Search Results - Nicholas, Thomas J

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  1. 1
    A high-resolution integrated map of copy number polymorphisms within and between breeds of the modern domesticated dog

    A high-resolution integrated map of copy number polymorphisms within and between breeds of the modern domesticated dog by Nicholas, Thomas J, Baker, Carl, Eichler, Evan E, Akey, Joshua M

    Published 2011
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  2. 2
    The genomic architecture of segmental duplications and associated copy number variants in dogs

    The genomic architecture of segmental duplications and associated copy number variants in dogs by Nicholas, Thomas J., Cheng, Ze, Ventura, Mario, Mealey, Katrina, Eichler, Evan E., Akey, Joshua M.

    Published 2009
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  3. 3
    OncoGEMINI: software for investigating tumor variants from multiple biopsies with integrated cancer annotations

    OncoGEMINI: software for investigating tumor variants from multiple biopsies with integrated cancer annotations by Nicholas, Thomas J., Cormier, Michael J., Huang, Xiaomeng, Qiao, Yi, Marth, Gabor T., Quinlan, Aaron R.

    Published 2021
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  4. 4
    Tracking footprints of artificial selection in the dog genome

    Tracking footprints of artificial selection in the dog genome by Akey, Joshua M., Ruhe, Alison L., Akey, Dayna T., Wong, Aaron K., Connelly, Caitlin F., Madeoy, Jennifer, Nicholas, Thomas J., Neff, Mark W.

    Published 2010
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  5. 5
    Automated analysis of embryonic gene expression with cellular resolution in C. elegans

    Automated analysis of embryonic gene expression with cellular resolution in C. elegans by Murray, John Isaac, Bao, Zhirong, Boyle, Thomas J., Boeck, Max E., Mericle, Barbara L., Nicholas, Thomas J., Zhao, Zhongying, Sandel, Matthew J., Waterston, Robert H.

    Published 2008
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  6. 6
    SV-plaudit: A cloud-based framework for manually curating thousands of structural variants

    SV-plaudit: A cloud-based framework for manually curating thousands of structural variants by Belyeu, Jonathan R, Nicholas, Thomas J, Pedersen, Brent S, Sasani, Thomas A, Havrilla, James M, Kravitz, Stephanie N, Conway, Megan E, Lohman, Brian K, Quinlan, Aaron R, Layer, Ryan M

    Published 2018
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  7. 7
    De novo structural mutation rates and gamete-of-origin biases revealed through genome sequencing of 2,396 families

    De novo structural mutation rates and gamete-of-origin biases revealed through genome sequencing of 2,396 families by Belyeu, Jonathan R., Brand, Harrison, Wang, Harold, Zhao, Xuefang, Pedersen, Brent S., Feusier, Julie, Gupta, Meenal, Nicholas, Thomas J., Brown, Joseph, Baird, Lisa, Devlin, Bernie, Sanders, Stephan J., Jorde, Lynn B., Talkowski, Michael E., Quinlan, Aaron R.

    Published 2021
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  8. 8
    Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis

    Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis by Holstege, Henne, Pfeiffer, Wayne, Sie, Daoud, Hulsman, Marc, Nicholas, Thomas J., Lee, Clarence C., Ross, Tristen, Lin, Jue, Miller, Mark A., Ylstra, Bauke, Meijers-Heijboer, Hanne, Brugman, Martijn H., Staal, Frank J.T., Holstege, Gert, Reinders, Marcel J.T., Harkins, Timothy T., Levy, Samuel, Sistermans, Erik A.

    Published 2014
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  9. 9
    Comprehensive variant calling from whole‐genome sequencing identifies a complex inversion that disrupts ZFPM2 in familial congenital diaphragmatic hernia

    Comprehensive variant calling from whole‐genome sequencing identifies a complex inversion that disrupts ZFPM2 in familial congenital diaphragmatic hernia by Nicholas, Thomas J., Al‐Sweel, Najla, Farrell, Andrew, Mao, Rong, Bayrak‐Toydemir, Pinar, Miller, Christine E., Bentley, Dawn, Palmquist, Rachel, Moore, Barry, Hernandez, Edgar J., Cormier, Michael J., Fredrickson, Eric, Noble, Katherine, Rynearson, Shawn, Holt, Carson, Karren, Mary Anne, Bonkowsky, Joshua L., Tristani‐Firouzi, Martin, Yandell, Mark, Marth, Gabor, Quinlan, Aaron R., Brunelli, Luca, Toydemir, Reha M., Shayota, Brian J., Carey, John C., Boyden, Steven E., Malone Jenkins, Sabrina

    Published 2022
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  10. 10
    Exome sequencing of Finnish isolates enhances rare-variant association power

    Exome sequencing of Finnish isolates enhances rare-variant association power by Locke, Adam E, Steinberg, Karyn Meltz, Chiang, Charleston WK, Service, Susan K, Havulinna, Aki S, Stell, Laurel, Pirinen, Matti, Abel, Haley J, Chiang, Colby C, Fulton, Robert S, Jackson, Anne U, Kang, Chul Joo, Kanchi, Krishna L, Koboldt, Daniel C, Larson, David E, Nelson, Joanne, Nicholas, Thomas J, Pietilä, Arto, Ramensky, Vasily, Ray, Debashree, Scott, Laura J, Stringham, Heather M, Vangipurapu, Jagadish, Welch, Ryan, Yajnik, Pranav, Yin, Xianyong, Eriksson, Johan G, Ala-Korpela, Mika, Järvelin, Marjo-Riitta, Männikkö, Minna, Laivuori, Hannele, Dutcher, Susan K, Stitziel, Nathan O, Wilson, Richard K, Hall, Ira M, Sabatti, Chiara, Palotie, Aarno, Salomaa, Veikko, Laakso, Markku, Ripatti, Samuli, Boehnke, Michael, Freimer, Nelson B

    Published 2019
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