نتائج البحث - Mikhail Kolmogorov

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  1. 1
    Ragout—a reference-assisted assembly tool for bacterial genomes

    Ragout—a reference-assisted assembly tool for bacterial genomes حسب Mikhail Kolmogorov, Brian J. Raney, Benedict Paten, Son Pham

    منشور في 2014
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  2. 2
    Assembly of long, error-prone reads using repeat graphs

    Assembly of long, error-prone reads using repeat graphs حسب Mikhail Kolmogorov, Jeffrey Yuan, Yu Lin, Pavel A. Pevzner

    منشور في 2019
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  3. 3
    Assembly of Long Error-Prone Reads Using Repeat Graphs

    Assembly of Long Error-Prone Reads Using Repeat Graphs حسب Mikhail Kolmogorov, Jeffrey Yuan, Yu Lin, Pavel A. Pevzner

    منشور في 2018
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  4. 4
    Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads

    Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads حسب Anton Bankevich, Andrey V. Bzikadze, Mikhail Kolmogorov, Dmitry Antipov, Pavel A. Pevzner

    منشور في 2022
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  5. 5
    Assembly of long error-prone reads using de Bruijn graphs

    Assembly of long error-prone reads using de Bruijn graphs حسب Yu Lin, Jeffrey Yuan, Mikhail Kolmogorov, Max W. Shen, Mark Chaisson, Pavel A. Pevzner

    منشور في 2016
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  6. 6
    High-quality genome sequences of uncultured microbes by assembly of read clouds

    High-quality genome sequences of uncultured microbes by assembly of read clouds حسب Alex Bishara, Eli L. Moss, Mikhail Kolmogorov, Alma E. Parada, Ziming Weng, Arend Sidow, Anne Dekas, Serafim Batzoglou, Ami S. Bhatt

    منشور في 2018
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  7. 7
    Chromosome assembly of large and complex genomes using multiple references

    Chromosome assembly of large and complex genomes using multiple references حسب Mikhail Kolmogorov, Joel Armstrong, Brian J. Raney, Ian Streeter, Matthew Dunn, Fengtang Yang, Duncan T. Odom, Paul Flicek, Thomas Keane, David Thybert, Benedict Paten, Son Pham

    منشور في 2018
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  8. 8
    metaFlye: scalable long-read metagenome assembly using repeat graphs

    metaFlye: scalable long-read metagenome assembly using repeat graphs حسب Mikhail Kolmogorov, Derek M. Bickhart, Bahar Behsaz, Alexey Gurevich, Mikhail Rayko, Sung Bong Shin, Kristen L. Kuhn, Jeffrey Yuan, Evgeny Polevikov, Timothy P. L. Smith, Pavel A. Pevzner

    منشور في 2020
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  9. 9
    Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads

    Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads حسب Kishwar Shafin, Trevor Pesout, Pi-Chuan Chang, Maria Nattestad, Alexey Kolesnikov, Sidharth Goel, Gunjan Baid, Mikhail Kolmogorov, Jordan M. Eizenga, Karen H. Miga, P. Carnevali, Miten Jain, Andrew Carroll, Benedict Paten

    منشور في 2021
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  10. 10
    Genetic regulation of TERT splicing affects cancer risk by altering cellular longevity and replicative potential

    Genetic regulation of TERT splicing affects cancer risk by altering cellular longevity and replicative potential حسب Oscar Flórez-Vargas, Michelle Ho, Maxwell H. Hogshead, Brenen W. Papenberg, Chia‐Han Lee, Kaitlin Forsythe, Kristine Jones, Wen Luo, Kedest Teshome, Cornelis Blauwendraat, Kimberly J Billingsley, Mikhail Kolmogorov, Melissa Meredith, Benedict Paten, Raj Chari, Chi Zhang, John S. Schneekloth, Mitchell J. Machiela, Stephen J. Chanock, Shahinaz M. Gadalla, Sharon A. Savage, Sam M. Mbulaiteye, Ludmila Prokunina‐Olsson

    منشور في 2025
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  11. 11
    Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation

    Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation حسب Mikhail Kolmogorov, Kimberley J. Billingsley, Mira Mastoras, Melissa Meredith, Jean Monlong, Ryan Lorig-Roach, Mobin Asri, Pilar Álvarez Jerez, Laksh Malik, Ramita Dewan, Xylena Reed, Rylee M. Genner, Kensuke Daida, Sairam Behera, Kishwar Shafin, Trevor Pesout, Jeshuwin Prabakaran, P. Carnevali, Jianzhi Yang, Arang Rhie, Sonja W. Scholz, Bryan J. Traynor, Karen H. Miga, Miten Jain, Winston Timp, Adam M. Phillippy, Mark Chaisson, Fritz J. Sedlazeck, Cornelis Blauwendraat, Benedict Paten

    منشور في 2023
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  12. 12
    Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation

    Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation حسب Mikhail Kolmogorov, Kimberley J. Billingsley, Mira Mastoras, Melissa Meredith, Jean Monlong, Ryan Lorig-Roach, Mobin Asri, Pilar Álvarez Jerez, Laksh Malik, Ramita Dewan, Xylena Reed, Rylee M. Genner, Kensuke Daida, Sairam Behera, Kishwar Shafin, Trevor Pesout, Jeshuwin Prabakaran, P. Carnevali, Jianzhi Yang, Arang Rhie, Sonja W. Scholz, Bryan J. Traynor, Karen H. Miga, Miten Jain, Winston Timp, Adam M. Phillippy, Mark Chaisson, Fritz J. Sedlazeck, Cornelis Blauwendraat, Benedict Paten

    منشور في 2023
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  13. 13
    Severus: accurate detection and characterization of somatic structural variation in tumor genomes using long reads

    Severus: accurate detection and characterization of somatic structural variation in tumor genomes using long reads حسب Ayse Keskus, Asher Bryant, Tanveer Ahmad, Byunggil Yoo, Sergey Aganezov, Anton Goretsky, Ataberk Donmez, Lisa A. Lansdon, Isabel Rodriguez, Jimin Park, Yuelin Liu, Xiwen Cui, Joshua Gardner, Brandy McNulty, Samuel Sacco, Jyoti Shetty, Yongmei Zhao, Bao Tran, Giuseppe Narzisi, Adrienne Helland, Daniel E. Cook, Pi-Chuan Chang, Alexey Kolesnikov, Andrew Carroll, Erin K. Molloy, Irina Pushel, Erin Guest, Tomi Pastinen, Kishwar Shafin, Karen H. Miga, Salem Malikić, Chi-Ping Day, Nicolas Robine, S. Cenk Şahinalp, Michael Dean, Midhat S. Farooqi, Benedict Paten, Mikhail Kolmogorov

    منشور في 2024
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  14. 14
    Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation

    Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation حسب Jonas A. Gustafson, Sophia B Gibson, Nikhita Damaraju, Miranda Pg Zalusky, Kendra Hoekzema, David Twesigomwe, Lei Yang, Anthony A Snead, Phillip A. Richmond, Wouter De Coster, Nathan D. Olson, Andrea Guarracino, Qiuhui Li, Angela L Miller, Joy Goffena, Zachery Anderson, Sophie Storz, S. Ward, Maisha Sinha, Claudia Gonzaga‐Jauregui, Wayne E. Clarke, Anna O. Basile, André Corvelo, Catherine Reeves, Adrienne Helland, Rajeeva Musunuri, Mahler Revsine, Karynne Patterson, Cate Paschal, Christina Zakarian, Sara Goodwin, Tanner Jensen, E. Robb, W. Richard McCombie, Fritz J. Sedlazeck, Justin M. Zook, Stephen B. Montgomery, Erik Garrison, Mikhail Kolmogorov, Michael C. Schatz, Richard N. McLaughlin, Harriet Dashnow, Michael C. Zody, Matthew Loose, Miten Jain, Evan E. Eichler, Danny E. Miller

    منشور في 2024
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  15. 15
    Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci

    Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci حسب Jingtao Lilue, Anthony Doran, Ian T. Fiddes, Monica Abrudan, Joel Armstrong, Ruth Bennett, William Chow, Joanna Collins, Stephan C. Collins, Anne Czechanski, Petr Danecek, Mark Diekhans, Dirk-Dominik Dolle, Matt Dunn, Richard Durbin, Dent Earl, Anne C. Ferguson‐Smith, Paul Flicek, Jonathan Flint, Adam Frankish, Beiyuan Fu, Mark Gerstein, James Gilbert, Leo Goodstadt, Jennifer Harrow, Kerstin Howe, Ximena Ibarra-Soria, Mikhail Kolmogorov, Chris Lelliott, Darren W. Logan, Jane Loveland, Clayton E. Mathews, Richard Mott, Paul Muir, Stefanie Nachtweide, Fábio C. P. Navarro, Duncan T. Odom, Naomi Park, Sarah Pelan, Son Pham, Mike Quail, Laura G. Reinholdt, Lars Romoth, Lesley Shirley, Cristina Sisu, Marcela Sjöberg, Mario Stanke, Charles A. Steward, Mark Thomas, Glen Threadgold, David Thybert, James Torrance, Kim Wong, Jonathan Wood, Binnaz Yalcin, Fengtang Yang, David J. Adams, Benedict Paten, Thomas Keane

    منشور في 2018
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  16. 16
    Semi-automated assembly of high-quality diploid human reference genomes

    Semi-automated assembly of high-quality diploid human reference genomes حسب Erich D. Jarvis, Giulio Formenti, Arang Rhie, Andrea Guarracino, Chentao Yang, Jonathan Wood, Alan Tracey, Françoise Thibaud‐Nissen, Mitchell R. Vollger, David Porubský, Haoyu Cheng, Mobin Asri, Glennis A. Logsdon, P. Carnevali, Mark Chaisson, Chen-Shan Chin, Sarah Cody, Joanna Collins, Peter Ebert, Merly Escalona, Olivier Fédrigo, Robert S. Fulton, Lucinda Fulton, Shilpa Garg, Jennifer L. Gerton, Jay Ghurye, Anastasiya Granat, Richard E. Green, William T. Harvey, Patrick Hasenfeld, Alex Hastie, Marina Haukness, Erich Jaeger, Miten Jain, Melanie Kirsche, Mikhail Kolmogorov, Jan O. Korbel, Sergey Koren, Jonas Korlach, Joyce Lee, Daofeng Li, Tina Lindsay, Julian Lucas, Feng Luo, Tobias Marschall, Matthew W. Mitchell, Jennifer McDaniel, Fan Nie, Hugh E. Olsen, Nathan D. Olson, Trevor Pesout, Tamara Potapova, Daniela Puiu, Allison Regier, Jue Ruan, Steven L. Salzberg, Ashley D. Sanders, Michael C. Schatz, Anthony D. Schmitt, Valérie Schneider, Siddarth Selvaraj, Kishwar Shafin, Alaina Shumate, Nathan O. Stitziel, Catherine Brasseur, James Torrance, Justin Wagner, Jianxin Wang, Aaron M. Wenger, Chuan‐Le Xiao, Aleksey V. Zimin, Guojie Zhang, Ting Wang, Heng Li, Erik Garrison, David Haussler, Ira M. Hall, Justin M. Zook, Evan E. Eichler, Adam M. Phillippy, Benedict Paten, Kerstin Howe, Karen H. Miga

    منشور في 2022
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  17. 17
    Critical Assessment of Metagenome Interpretation: the second round of challenges

    Critical Assessment of Metagenome Interpretation: the second round of challenges حسب Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, David Koslicki, Till Robin Lesker, Alexey Gurevich, Gary Robertson, Mohammed Alser, Dmitry Antipov, Francesco Beghini, Denis Bertrand, Jaqueline Brito, C. Titus Brown, Jan P. Buchmann, Aydın Buluç, Bo Chen, Rayan Chikhi, Philip T. L. C. Clausen, Alexandru Cristian, Piotr Wojciech Dąbrowski, Aaron E. Darling, Rob Egan, Eleazar Eskin, Evangelos Georganas, Eugene Goltsman, Melissa A. Gray, Lars Hestbjerg Hansen, Steven Hofmeyr, Pingqin Huang, Luiz Irber, Huijue Jia, Tue Sparholt Jørgensen, Silas Kieser, Terje Klemetsen, Axel Kola, Mikhail Kolmogorov, Anton Korobeynikov, Jason C. Kwan, Nathan LaPierre, Claire Lemaitre, Chenhao Li, Antoine Limasset, Fábio Malcher Miranda, Serghei Mangul, Vanessa R. Marcelino, Camille Marchet, Pierre Marijon, Dmitry Meleshko, Daniel R. Mende, Alessio Milanese, Niranjan Nagarajan, Jakob Nybo Nissen, Sergey Nurk, Leonid Oliker, Lucas Paoli, Pierre Peterlongo, Vitor C. Piro, Jacob S. Porter, Simon Rasmussen, Evan Rees, Knut Reinert, Bernhard Y. Renard, Espen Mikal Robertsen, Gail Rosen, Hans‐Joachim Ruscheweyh, Varuni Sarwal, Nicola Segata, Enrico Seiler, Lizhen Shi, Fengzhu Sun, Shinichi Sunagawa, Søren J. Sørensen, Ashleigh Thomas, Chengxuan Tong, Mirko Trajkovski, Julien Tremblay, Gherman Uritskiy, Riccardo Vicedomini, Zhengyang Wang, Ziye Wang, Zhong Wang, Andrew Warren, Nils Peder Willassen, Katherine Yelick, Ronghui You, Georg Zeller, Zhengqiao Zhao, Shanfeng Zhu, Jie Zhu, Rubén Garrido‐Oter, Petra Gastmeier, Stéphane Hacquard, Susanne Häußler, Ariane Khaledi, Friederike Maechler, Fantin Mesny, Simona Radutoiu, Paul Schulze‐Lefert, Nathiana Smit, Till Strowig

    منشور في 2022
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