Torthaí cuardaigh - Nicholas A. Sinnott‐Armstrong

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  1. 1
    Characterizing genetic interactions in human disease association studies using statistical epistasis networks

    Characterizing genetic interactions in human disease association studies using statistical epistasis networks de réir Ting Hu, Nicholas A. Sinnott‐Armstrong, Jeff Kiralis, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore

    Foilsithe / Cruthaithe 2011
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  2. 2
    GAMETES: a fast, direct algorithm for generating pure, strict, epistatic models with random architectures

    GAMETES: a fast, direct algorithm for generating pure, strict, epistatic models with random architectures de réir Ryan J. Urbanowicz, Jeff Kiralis, Nicholas A. Sinnott‐Armstrong, Heberling Tamra, Jonathan Fisher, Jason H. Moore

    Foilsithe / Cruthaithe 2012
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  3. 3
    Multifactor dimensionality reduction for graphics processing units enables genome-wide testing of epistasis in sporadic ALS

    Multifactor dimensionality reduction for graphics processing units enables genome-wide testing of epistasis in sporadic ALS de réir Casey S. Greene, Nicholas A. Sinnott‐Armstrong, Daniel Himmelstein, Paul J. Park, Jason H. Moore, Brent T. Harris

    Foilsithe / Cruthaithe 2010
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  4. 4
    Long-range single-molecule mapping of chromatin accessibility in eukaryotes

    Long-range single-molecule mapping of chromatin accessibility in eukaryotes de réir Zohar Shipony, Georgi K. Marinov, Matthew P. Swaffer, Nicholas A. Sinnott‐Armstrong, Jan M. Skotheim, Anshul Kundaje, William J. Greenleaf

    Foilsithe / Cruthaithe 2020
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  5. 5
    Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells

    Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells de réir Bogdan Bintu, Leslie J. Mateo, Jun-Han Su, Nicholas A. Sinnott‐Armstrong, Mirae Parker, Seon Kinrot, Kei Yamaya, Alistair N. Boettiger, Xiaowei Zhuang

    Foilsithe / Cruthaithe 2018
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  6. 6
    Pan-cancer screen for mutations in non-coding elements with conservation and cancer specificity reveals correlations with expression and survival

    Pan-cancer screen for mutations in non-coding elements with conservation and cancer specificity reveals correlations with expression and survival de réir Henrik Hornshøj, Morten Muhlig Nielsen, Nicholas A. Sinnott‐Armstrong, Michał Świtnicki, Malene Juul, Tobias Madsen, Richard Sallari, Manolis Kellis, Torben Ørntoft, Asger Hobolth, Jakob Skou Pedersen

    Foilsithe / Cruthaithe 2018
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  7. 7
    Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer

    Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer de réir Swneke D. Bailey, Kinjal Desai, Ken J. Kron, Parisa Mazrooei, Nicholas A. Sinnott‐Armstrong, Aislinn E. Treloar, Mark Dowar, Kelsie L. Thu, David W. Cescon, Jennifer Silvester, S.Y. Cindy Yang, Xue Wu, Rossanna C. Pezo, Benjamin Haibe‐Kains, Tak W. Mak, Philippe L. Bédard, Trevor J. Pugh, Richard Sallari, Mathieu Lupien

    Foilsithe / Cruthaithe 2016
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  8. 8
    Predicting gene expression in massively parallel reporter assays: A comparative study

    Predicting gene expression in massively parallel reporter assays: A comparative study de réir Anat Kreimer, Haoyang Zeng, Matthew D. Edwards, Yuchun Guo, Kevin Tian, Sunyoung Shin, Rene Welch, Michael Wainberg, Rahul Mohan, Nicholas A. Sinnott‐Armstrong, Yue Li, Gökçen Eraslan, Talal Bin Amin, Ryan Tewhey, Pardis C. Sabeti, Jonathan Göke, Nikola S. Mueller, Manolis Kellis, Anshul Kundaje, M Beer, Sündüz Keleş, David K. Gifford, Nir Yosef

    Foilsithe / Cruthaithe 2017
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  9. 9
    An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues

    An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues de réir M. Ryan Corces, Alexandro E. Trevino, Emily G. Hamilton, Peyton Greenside, Nicholas A. Sinnott‐Armstrong, Sam Vesuna, Ansuman T. Satpathy, Adam J. Rubin, Kathleen S. Montine, Beijing Wu, Arwa S. Kathiria, Seung Woo Cho, Maxwell R. Mumbach, Ava C. Carter, Maya Kasowski, Lisa A. Orloff, Viviana I. Risca, Anshul Kundaje, Paul A. Khavari, Thomas J. Montine, William J. Greenleaf, Howard Y. Chang

    Foilsithe / Cruthaithe 2017
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  10. 10
    Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

    Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes de réir Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Grace Tiao, Henrik Hornshøj, Julian M. Hess, Randi Istrup Pedersen, Lars Feuerbach, Radhakrishnan Sabarinathan, Tobias Madsen, Jaegil Kim, Loris Mularoni, Shimin Shuai, Andrés Lanzós, Carl Herrmann, Yosef E. Maruvka, Ciyue Shen, Samirkumar B. Amin, Johanna Bertl, Priyanka Dhingra, Klev Diamanti, Abel González-Pérez, Qianyun Guo, Nicholas J. Haradhvala, Keren Isaev, Malene Juul, Jan Komorowski, Sushant Kumar, Donghoon Lee, Lucas Lochovsky, Eric Minwei Liu, Oriol Pich, David Tamborero, Husen M. Umer, Liis Uusküla-Reimand, Claes Wadelius, Lina Wadi, Jing Zhang, Keith A. Boroevich, Joana Carlevaro-Fita, Dimple Chakravarty, Calvin Wing Yiu Chan, Nuno A. Fonseca, Mark P. Hamilton, Chen Hong, André Kahles, Young-Wook Kim, Kjong-Van Lehmann, Todd A. Johnson, Abdullah Kahraman, Keunchil Park, Gordon Saksena, Lina Sieverling, Nicholas A. Sinnott‐Armstrong, Peter J. Campbell, Asger Hobolth, Manolis Kellis, Michael S. Lawrence, Benjamin J. Raphael, Mark A. Rubin, Chris Sander, Lincoln Stein, Joshua M. Stuart, Tatsuhiko Tsunoda, David A. Wheeler, Rory Johnson, Jüri Reimand, Mark Gerstein, Ekta Khurana, Núria López-Bigas, Iñigo Martincorena, Jakob Skou Pedersen, Gad Getz

    Foilsithe / Cruthaithe 2017
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  11. 11
    Integrative analysis of 111 reference human epigenomes

    Integrative analysis of 111 reference human epigenomes de réir Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi‐Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald Quon, Richard Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaïck Carles, Jesse R. Dixon, Kai-How Farh, Soheil Feizi, Rosa Karlić, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard Sallari, Kyle Siebenthall, Nicholas A. Sinnott‐Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy Farnham, Susan J. Fisher, David Haussler, Steven J.M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil Sunyaev, James A. Thomson, Thea D. Tlsty, Linus Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, B Bernstein, J Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljević, Bing Ren, J Stamatoyannopoulos, Ting Wang, Manolis Kellis

    Foilsithe / Cruthaithe 2015
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  12. 12
    Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170

    Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170 de réir Alison M. Dunning, Kyriaki Michailidou, Karoline Kuchenbaecker, Deborah J. Thompson, Juliet D. French, Jonathan Beesley, Catherine S. Healey, Siddhartha Kar, Karen A. Pooley, Elena López‐Knowles, Ed Dicks, Daniel Barrowdale, Nicholas A. Sinnott‐Armstrong, Richard Sallari, Kristine M. Hillman, Susanne Kaufmann, Haran Sivakumaran, Mahdi Moradi Marjaneh, Jason S. Lee, Margaret Hills, Monika Jarosz, Suzie Drury, Sander Canisius, Manjeet K. Bolla, Joe Dennis, Sophia Wang, John L. Hopper, Melissa C. Southey, Annegien Broeks, Marjanka K. Schmidt, Artitaya Lophatananon, Kenneth Muir, Matthias W. Beckmann, Peter A. Fasching, Isabel dos–Santos–Silva, Julian Peto, Elinor J. Sawyer, Ian Tomlinson, Barbara Burwinkel, Frederik Marmé, Pascal Guénel, Thérèse Truong, Stig E. Bojesen, Henrik Flyger, Anna González‐Neira, José Ignacio Arias Pérez, Hoda Anton‐Culver, Eunjung Lee, Volker Arndt, Hermann Brenner, Alfons Meindl, Rita K. Schmutzler, Hiltrud Brauch, Ute Hamann, Kristiina Aittomäki, Carl Blomqvist, Hidemi Ito, Keitaro Matsuo, Н.В. Богданова, Thilo Dörk, Annika Lindblom, Sara Margolin, Veli‐Matti Kosma, Graham J. Mann, Chiu-Chen Tseng, Anna H. Wu, Diether Lambrechts, Hans Wildiers, Jenny Chang‐Claude, Anja Rudolph, Paolo Peterlongo, Paolo Radice, Janet E. Olson, Graham G. Giles, Roger L. Milne, Christopher A. Haiman, Brian E. Henderson, Mark S. Goldberg, Soo‐Hwang Teo, Cheng Har Yip, Silje Nord, Anne‐Lise Børresen‐Dale, Vessela Kristensen, Jirong Long, Wei Zheng, Katri Pylkäs, Robert Winqvist, Irene L. Andrulis, Julia A. Knight, Peter Devilee, Caroline Seynaeve, Jonine D. Figueroa, Mark E. Sherman, Kamila Czene, Hatef Darabi, Antoinette Hollestelle, Ans M.W. van den Ouweland, Keith Humphreys, Yu‐Tang Gao, Xiao‐Ou Shu

    Foilsithe / Cruthaithe 2016
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