Rezultati - Michalis Hadjithomas

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  1. 1
    Selecting One of Several Mating Types through Gene Segment Joining and Deletion in Tetrahymena thermophila

    Selecting One of Several Mating Types through Gene Segment Joining and Deletion in Tetrahymena thermophila od Marcella D. Cervantes, Eileen P. Hamilton, Jie Xiong, Michael J. Lawson, Dongxia Yuan, Michalis Hadjithomas, Wei Miao, Eduardo Orias

    Izdano 2013
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  2. 2
    Expansion of RiPP biosynthetic space through integration of pan-genomics and machine learning uncovers a novel class of lanthipeptides

    Expansion of RiPP biosynthetic space through integration of pan-genomics and machine learning uncovers a novel class of lanthipeptides od Alexander Kloosterman, Peter Cimermančič, Somayah S. Elsayed, Chao Du, Michalis Hadjithomas, Mohamed S. Donia, Michael A. Fischbach, Gilles P. van Wezel, Marnix H. Medema

    Izdano 2020
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  3. 3
    IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes

    IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes od Michalis Hadjithomas, I-Min A. Chen, Ken Chu, Jinghua Huang, Anna Ratner, Krishna Palaniappan, Evan Andersen, Victor Markowitz, Nikos C. Kyrpides, Natalia Ivanova

    Izdano 2016
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  4. 4
    Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system

    Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system od I-Min A. Chen, Victor Markowitz, Krishna Palaniappan, Ernest Szeto, Ken Chu, Jinghua Huang, Anna Ratner, Manoj Pillay, Michalis Hadjithomas, Marcel Huntemann, Natalia Mikhailova, Galina Ovchinnikova, Natalia Ivanova, Nikos C. Kyrpides

    Izdano 2016
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  5. 5
    IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites

    IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites od Michalis Hadjithomas, I-Min Amy Chen, Ken Chu, Anna Ratner, Krishna Palaniappan, Ernest Szeto, Jinghua Huang, T. B. K. Reddy, Peter Cimermančič, Michael A. Fischbach, Natalia Ivanova, Victor Markowitz, Nikos C. Kyrpides, Amrita Pati

    Izdano 2015
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  6. 6
    Hidden genomic evolution in a morphospecies—The landscape of rapidly evolving genes in Tetrahymena

    Hidden genomic evolution in a morphospecies—The landscape of rapidly evolving genes in Tetrahymena od Jie Xiong, Wentao Yang, Kai Chen, Chuanqi Jiang, Yang Ma, Xiaocui Chai, Guanxiong Yan, Guangying Wang, Dongxia Yuan, Yifan Liu, Shelby Bidwell, Nikhat Zafar, Michalis Hadjithomas, Vivek Krishnakumar, Robert S. Coyne, Eduardo Orias, Wei Miao

    Izdano 2019
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  7. 7
    1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

    1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life od Supratim Mukherjee, R. Seshadri, Neha Varghese, Emiley A. Eloe‐Fadrosh, Jan P. Meier‐Kolthoff, Markus Göker, Roger Coates, Michalis Hadjithomas, Georgios A. Pavlopoulos, David Páez-Espino, Yasuo Yoshikuni, Axel Visel, William B. Whitman, George M Garrity, Jonathan A. Eisen, Philip Hugenholtz, Amrita Pati, Natalia Ivanova, Tanja Woyke, Hans‐Peter Klenk, Nikos C. Kyrpides

    Izdano 2017
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  8. 8
    Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome

    Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome od Eileen P. Hamilton, Aurélie Kapusta, Piroska Hüvös, Shelby Bidwell, Nikhat Zafar, Haibao Tang, Michalis Hadjithomas, Vivek Krishnakumar, Jonathan H. Badger, Elisabet Caler, Carsten Russ, Qiandong Zeng, Fan Lin, Joshua Z. Levin, Terrance Shea, Sarah Young, Ryan Hegarty, Riza M. Daza, Sharvari Gujja, Jennifer R. Wortman, Bruce W. Birren, Chad Nusbaum, Jainy Thomas, Clayton M. Carey, Ellen J. Pritham, Cédric Feschotte, Tomoko Noto, Kazufumi Mochizuki, Romeo Papazyan, Sean D. Taverna, Paul H. Dear, Donna Cassidy-Hanley, Jie Xiong, Wei Miao, Eduardo Orias, Robert S. Coyne

    Izdano 2016
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  9. 9
    Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes

    Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes od Hernán Lorenzi, Asis Khan, Michael S. Behnke, Sivaranjani Namasivayam, Lakshmipuram S. Swapna, Michalis Hadjithomas, Svetlana Karamycheva, Deborah F. Pinney, Brian P. Brunk, James W. Ajioka, Daniel Ajzenberg, John C. Boothroyd, Jon P. Boyle, Marie‐Laure Dardé, Maria Alejandra Diaz‐Miranda, J. P. Dubey, Heather Fritz, Solange María Gennari, Brian D. Gregory, Kami Kim, Jeroen P. J. Saeij, Chunlei Su, Michael W. White, Xing‐Quan Zhu, Daniel K. Howe, Benjamin M. Rosenthal, Michael E. Grigg, John Parkinson, Liang Liu, Jessica C. Kissinger, David S. Roos, L. David Sibley

    Izdano 2016
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  10. 10
    Variability and Bias in Microbiome Metagenomic Sequencing: an Interlaboratory Study Comparing Experimental Protocols

    Variability and Bias in Microbiome Metagenomic Sequencing: an Interlaboratory Study Comparing Experimental Protocols od Samuel P. Forry, Stephanie L. Servetas, Jason G. Kralj, Keng Lin Soh, Michalis Hadjithomas, Raúl J. Cano, Martha Carlin, María Galli de Amorim, Benjamin Auch, Matthew G. Bakker, Thais Fernanda Bartelli, Juan P. Bustamante, Ignacio Cassol, Mauricio Chalita, Emmanuel Dias‐Neto, Aaron Del Duca, Daryl M. Gohl, Jekaterina Kazantseva, Muyideen Haruna, Peter Menzel, Bruno S. Moda, Lorieza Neuberger-Castillo, Diana Noronha Nunes, Isha R. Patel, Rodrigo D. Peralta, Adrien Saliou, Rolf Schwarzer, Samantha Sevilla, Isabella K. T. M. Takenaka, Jeremy Wang, Rob Knight, Dirk Gevers, Scott A. Jackson

    Izdano 2023
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  11. 11
    Variability and bias in microbiome metagenomic sequencing: an interlaboratory study comparing experimental protocols

    Variability and bias in microbiome metagenomic sequencing: an interlaboratory study comparing experimental protocols od Samuel P. Forry, Stephanie L. Servetas, Jason G. Kralj, Keng Lin Soh, Michalis Hadjithomas, Raúl J. Cano, Martha Carlin, María Galli de Amorim, Benjamin Auch, Matthew G. Bakker, Thais Fernanda Bartelli, Juan P. Bustamante, Ignacio Cassol, Mauricio Chalita, Emmanuel Dias‐Neto, Aaron Del Duca, Daryl M. Gohl, Jekaterina Kazantseva, Muyideen Haruna, Peter Menzel, Bruno S. Moda, Lorieza Neuberger-Castillo, Diana Noronha Nunes, Isha R. Patel, Rodrigo D. Peralta, Adrien Saliou, Rolf Schwarzer, Samantha Sevilla, Isabella K. T. M. Takenaka, Jeremy Wang, Rob Knight, Dirk Gevers, Scott A. Jackson

    Izdano 2024
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  12. 12
    Total Synthesis of a Functional Designer Eukaryotic Chromosome

    Total Synthesis of a Functional Designer Eukaryotic Chromosome od Narayana Annaluru, Héloïse Muller, Leslie A. Mitchell, Sivaprakash Ramalingam, Giovanni Stracquadanio, Sarah M. Richardson, Jessica S. Dymond, Zheng Kuang, Lisa Z. Scheifele, Eric M. Cooper, Yizhi Cai, Karen Zeller, Neta Agmon, Jeffrey S. Han, Michalis Hadjithomas, Jennifer Tullman, Katrina Caravelli, Kimberly M. Cirelli, Zheyuan Guo, Viktoriya London, Apurva Yeluru, Sindurathy Murugan, Karthikeyan Kandavelou, Nicolas Agier, Gilles Fischer, Kun Yang, James A. Martin, Murat Bilgel, Pavlo Bohutskyi, Kristin M. Boulier, Brian J. Capaldo, Joy W. Chang, Kristie Charoen, Woo Jin Choi, Peter Deng, James E. DiCarlo, J. Y. H. Doong, Jessilyn Dunn, Jason I. Feinberg, Christopher Fernandez, Charlotte E. Floria, David Gladowski, Pasha Hadidi, Isabel E. Ishizuka, Javaneh Jabbari, Calvin Y. L. Lau, Pablo A. Lee, Sean Li, Denise Lin, Matthias E. Linder, Jonathan P. Ling, Jaime Liu, Jonathan Liu, Mariya London, Henry Ma, Jessica Mao, Jessica E. McDade, Alexandra McMillan, Aaron M. Moore, Won Chan Oh, Yu Ouyang, Ruchi Patel, Marina Paul, Laura C. Paulsen, Judy Qiu, Alex Rhee, Matthew G. Rubashkin, Ina Y. Soh, Nathaniel E. Sotuyo, Venkatesh Srinivas, Allison Suarez, Andy O.-T. Wong, Remus Wong, Wei Xie, Yijie Xu, Allen T. Yu, Romain Koszul, Joel S. Bader, Jef D. Boeke, Srinivasan Chandrasegaran

    Izdano 2014
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  13. 13
    Minimum Information about a Biosynthetic Gene cluster

    Minimum Information about a Biosynthetic Gene cluster od Marnix H. Medema, Renzo Kottmann, Pelin Yilmaz, Matthew Cummings, John Biggins, Kai Blin, Irene de Bruijn, Yit‐Heng Chooi, Jan Claesen, Roger Coates, Pablo Cruz‐Morales, Srikanth Duddela, Stephanie Düsterhus, Daniel Edwards, David P. Fewer, Neha Garg, Christoph Geiger, Juan Pablo Gomez‐Escribano, Anja Greule, Michalis Hadjithomas, Anthony S. Haines, Eric J. N. Helfrich, Matthew L. Hillwig, Keishi Ishida, Adam C. Jones, Carla S. Jones, Katrin Jungmann, Carsten Kegler, Hyun Uk Kim, Peter Kötter, Daniel Krug, Joleen Masschelein, Alexey V. Melnik, Simone M. Mantovani, Emily A. Monroe, Marcus A. Moore, Nathan A. Moss, Hans‐Wilhelm Nützmann, Guohui Pan, Amrita Pati, Daniel Petras, F. Jerry Reen, Federico Rosconi, Zhe Rui, Zhenhua Tian, Nicholas J. Tobias, Yuta Tsunematsu, Philipp Wiemann, Elizabeth E. Wyckoff, Xiaohui Yan, Grace Yim, Fengan Yu, Yunchang Xie, Bertrand Aigle, Alexander K. Apel, Carl J. Balibar, Emily P. Balskus, Francisco Barona‐Gómez, Andreas Bechthold, Helge B. Bode, Rainer Borriss, Sean F. Brady, Axel A. Brakhage, Patrick Caffrey, Yi‐Qiang Cheng, Jon Clardy, Russell J. Cox, René De Mot, Stefano Donadio, Mohamed S. Donia, Wilfred A. van der Donk, Pieter C. Dorrestein, Seán Doyle, Arnold J. M. Driessen, Monika Ehling‐Schulz, Karl-Dieter Entian, Michael A. Fischbach, Lena Gerwick, William H. Gerwick, Harald Gross, Bertolt Gust, Christian Hertweck, Monica Höfte, Susan E. Jensen, Jianhua Ju, Leonard Katz, Leonard Kaysser, Jonathan L. Klassen, Nancy P. Keller, Ján Kormanec, Oscar P. Kuipers, Tomohisa Kuzuyama, Nikos C. Kyrpides, Hyung-Jin Kwon, Sylvie Lautru, Rob Lavigne, Chia Y. Lee, Linquan Bai, Xinyu Liu, Wen Liu

    Izdano 2015
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