Hakutulokset - Nina Thiessen

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  1. 1
    JAGuaR: Junction Alignments to Genome for RNA-Seq Reads

    JAGuaR: Junction Alignments to Genome for RNA-Seq Reads Tekijä Yaron S.N. Butterfield, Maayan Kreitzman, Nina Thiessen, Richard Corbett, Yisu Li, Johnson Pang, P. Yussanne, Steven J.M. Jones, İnanç Birol

    Julkaistu 2014
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  2. 2
    Bromodomain-containing Protein 4 (BRD4) Regulates RNA Polymerase II Serine 2 Phosphorylation in Human CD4+ T Cells

    Bromodomain-containing Protein 4 (BRD4) Regulates RNA Polymerase II Serine 2 Phosphorylation in Human CD4+ T Cells Tekijä Zhang Weishi, Celine Prakash, Calvin Sum, Yue Gong, Yinghui Li, Jeffrey Jun Ting Kwok, Nina Thiessen, Sven Pettersson, Steven J.M. Jones, Stefan Knapp, Henry Yang, Keh-Chuang Chin

    Julkaistu 2012
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  3. 3
    SDHA Loss-of-Function Mutations in KIT-PDGFRA Wild-Type Gastrointestinal Stromal Tumors Identified by Massively Parallel Sequencing

    SDHA Loss-of-Function Mutations in KIT-PDGFRA Wild-Type Gastrointestinal Stromal Tumors Identified by Massively Parallel Sequencing Tekijä Maria A. Pantaleo, Annalisa Astolfi, Valentina Indio, Richard A. Moore, Nina Thiessen, Michael C. Heinrich, C. Gnocchi, Donatella Santini, Fausto Catena, Serena Formica, Pier Luigi Martelli, Rita Casadio, Andrea Pession, Guido Biasco

    Julkaistu 2011
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  4. 4
    Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

    Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing Tekijä Elizabeth D. Wederell, Mikhail Bilenky, Rebecca Cullum, Nina Thiessen, Melis Dagpinar, Allen Delaney, Richard Varhol, Yongjun Zhao, Thomas Zeng, Bridget Bernier, Matthew Ingham, Martin Hirst, Gordon Robertson, Marco A. Marra, Steven J.M. Jones, Pamela A. Hoodless

    Julkaistu 2008
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  5. 5
    Hippo Signaling Influences HNF4A and FOXA2 Enhancer Switching during Hepatocyte Differentiation

    Hippo Signaling Influences HNF4A and FOXA2 Enhancer Switching during Hepatocyte Differentiation Tekijä Olivia Alder, Rebecca Cullum, Sam Lee, Arohumam Kan, Wei Wei, Yuyin Yi, Victoria C. Garside, Misha Bilenky, Malachi Griffith, A. Sorana Morrissy, Gordon Robertson, Nina Thiessen, Yongjun Zhao, Qian Chen, Duojia Pan, Steven J.M. Jones, Marco A. Marra, Pamela A. Hoodless

    Julkaistu 2014
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  6. 6
    Identification and characterization of Hoxa9 binding sites in hematopoietic cells

    Identification and characterization of Hoxa9 binding sites in hematopoietic cells Tekijä Yongsheng Huang, Kajal Sitwala, Joel C. Bronstein, Daniel Steven Sanders, Monisha Dandekar, Cailin Collins, Gordon Robertson, James W. MacDonald, Timothée Cezard, Misha Bilenky, Nina Thiessen, Yongjun Zhao, Thomas Zeng, Martin Hirst, Alfred O. Hero, Steven J.M. Jones, Jay L. Hess

    Julkaistu 2011
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  7. 7
    Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding

    Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding Tekijä A. Gordon Robertson, Mikhail Bilenky, Angela Tam, Yongjun Zhao, Thomas Zeng, Nina Thiessen, Timothée Cezard, Anthony P. Fejes, Elizabeth D. Wederell, Rebecca Cullum, Ghia Euskirchen, Martin Krzywinski, İnanç Birol, M Snyder, Pamela A. Hoodless, Martin Hirst, Marco A. Marra, Steven J.M. Jones

    Julkaistu 2008
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  8. 8
    Identification and analysis of murine pancreatic islet enhancers

    Identification and analysis of murine pancreatic islet enhancers Tekijä Bryan Tennant, A. Gordon Robertson, Marabeth M. Kramer, Leping Li, Xuekui Zhang, Miami Beach, Nina Thiessen, Readman Chiu, Karen Mungall, Cheryl J. Whiting, Paul V. Sabatini, Appl Kim, Raphaël Gottardo, Marco A. Marra, Francis C. Lynn, Steven J.M. Jones, Pamela A. Hoodless, Brad G. Hoffman

    Julkaistu 2012
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  9. 9
    Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver

    Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver Tekijä Brad G. Hoffman, Gordon Robertson, Bogard Zavaglia, Mike Beach, Rebecca Cullum, Sam Lee, Galina Soukhatcheva, Leping Li, Elizabeth D. Wederell, Nina Thiessen, Mikhail Bilenky, Timothée Cezard, Angela Tam, Baljit Kamoh, İnanç Birol, Derek L. Dai, Yongjun Zhao, Martin Hirst, C. Bruce Verchere, Cheryl D. Helgason, Marco A. Marra, Steven J.M. Jones, Pamela A. Hoodless

    Julkaistu 2010
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  10. 10
    Cell of Origin in AML: Susceptibility to MN1-Induced Transformation Is Regulated by the MEIS1/AbdB-like HOX Protein Complex

    Cell of Origin in AML: Susceptibility to MN1-Induced Transformation Is Regulated by the MEIS1/AbdB-like HOX Protein Complex Tekijä Michael Heuser, Haiyang Yun, Tobias Berg, Eric Yung, Bob Argiropoulos, Florian Kuchenbauer, Gyeongsin Park, Iyas Hamwi, Lars Palmqvist, Courteney K. Lai, Malina Leung, Grace Lin, Anuhar Chaturvedi, Basant Kumar Thakur, Masayuki Iwasaki, Mikhail Bilenky, Nina Thiessen, Gordon Robertson, Martin Hirst, David G. Kent, Nicola K. Wilson, Berthold Göttgens, Connie J. Eaves, Michael L. Cleary, Marco A. Marra, Arnold Ganser, R. Keith Humphries

    Julkaistu 2011
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  11. 11
    Conserved role of intragenic DNA methylation in regulating alternative promoters

    Conserved role of intragenic DNA methylation in regulating alternative promoters Tekijä Alika K. Maunakea, Raman P. Nagarajan, Mikhail Bilenky, Tracy Ballinger, Cletus A. D’Souza, Shaun D. Fouse, Brett Johnson, Chibo Hong, Cydney Nielsen, Yongjun Zhao, Gustavo Turecki, Allen Delaney, Richard Varhol, Nina Thiessen, Ksenya Shchors, Vivi M. Heine, David H. Rowitch, Xiaoyun Xing, Chris Fiore, Maximiliaan Schillebeeckx, Steven J.M. Jones, David Haussler, Marco A. Marra, Martin Hirst, Ting Wang, J Costello

    Julkaistu 2010
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  12. 12
    miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer

    miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer Tekijä Yinghong Pan, Gordon Robertson, Lykke Pedersen, Emilia L. Lim, Anadulce Hernández-Herrera, Amy C. Rowat, Sagar L. Patil, Clara Chan, Yunfei Wen, Xinna Zhang, Upal Basu-Roy, Alka Mansukhani, Andy Chu, Payal Sipahimalani, Reanne Bowlby, Denise Brooks, Nina Thiessen, Cristian Coarfa, Yussanne Ma, Richard A. Moore, Jacquie Schein, Andrew J. Mungall, Jinsong Liu, Chad V. Pecot, Anil K. Sood, Steven J.M. Jones, Marco A. Marra, Preethi H. Gunaratne

    Julkaistu 2016
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  13. 13
    Genome-Wide Profiles of Extra-cranial Malignant Rhabdoid Tumors Reveal Heterogeneity and Dysregulated Developmental Pathways

    Genome-Wide Profiles of Extra-cranial Malignant Rhabdoid Tumors Reveal Heterogeneity and Dysregulated Developmental Pathways Tekijä Hye-Jung Chun, Emilia L. Lim, Alireza Heravi‐Moussavi, Saeed Saberi, Karen Mungall, Mikhail Bilenky, Annaïck Carles, Kane Tse, Inna Shlafman, Kelsey Zhu, Jenny Q. Qian, Diana Palmquist, Anyuan He, William D. Long, Rodrigo Goya, Michelle Ng, Véronique G. LeBlanc, Erin Pleasance, Nina Thiessen, Tina Wong, Eric Chuah, Yong-Jun Zhao, Jacquie Schein, Daniela S. Gerhard, Michael D. Taylor, Andrew J. Mungall, Richard A. Moore, Yussanne Ma, Steven J.M. Jones, Elizabeth J. Perlman, Martin Hirst, Marco A. Marra

    Julkaistu 2016
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  14. 14
    Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors

    Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors Tekijä Steven J.M. Jones, Janessa Laskin, Yvonne Y. Li, Obi L. Griffith, Jianghong An, Mikhail Bilenky, Yaron S.N. Butterfield, Timothée Cezard, Eric Chuah, Richard Corbett, Anthony P. Fejes, Malachi Griffith, John Yee, Montgomery Martin, Michael Mayo, Nataliya Melnyk, Ryan D. Morin, Trevor J. Pugh, Tesa Severson, Sohrab P. Shah, Margaret Sutcliffe, Angela Tam, Jefferson Terry, Nina Thiessen, Thomas A. Thomson, Richard Varhol, Thomas Zeng, Yongjun Zhao, Richard A. Moore, David G. Huntsman, İnanç Birol, Martin Hirst, Robert A. Holt, Marco A. Marra

    Julkaistu 2010
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  15. 15
    Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer

    Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer Tekijä Eric Y. Stutheit-Zhao, Yaoqing Shen, Erin Pleasance, L. Sylvia, Sreeja Leelakumari, Martin Jones, Pinaki Bose, Carolyn Ch’ng, Caralyn Reisle, Peter Eirew, Richard Corbett, Karen Mungall, Nina Thiessen, Yussanne Ma, Jacqueline E. Schein, Andrew J. Mungall, Yongjun Zhao, Richard A. Moore, Wendie Den Brok, Sheridan Wilson, Diego Villa, Tamara Shenkier, Caroline Lohrisch, Stephen Chia, Stephen Yip, Karen A. Gelmon, Howard J. Lim, Daniel J. Renouf, Sophie Sun, Kasmintan A. Schrader, Sean Young, Ian Bosdet, Aly Karsan, Janessa Laskin, Marco A. Marra, Steven J.M. Jones

    Julkaistu 2017
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  16. 16
    Concurrent <i>CIC</i> mutations, <i>IDH</i> mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers

    Concurrent <i>CIC</i> mutations, <i>IDH</i> mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers Tekijä Stephen Yip, Yaron S.N. Butterfield, Olena Morozova, Suganthi Chittaranjan, Michael Blough, Jianghong An, İnanç Birol, Charles Chesnelong, Readman Chiu, Eric Chuah, Richard Corbett, Roderick Docking, Marlo Firme, Martin Hirst, Shaun D. Jackman, Aly Karsan, Haiyan Li, David N. Louis, Alexandra Maslova, Richard A. Moore, Annie Moradian, Karen Mungall, Marco Perizzolo, Jenny Q. Qian, Glòria Roldán, Eric E. Smith, Jessica Tamura‐Wells, Nina Thiessen, Richard Varhol, Samuel Weiss, Wei Wu, Sean Young, Yongjun Zhao, Andrew J. Mungall, Steven J.M. Jones, Gregg B. Morin, Jennifer A. Chan, J. Gregory Cairncross, Marco A. Marra

    Julkaistu 2011
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  17. 17
    Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma

    Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma Tekijä Richard P. Koche, Elias Rodríguez-Fos, Konstantin Helmsauer, Martin Burkert, Ian C. MacArthur, Jesper L.V. Mååg, Rocío Chamorro González, Natalia Muñoz Perez, Montserrat Puiggròs, Heathcliff Dorado García, Yi Bei, Claudia Röefzaad, Victor Bardinet, Annabell Szymansky, Annika Winkler, Theresa Thole, Natalie Timme, Katharina Kasack, Steffen Fuchs, Filippos Klironomos, Nina Thiessen, Eric Blanc, Karin Schmelz, Annette Künkele, Patrick Hundsdörfer, Carolina Rosswog, Jessica Theißen, Dieter Beule, Hedwig E. Deubzer, Sascha Sauer, Joern Toedling, Matthias Fischer, Falk Hertwig, Roland F. Schwarz, Angelika Eggert, David Torrents, Johannes H. Schulte, Anton G. Henssen

    Julkaistu 2019
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  18. 18
    Sporadic Early-Onset Diffuse Gastric Cancers Have High Frequency of Somatic CDH1 Alterations, but Low Frequency of Somatic RHOA Mutations Compared With Late-Onset Cancers

    Sporadic Early-Onset Diffuse Gastric Cancers Have High Frequency of Somatic CDH1 Alterations, but Low Frequency of Somatic RHOA Mutations Compared With Late-Onset Cancers Tekijä Soo Young Cho, Jun Won Park, Yang Liu, Young Soo Park, Ju Hee Kim, Hanna Yang, Hyejin Um, Woo Ri Ko, Byung Il Lee, Sun Young Kwon, Seung Wan Ryu, Chae Hwa Kwon, Do Youn Park, Jae-Hyuk Lee, Sang Il Lee, Kyu Sang Song, Hoon Hur, Sang‐Uk Han, Hee‐Kyung Chang, Su‐jin Kim, Byung Sik Kim, Jeong Hwan Yook, Moon‐Won Yoo, Beom Su Kim, In‐Seob Lee, Myeong‐Cherl Kook, Nina Thiessen, Anyuan He, Chip Stewart, Andrew Dunford, Jaegil Kim, Juliann Shih, Gordon Saksena, Andrew D. Cherniack, Steven E. Schumacher, Amaro-Taylor Weiner, Mara Rosenberg, Gad Getz, Eun Gyeong Yang, Min‐Hee Ryu, Adam J. Bass, Hark Kyun Kim

    Julkaistu 2017
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  19. 19
    The genetic landscape of high-risk neuroblastoma

    The genetic landscape of high-risk neuroblastoma Tekijä Trevor J. Pugh, Olena Morozova, Edward F. Attiyeh, Shahab Asgharzadeh, Jun S. Wei, Daniel Auclair, Scott L. Carter, Kristian Cibulskis, Megan Hanna, Adam Kieżun, Jaegil Kim, Michael S. Lawrence, Lee Lichenstein, Aaron McKenna, Chandra Sekhar Pedamallu, Alex H. Ramos, Erica Shefler, Andrey Sivachenko, Carrie Sougnez, Chip Stewart, Adrian Ally, İnanç Birol, Readman Chiu, Richard Corbett, Martin Hirst, Shaun D. Jackman, Baljit Kamoh, Alireza Hadj Khodabakshi, Martin Krzywinski, Allan Lo, Richard A. Moore, Karen Mungall, Jenny Q. Qian, Angela Tam, Nina Thiessen, Yongjun Zhao, Kristina A. Cole, Maura Diamond, Sharon J. Diskin, Yaël P. Mossé, Andrew Wood, Lingyun Ji, Richard Sposto, Thomas Badgett, Wendy B. London, Yvonne Moyer, Julie M. Gastier‐Foster, Malcolm A. Smith, Jaime M. Guidry Auvil, Daniela S. Gerhard, Michael D. Hogarty, Steven J.M. Jones, Eric S. Lander, Stacey Gabriel, Gad Getz, Robert C. Seeger, Javed Khan, Marco A. Marra, Matthew Meyerson, John M. Maris

    Julkaistu 2013
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  20. 20
    Spatial heterogeneity in medulloblastoma

    Spatial heterogeneity in medulloblastoma Tekijä A. Sorana Morrissy, Florence M.G. Cavalli, Marc Remke, Vijay Ramaswamy, David Shih, Borja Holgado, Hamza Farooq, Laura Donovan, Livia Garzia, Sameer Agnihotri, Erin N. Kiehna, Eloi Mercier, Chelsea Mayoh, Simon Papillon‐Cavanagh, Hamid Nikbakht, Tenzin Gayden, Jonathon Torchia, Daniel Picard, Diana M. Merino, Maria C. Vladoiu, Betty Luu, Xiaochong Wu, Craig Daniels, Stuart Horswell, Yuan Thompson, Volker Hovestadt, Paul A. Northcott, David Jones, John Peacock, Xin Wang, Stephen C. Mack, Jüri Reimand, Steffen Albrecht, Adam M. Fontebasso, Nina Thiessen, Yisu Li, Jacqueline E. Schein, Darlene Lee, Rebecca Carlsen, Michael Mayo, Kane Tse, Angela Tam, Noreen Dhalla, Adrian Ally, Eric Chuah, Young Cheng, Patrick Plettner, Haiyan I. Li, Richard Corbett, Tina Wong, William D. Long, James Loukides, Pawel Buczkowicz, Cynthia Hawkins, Uri Tabori, Brian R. Rood, John S. Myseros, Roger J. Packer, Andrey Korshunov, Peter Lichter, Marcel Kool, Stefan M. Pfister, Ulrich Schüller, Peter B. Dirks, Annie Huang, Éric Bouffet, James T. Rutka, Gary D. Bader, Charles Swanton, Yusanne Ma, Richard A. Moore, Andrew J. Mungall, Jacek Majewski, Steven J.M. Jones, Sunit Das, David Malkin, Nada Jabado, Marco A. Marra, Michael D. Taylor

    Julkaistu 2017
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