Výsledky vyhledávání - Orvis, Joshua

Transcript analysis of nrrF, a Fur repressed sRNA of Neisseria gonorrhoeae Autor Ducey, Thomas F., Jackson, Lydgia, Orvis, Joshua, Dyer, David W.

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Identification of the Iron-Responsive Genes of Neisseria gonorrhoeae by Microarray Analysis in Defined Medium Autor Ducey, Thomas F., Carson, Matthew B., Orvis, Joshua, Stintzi, Alain P., Dyer, David W.

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Transcriptional and Functional Analysis of the Neisseria gonorrhoeae Fur Regulon Autor Jackson, Lydgia A., Ducey, Thomas F., Day, Michael W., Zaitshik, Jeremy B., Orvis, Joshua, Dyer, David W.

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The IGS Standard Operating Procedure for Automated Prokaryotic Annotation Autor Galens, Kevin, Orvis, Joshua, Daugherty, Sean, Creasy, Heather H., Angiuoli, Sam, White, Owen, Wortman, Jennifer, Mahurkar, Anup, Giglio, Michelle Gwinn

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The genome sequence of four isolates from the family Lichtheimiaceae Autor Chibucos, Marcus C., Etienne, Kizee A., Orvis, Joshua, Lee, Hongkyu, Daugherty, Sean, Lockhart, Shawn R., Ibrahim, Ashraf S., Bruno, Vincent M.

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Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments Autor Haas, Brian J, Salzberg, Steven L, Zhu, Wei, Pertea, Mihaela, Allen, Jonathan E, Orvis, Joshua, White, Owen, Buell, C Robin, Wortman, Jennifer R

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Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities Autor Martin, John, Sykes, Sean, Young, Sarah, Kota, Karthik, Sanka, Ravi, Sheth, Nihar, Orvis, Joshua, Sodergren, Erica, Wang, Zhengyuan, Weinstock, George M., Mitreva, Makedonka

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Draft Genome Sequence of Mortierella alpina Isolate CDC-B6842 Autor Etienne, Kizee A., Chibucos, Marcus C., Su, Qi, Orvis, Joshua, Daugherty, Sean, Ott, Sandra, Sengamalay, Naomi A., Fraser, Claire M., Lockhart, Shawn R., Bruno, Vincent M.

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HMPDACC: a Human Microbiome Project Multi-omic data resource Autor Creasy, Heather Huot, Felix, Victor, Aluvathingal, Jain, Crabtree, Jonathan, Ifeonu, Olukemi, Matsumura, James, McCracken, Carrie, Nickel, Lance, Orvis, Joshua, Schor, Mike, Giglio, Michelle, Mahurkar, Anup, White, Owen

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The TIGR Rice Genome Annotation Resource: improvements and new features Autor Ouyang, Shu, Zhu, Wei, Hamilton, John, Lin, Haining, Campbell, Matthew, Childs, Kevin, Thibaud-Nissen, Françoise, Malek, Renae L., Lee, Yuandan, Zheng, Li, Orvis, Joshua, Haas, Brian, Wortman, Jennifer, Buell, C. Robin

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The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations Autor Cerqueira, Gustavo C., Arnaud, Martha B., Inglis, Diane O., Skrzypek, Marek S., Binkley, Gail, Simison, Matt, Miyasato, Stuart R., Binkley, Jonathan, Orvis, Joshua, Shah, Prachi, Wymore, Farrell, Sherlock, Gavin, Wortman, Jennifer R.

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The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community Autor Arnaud, Martha B., Chibucos, Marcus C., Costanzo, Maria C., Crabtree, Jonathan, Inglis, Diane O., Lotia, Adil, Orvis, Joshua, Shah, Prachi, Skrzypek, Marek S., Binkley, Gail, Miyasato, Stuart R., Wortman, Jennifer R., Sherlock, Gavin

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Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys Autor Ioannidis, Panagiotis, Lu, Yong, Kumar, Nikhil, Creasy, Todd, Daugherty, Sean, Chibucos, Marcus C, Orvis, Joshua, Shetty, Amol, Ott, Sandra, Flowers, Melissa, Sengamalay, Naomi, Tallon, Luke J, Pick, Leslie, Hotopp, Julie C Dunning

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Ergatis: a web interface and scalable software system for bioinformatics workflows Autor Orvis, Joshua, Crabtree, Jonathan, Galens, Kevin, Gussman, Aaron, Inman, Jason M., Lee, Eduardo, Nampally, Sreenath, Riley, David, Sundaram, Jaideep P., Felix, Victor, Whitty, Brett, Mahurkar, Anup, Wortman, Jennifer, White, Owen, Angiuoli, Samuel V.

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Re-annotation of the Theileria parva genome refines 53% of the proteome and uncovers essential components of N-glycosylation, a conserved pathway in many organisms Autor Tretina, Kyle, Pelle, Roger, Orvis, Joshua, Gotia, Hanzel T., Ifeonu, Olukemi O., Kumari, Priti, Palmateer, Nicholas C., Iqbal, Shaikh B. A., Fry, Lindsay M., Nene, Vishvanath M., Daubenberger, Claudia A., Bishop, Richard P., Silva, Joana C.

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Characterization of the development of the mouse cochlear epithelium at the single cell level Autor Kolla, Likhitha, Kelly, Michael C., Mann, Zoe F., Anaya-Rocha, Alejandro, Ellis, Kathryn, Lemons, Abigail, Palermo, Adam T., So, Kathy S., Mays, Joseph C., Orvis, Joshua, Burns, Joseph C., Hertzano, Ronna, Driver, Elizabeth C., Kelley, Matthew W.

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Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 an... Autor Ifeonu, Olukemi O., Chibucos, Marcus C., Orvis, Joshua, Su, Qi, Elwin, Kristin, Guo, Fengguang, Zhang, Haili, Xiao, Lihua, Sun, Mingfei, Chalmers, Rachel M., Fraser, Claire M., Zhu, Guan, Kissinger, Jessica C., Widmer, Giovanni, Silva, Joana C.

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Strains, functions and dynamics in the expanded Human Microbiome Project Autor Lloyd-Price, Jason, Mahurkar, Anup, Rahnavard, Gholamali, Crabtree, Jonathan, Orvis, Joshua, Hall, A. Brantley, Brady, Arthur, Creasy, Heather H., McCracken, Carrie, Giglio, Michelle G., McDonald, Daniel, Franzosa, Eric A., Knight, Rob, White, Owen, Huttenhower, Curtis

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Erratum: Strains, functions and dynamics in the expanded Human Microbiome Project Autor Lloyd-Price, Jason, Mahurkar, Anup, Rahnavard, Gholamali, Crabtree, Jonathan, Orvis, Joshua, Hall, A. Brantley, Brady, Arthur, Creasy, Heather H., McCracken, Carrie, Giglio, Michelle G., McDonald, Daniel, Franzosa, Eric A., Knight, Rob, White, Owen, Huttenhower, Curtis

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The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of Aplysia Autor Orvis, Joshua, Albertin, Caroline B., Shrestha, Pragya, Chen, Shuangshuang, Zheng, Melanie, Rodriguez, Cheyenne J., Tallon, Luke J., Mahurkar, Anup, Zimin, Aleksey V., Kim, Michelle, Liu, Kelvin, Kandel, Eric R., Fraser, Claire M., Sossin, Wayne, Abrams, Thomas W.

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