbert Dueck, Quaid Morris, Brendan J. Frey

    Published 2005
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  5. 5
    QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq data

    QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq data by Kevin Ha, Benjamin J. Blencowe, Quaid Morris

    Published 2018
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  6. 6
    Enhancer identification in mouse embryonic stem cells using integrative modeling of chromatin and genomic features

    Enhancer identification in mouse embryonic stem cells using integrative modeling of chromatin and genomic features by Chih‐Yu Chen, Quaid Morris, Jennifer A. Mitchell

    Published 2012
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  7. 7
    Finding the target sites of <scp>RNA</scp>‐binding proteins

    Finding the target sites of <scp>RNA</scp>‐binding proteins by Xiao Li, Hilal Kazan, Howard D. Lipshitz, Quaid Morris

    Published 2013
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  8. 8
    Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure

    Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure by Xiao Li, Gerald Quon, Howard D. Lipshitz, Quaid Morris

    Published 2010
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  9. 9
    The Biologic Basis of Clinical Heterogeneity in Juvenile Idiopathic Arthritis

    The Biologic Basis of Clinical Heterogeneity in Juvenile Idiopathic Arthritis by Simon Eng, Trang T. Duong, Alan Rosenberg, Quaid Morris, Rae S. M. Yeung

    Published 2014
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  10. 10
    RBPDB: a database of RNA-binding specificities

    RBPDB: a database of RNA-binding specificities by Kate B. Cook, Hilal Kazan, Khalid Zuberi, Quaid Morris, Timothy Hughes

    Published 2010
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  11. 11
    GeneMANIA: Fast gene network construction and function prediction for Cytoscape

    GeneMANIA: Fast gene network construction and function prediction for Cytoscape by Jason Montojo, Khalid Zuberi, Harold Rodriguez, Gary D. Bader, Quaid Morris

    Published 2014
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  12. 12
    GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function

    GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function by Sara Mostafavi, Debajyoti Ray, David Warde-Farley, Chris Grouios, Quaid Morris

    Published 2008
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  13. 13
    RNAcontext: A New Method for Learning the Sequence and Structure Binding Preferences of RNA-Binding Proteins

    RNAcontext: A New Method for Learning the Sequence and Structure Binding Preferences of RNA-Binding Proteins by Hilal Kazan, Debashish Ray, Esther T. Chan, Timothy R. Hughes, Quaid Morris

    Published 2010
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  14. 14
    Inferring clonal evolution of tumors from single nucleotide somatic mutations

    Inferring clonal evolution of tumors from single nucleotide somatic mutations by Wei Jiao, Shankar Vembu, Amit G. Deshwar, Lincoln Stein, Quaid Morris

    Published 2014
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  15. 15
    Probing microRNAs with microarrays: Tissue specificity and functional inference

    Probing microRNAs with microarrays: Tissue specificity and functional inference by Tomas Babak, Wen Zhang, Quaid Morris, Benjamin J. Blencowe, Timothy R. Hughes

    Published 2004
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  16. 16
    PERT: A Method for Expression Deconvolution of Human Blood Samples from Varied Microenvironmental and Developmental Conditions

    PERT: A Method for Expression Deconvolution of Human Blood Samples from Varied Microenvironmental and Developmental Conditions by Wenlian Qiao, Gerald Quon, Elizabeth Csaszar, Mei Yu, Quaid Morris, Peter W. Zandstra

    Published 2012
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  17. 17
    Combined Total Genome Loss of Heterozygosity Scan of Breast Cancer Stroma and Epithelium Reveals Multiplicity of Stromal Targets

    Combined Total Genome Loss of Heterozygosity Scan of Breast Cancer Stroma and Epithelium Reveals Multiplicity of Stromal Targets by Koichi Fukino, Lei Shen, Satoshi Matsumoto, Quaid Morris, George L. Mutter, Charis Eng

    Published 2004
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  18. 18
    RNAcompete methodology and application to determine sequence preferences of unconventional RNA-binding proteins

    RNAcompete methodology and application to determine sequence preferences of unconventional RNA-binding proteins by Debashish Ray, Kevin Ha, Kate Nie, Hong Zheng, Timothy R. Hughes, Quaid Morris

    Published 2016
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  19. 19
    Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction

    Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction by Gerald Quon, Syed Haider, Amit G. Deshwar, Ang Cui, Paul C. Boutros, Quaid Morris

    Published 2013
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  20. 20
    Cytoscape Web: an interactive web-based network browser

    Cytoscape Web: an interactive web-based network browser by Christian Lopes, Max Franz, Farzana Kazi, Sylva L. Donaldson, Quaid Morris, Gary D. Bader

    Published 2010
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