Search Results - Paul T. Spellman

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  1. 1
    Evidence for large domains of similarly expressed genes in the Drosophila genome

    Evidence for large domains of similarly expressed genes in the Drosophila genome by Paul T. Spellman, Gerald M. Rubin

    Published 2002
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  2. 2
    GenomeGraphs: integrated genomic data visualization with R

    GenomeGraphs: integrated genomic data visualization with R by Steffen Durinck, James Bullard, Paul T. Spellman, Sandrine Dudoit

    Published 2009
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  3. 3
    Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt

    Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt by Steffen Durinck, Paul T. Spellman, Ewan Birney, Wolfgang Huber

    Published 2009
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  4. 4
    Genome-wide analysis of the <i>Drosophila</i> immune response by using oligonucleotide microarrays

    Genome-wide analysis of the <i>Drosophila</i> immune response by using oligonucleotide microarrays by Ennio De Gregorio, Paul T. Spellman, Gerald M. Rubin, Bruno Lemaître

    Published 2001
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  5. 5
    Cluster analysis and display of genome-wide expression patterns

    Cluster analysis and display of genome-wide expression patterns by Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein

    Published 1998
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  6. 6
    Non-random fragmentation patterns in circulating cell-free DNA reflect epigenetic regulation

    Non-random fragmentation patterns in circulating cell-free DNA reflect epigenetic regulation by Maxim Ivanov, Ancha Baranova, Timothy Butler, Paul T. Spellman, Vladislav Mileyko

    Published 2015
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  7. 7
    The Toll and Imd pathways are the major regulators of the immune response in Drosophila

    The Toll and Imd pathways are the major regulators of the immune response in Drosophila by Ennio De Gregorio, Paul T. Spellman, Phoebe Tzou, Gerald M. Rubin, Bruno Lemaître

    Published 2002
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  8. 8
    The MAPKKK Mekk1 regulates the expression of <i>Turandot</i> stress genes in response to septic injury in <i>Drosophila</i>

    The MAPKKK Mekk1 regulates the expression of <i>Turandot</i> stress genes in response to septic injury in <i>Drosophila</i> by Sylvain Brun, Sheila Vidal, Paul T. Spellman, Kuniaki Takahashi, Hervé Tricoire, Bruno Lemaître

    Published 2006
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  9. 9
    Physiologically activated mammary fibroblasts promote postpartum mammary cancer

    Physiologically activated mammary fibroblasts promote postpartum mammary cancer by Qiuchen Guo, Jessica Minnier, Julja Burchard, Kami Chiotti, Paul T. Spellman, Pepper Schedin

    Published 2017
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  10. 10
    Proliferative polyploid cells give rise to tumors via ploidy reduction

    Proliferative polyploid cells give rise to tumors via ploidy reduction by Tomonori Matsumoto, Leslie Wakefield, A. Mack Peters, Myron Peto, Paul T. Spellman, Markus Grompe

    Published 2021
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  11. 11
    Parent-specific copy number in paired tumor–normal studies using circular binary segmentation

    Parent-specific copy number in paired tumor–normal studies using circular binary segmentation by Adam B. Olshen, Henrik Bengtsson, Pierre Neuvial, Paul T. Spellman, Richard A. Olshen, Venkatraman Seshan

    Published 2011
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  12. 12
    <i>Drosophila</i> host defense after oral infection by an entomopathogenic <i>Pseudomonas</i> species

    <i>Drosophila</i> host defense after oral infection by an entomopathogenic <i>Pseudomonas</i> species by Nicolas Vodovar, Marisa Vinals, Peter Liehl, Alan Basset, Jéril Degrouard, Paul T. Spellman, Frédéric Boccard, Bruno Lemaître

    Published 2005
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  13. 13
    Morphometic analysis of TCGA glioblastoma multiforme

    Morphometic analysis of TCGA glioblastoma multiforme by Hang Chang, Gerald Fontenay, Ju Han, Ge Cong, Frederick L. Baehner, Joe W. Gray, Paul T. Spellman, Bahram Parvin

    Published 2011
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  14. 14
    Genomic Expression Programs in the Response of Yeast Cells to Environmental Changes

    Genomic Expression Programs in the Response of Yeast Cells to Environmental Changes by Audrey P. Gasch, Paul T. Spellman, Camilla M. Kao, Orna Carmel‐Harel, Michael B. Eisen, Gisela Storz, David Botstein, Patrick O. Brown

    Published 2000
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  15. 15
    Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast<i>Saccharomyces cerevisiae</i>by Microarray Hybridization

    Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast<i>Saccharomyces cerevisiae</i>by Microarray Hybridization by Paul T. Spellman, Gavin Sherlock, Michael Q. Zhang, Vishwanath R. Iyer, Kirk R. Anders, Michael B. Eisen, Patrick O. Brown, David Botstein, Bruce Futcher

    Published 1998
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  16. 16
    Bayesian Inference of Signaling Network Topology in a Cancer Cell Line

    Bayesian Inference of Signaling Network Topology in a Cancer Cell Line by Steven M. Hill, Yiling Lu, Jennifer R. Molina, Laura M. Heiser, Paul T. Spellman, Terence P. Speed, Joe W. Gray, Gordon B. Mills, Sach Mukherjee

    Published 2012
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  17. 17
    Neutral tumor evolution?

    Neutral tumor evolution? by Maxime Tarabichi, Iñigo Martincorena, Moritz Gerstung, Armand M. Leroi, Florian Markowetz, Paul T. Spellman, Quaid Morris, Ole Christian Lingjærde, David C. Wedge, Peter Van Loo

    Published 2018
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  18. 18
    Exome Sequencing of Cell-Free DNA from Metastatic Cancer Patients Identifies Clinically Actionable Mutations Distinct from Primary Disease

    Exome Sequencing of Cell-Free DNA from Metastatic Cancer Patients Identifies Clinically Actionable Mutations Distinct from Primary Disease by Timothy Butler, Katherine Johnson-Camacho, Myron Peto, Nicholas J. Wang, Tara A. Macey, James E. Korkola, Theresa M. Koppie, Christopher L. Corless, Joe W. Gray, Paul T. Spellman

    Published 2015
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  19. 19
    Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data

    Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data by Duanchen Sun, Xiangnan Guan, Amy E. Moran, Ling‐Yun Wu, David Z. Qian, Pepper Schedin, Mu‐Shui Dai, Alexey V. Danilov, Joshi J. Alumkal, Andrew Adey, Paul T. Spellman, Zheng Xia

    Published 2021
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  20. 20
    Analysis of molecular inversion probe performance for allele copy number determination

    Analysis of molecular inversion probe performance for allele copy number determination by Yuker Wang, Martin Moorhead, George Karlin‐Neumann, Nicholas J. Wang, James Ireland, Steven Lin, Chunnuan Chen, Laura M. Heiser, Koei Chin, Laura J. Esserman, Joe W. Gray, Paul T. Spellman, Malek Faham

    Published 2007
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