Resultados de procura - Patrick Chain

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  1. 1
    Challenges and opportunities in understanding microbial communities with metagenome assembly (accompanied by IPython Notebook tutorial)

    Challenges and opportunities in understanding microbial communities with metagenome assembly (accompanied by IPython Notebook tutorial) por Adina Howe, Patrick Chain

    Publicado 2015
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  2. 2
    Rapid evaluation and quality control of next generation sequencing data with FaQCs

    Rapid evaluation and quality control of next generation sequencing data with FaQCs por Chien‐Chi Lo, Patrick Chain

    Publicado 2014
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  3. 3
    Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs

    Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs por Matthew Scholz, Chien‐Chi Lo, Patrick Chain

    Publicado 2014
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  4. 4
    Advances and Challenges in Metatranscriptomic Analysis

    Advances and Challenges in Metatranscriptomic Analysis por Migun Shakya, Chien‐Chi Lo, Patrick Chain

    Publicado 2019
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  5. 5
    Accurate read-based metagenome characterization using a hierarchical suite of unique signatures

    Accurate read-based metagenome characterization using a hierarchical suite of unique signatures por Tracey Freitas, Po‐E Li, Matthew Scholz, Patrick Chain

    Publicado 2015
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  6. 6
    Standardized phylogenetic and molecular evolutionary analysis applied to species across the microbial tree of life

    Standardized phylogenetic and molecular evolutionary analysis applied to species across the microbial tree of life por Migun Shakya, Sanaa Ahmed, Karen W. Davenport, Mark Flynn, Chien‐Chi Lo, Patrick Chain

    Publicado 2020
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  7. 7
    The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate

    The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate por Natalie Donaher, Goro Tanifuji, Naoko T. Onodera, Stephanie Malfatti, Patrick Chain, Yoshiaki Hara, John M. Archibald

    Publicado 2009
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  8. 8
    Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing

    Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing por Gary Xie, Patrick Chain, Chien‐Chi Lo, Kuan-Liang Liu, Jason Gans, Justin Merritt, F. Qi

    Publicado 2010
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  9. 9
    Under-detection of endospore-forming Firmicutes in metagenomic data

    Under-detection of endospore-forming Firmicutes in metagenomic data por Sevasti Filippidou, Thomas Junier, Tina Wunderlin, Chien‐Chi Lo, Po-E Li, Patrick Chain, Pilar Junier

    Publicado 2015
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  10. 10
    The Genome Sequence of <i>Yersinia pestis</i> Bacteriophage φA1122 Reveals an Intimate History with the Coliphage T3 and T7 Genomes

    The Genome Sequence of <i>Yersinia pestis</i> Bacteriophage φA1122 Reveals an Intimate History with the Coliphage T3 and T7 Genomes por Emilio García García, Jeffrey M. Elliott, Erlan Ramanculov, Patrick Chain, May C. Chu, Ian J. Molineux

    Publicado 2003
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  11. 11
    MicroRNA in Pancreatic Cancer: From Biology to Therapeutic Potential

    MicroRNA in Pancreatic Cancer: From Biology to Therapeutic Potential por Manmeet Rawat, Kavita Kadian, Yash Gupta, Anand Kumar, Patrick Chain, Olga Kovbasnjuk, Suneel Kumar, Gulshan Parasher

    Publicado 2019
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  12. 12
    Identification of MglA-Regulated Genes Reveals Novel Virulence Factors in <i>Francisella tularensis</i>

    Identification of MglA-Regulated Genes Reveals Novel Virulence Factors in <i>Francisella tularensis</i> por Anna Brotcke, David S. Weiss, Charles C. Kim, Patrick Chain, Stephanie Malfatti, Emilio García García, Denise M. Monack

    Publicado 2006
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  13. 13
    Mapping the <i>Burkholderia cenocepacia</i> niche response via high-throughput sequencing

    Mapping the <i>Burkholderia cenocepacia</i> niche response via high-throughput sequencing por Deborah R. Yoder-Himes, Patrick Chain, Yiwen Zhu, Omri Wurtzel, Edward M. Rubin, James M. Tiedje, Rotem Sorek

    Publicado 2009
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  14. 14
    Draft Genome Sequence of Sorghum Grain Mold Fungus <i>Epicoccum sorghinum</i> , a Producer of Tenuazonic Acid

    Draft Genome Sequence of Sorghum Grain Mold Fungus <i>Epicoccum sorghinum</i> , a Producer of Tenuazonic Acid por Rodrigo Cardoso de Oliveira, Karen W. Davenport, Blake T. Hovde, Danilo R. Silva, Patrick Chain, Benedito Corrêa, Débora F. Rodrigues

    Publicado 2017
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  15. 15
    Complete Genome Sequence of <i>Yersinia pestis</i> Strains Antiqua and Nepal516: Evidence of Gene Reduction in an Emerging Pathogen

    Complete Genome Sequence of <i>Yersinia pestis</i> Strains Antiqua and Nepal516: Evidence of Gene Reduction in an Emerging Pathogen por Patrick Chain, Ping Hu, Stephanie Malfatti, Lyndsay Radnedge, Frank W. Larimer, Lisa M. Vergez, Patricia L. Worsham, May C. Chu, Gary L. Andersen

    Publicado 2006
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  16. 16
    Hi-C deconvolution of a human gut microbiome yields high-quality draft genomes and reveals plasmid-genome interactions

    Hi-C deconvolution of a human gut microbiome yields high-quality draft genomes and reveals plasmid-genome interactions por Maximilian O. Press, Andrew Wiser, Zev Kronenberg, Kyle W. Langford, Migun Shakya, Chien‐Chi Lo, Kathryn A. Mueller, Shawn Sullivan, Patrick Chain, Ivan Liachko

    Publicado 2017
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  17. 17
    Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7

    Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7 por Kerry K. Cooper, Robert E. Mandrell, Jacqueline W. Louie, Jonas Korlach, Tyson A. Clark, Craig T. Parker, Steven Huynh, Patrick Chain, Sanaa Ahmed, Michelle Qiu Carter

    Publicado 2014
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  18. 18
    Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform

    Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform por Po‐E Li, Chien‐Chi Lo, Joseph J. Anderson, Karen W. Davenport, Kimberly A. Bishop‐Lilly, Yan Xu, Sanaa Ahmed, Shihai Feng, Vishwesh Mokashi, Patrick Chain

    Publicado 2016
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  19. 19
    Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution

    Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution por Gang Tao, Steven Ahrendt, Shingo Miyauchi, Xia Zhu, Hao Peng, Kurt LaButti, Alicia Clum, Richard D. Hayes, Patrick Chain, Igor V. Grigoriev, Gregory Bonito, Francis Martin

    Publicado 2025
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  20. 20
    Saliva microbiomes distinguish caries-active from healthy human populations

    Saliva microbiomes distinguish caries-active from healthy human populations por Fang Yang, Xiaowei Zeng, Kang Ning, Kuan-Liang Liu, Chien‐Chi Lo, Wei Wang, Jie Chen, Dongmei Wang, Ranran Huang, Xingzhi Chang, Patrick Chain, Gary Xie, Junqi Ling, Jian Xu

    Publicado 2011
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