Výsledky vyhledávání - Michael F. Lin

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  1. 1
    PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

    PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions Autor Michael F. Lin, Irwin Jungreis, Manolis Kellis

    Vydáno 2011
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  2. 2
    Evolutionary Dynamics of Abundant Stop Codon Readthrough

    Evolutionary Dynamics of Abundant Stop Codon Readthrough Autor Irwin Jungreis, Clara S. Chan, Robert M. Waterhouse, Gabriel Fields, Michael F. Lin, Manolis Kellis

    Vydáno 2016
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  3. 3
    FRESCo: finding regions of excess synonymous constraint in diverse viruses

    FRESCo: finding regions of excess synonymous constraint in diverse viruses Autor Rachel Sealfon, Michael F. Lin, Irwin Jungreis, Maxim Y. Wolf, Manolis Kellis, Pardis C. Sabeti

    Vydáno 2015
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  4. 4
    Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes

    Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes Autor Michael F. Lin, Pouya Kheradpour, Stefan Washietl, Brian J. Parker, Jakob Skou Pedersen, Manolis Kellis

    Vydáno 2011
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  5. 5
    GLnexus: joint variant calling for large cohort sequencing

    GLnexus: joint variant calling for large cohort sequencing Autor Michael F. Lin, Ohad Rodeh, John S. Penn, Xiaodong Bai, Jeffrey G. Reid, Olga Krasheninina, William Salerno

    Vydáno 2018
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  6. 6
    Evidence of abundant stop codon readthrough in <i>Drosophila</i> and other metazoa

    Evidence of abundant stop codon readthrough in <i>Drosophila</i> and other metazoa Autor Irwin Jungreis, Michael F. Lin, Rebecca Spokony, Clara S. Chan, Nicolas Nègre, Alec Victorsen, Kevin P. White, Manolis Kellis

    Vydáno 2011
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  7. 7
    Distinguishing protein-coding and noncoding genes in the human genome

    Distinguishing protein-coding and noncoding genes in the human genome Autor Michèle Clamp, Ben Fry, Mike Kamal, Xiaohui Xie, James Cuff, Michael F. Lin, Manolis Kellis, Kerstin Lindblad‐Toh, Eric S. Lander

    Vydáno 2007
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  8. 8
    Intracellular heterogeneity in mitochondrial membrane potentials revealed by a J-aggregate-forming lipophilic cation JC-1.

    Intracellular heterogeneity in mitochondrial membrane potentials revealed by a J-aggregate-forming lipophilic cation JC-1. Autor S T Smiley, Martin Reers, C Mottola-Hartshorn, Michael F. Lin, Aileen B. Chen, Thomas W. Smith, G Steele, L B Chen

    Vydáno 1991
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  9. 9
    Variation graph toolkit improves read mapping by representing genetic variation in the reference

    Variation graph toolkit improves read mapping by representing genetic variation in the reference Autor Erik Garrison, Jouni Sirén, Adam M. Novak, Glenn Hickey, Jordan M. Eizenga, Eric T. Dawson, William E. Jones, Shilpa Garg, Charles Markello, Michael F. Lin, Benedict Paten, Richard Durbin

    Vydáno 2018
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  10. 10
    Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

    Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals Autor Mitchell Guttman, Ido Amit, Manuel Garber, Courtney E. French, Michael F. Lin, David M. Feldser, Maite Huarte, Or Zuk, Bryce W. Carey, John P. Cassady, Moran N. Cabili, Rudolf Jaenisch, Tarjei S. Mikkelsen, Tyler Jacks, Nir Hacohen, B Bernstein, Manolis Kellis, Aviv Regev, John L. Rinn, Eric S. Lander

    Vydáno 2009
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  11. 11
    Revisiting the protein-coding gene catalog of<i>Drosophila melanogaster</i>using 12 fly genomes

    Revisiting the protein-coding gene catalog of<i>Drosophila melanogaster</i>using 12 fly genomes Autor Michael F. Lin, Joseph W. Carlson, Madeline A. Crosby, Beverley B Matthews, Charles Yu, Soo Hyung Park, Kenneth H. Wan, Andrew J. Schroeder, L. Sian Gramates, Susan E. St. Pierre, Margaret Roark, Kenneth L. Wiley, Rob J. Kulathinal, Peili Zhang, Kyl V. Myrick, Jerry Antone, S Celniker, William M Gelbart, Manolis Kellis

    Vydáno 2007
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  12. 12
    Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters

    Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters Autor Tiffany Hung, Yulei Wang, Michael F. Lin, Ashley K. Koegel, Yojiro Kotake, Gavin D. Grant, Hugo M. Horlings, Nilay Shah, Christopher B. Umbricht, Pei Wang, Yu Wang, Benjamin Kong, Anita Langerød, Anne‐Lise Børresen‐Dale, Seung K. Kim, Marc J. van de Vijver, Saraswati Sukumar, Michael L. Whitfield, Manolis Kellis, Yue Xiong, David J. Wong, Howard Y. Chang

    Vydáno 2011
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  13. 13
    Circulating tumour cells as a biomarker for diagnosis and staging in pancreatic cancer

    Circulating tumour cells as a biomarker for diagnosis and staging in pancreatic cancer Autor Jacob S. Ankeny, Colin M. Court, Shuang Hou, Q Li, Min Song, Dejun Wu, Jie‐Fu Chen, Tien‐Jung Lee, Michael F. Lin, S Sho, Matthew M. Rochefort, Mark D. Girgis, Jingwen Yao, Zev A. Wainberg, V. Raman Muthusamy, Rabindra R. Watson, Timothy R. Donahue, O. Joe Hines, Howard A. Reber, Thomas G. Graeber, Hsian‐Rong Tseng, James S. Tomlinson

    Vydáno 2016
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  14. 14
    Genome Graphs

    Genome Graphs Autor Adam M. Novak, Glenn Hickey, Erik Garrison, Sean Blum, Abram Connelly, Alexander Dilthey, Jordan M. Eizenga, M. A. Saleh Elmohamed, Sally K. Guthrie, André Kahles, Stephen Keenan, Jerome Kelleher, Deniz Kural, Heng Li, Michael F. Lin, Karen H. Miga, Nancy Ouyang, Goran Rakočević, Maciek Smuga-Otto, Alexander Wait Zaranek, Richard Durbin, Gil McVean, David Haussler, Benedict Paten

    Vydáno 2017
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  15. 15
    IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring

    IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring Autor Katrina Kalantar, Tiago Rodrigues De Carvalho, Charles F. A. de Bourcy, Boris Dimitrov, Greg Dingle, Rebecca Egger, Julie Han, Olivia Holmes, Yun-Fang Juan, Ryan J. King, Andrey Kislyuk, Michael F. Lin, Maria Mariano, Todd Morse, Lucia Reynoso, David Rissato Cruz, Jonathan Sheu, Jennifer Tang, James Z. Wang, Mark A. Zhang, Emily Zhong, Vida Ahyong, Sreyngim Lay, Sophana Chea, Jennifer A. Bohl, Jessica E. Manning, Cristina M. Tato, Joseph L. DeRisi

    Vydáno 2020
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  16. 16
    Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities

    Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities Autor Michael E. Talkowski, Gilles Maussion, Liam Crapper, Jill A. Rosenfeld, Ian Blumenthal, Carrie Hanscom, Colby Chiang, Amelia M. Lindgren, Shahrin Pereira, Douglas M. Ruderfer, Alpha Diallo, Juan Pablo López, Gustavo Turecki, Elizabeth Chen, Carolina Oliveira Gigek, David J. Harris, Va Lip, Yu An, Marta Biagioli, Marcy E. MacDonald, Michael F. Lin, Stephen J. Haggarty, Pamela Sklar, Shaun Purcell, Manolis Kellis, Stuart Schwartz, Lisa G. Shaffer, Marvin R. Natowicz, Yiping Shen, Cynthia C. Morton, James F. Gusella, Carl Ernst

    Vydáno 2012
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  17. 17
    The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

    The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes Autor Kim D. Pruitt, Jennifer Harrow, Rachel Harte, Craig Wallin, Mark Diekhans, Donna Maglott, Steve Searle, Catherine M. Farrell, Jane Loveland, Barbara J. Ruef, Elizabeth A. Hart, Marie‐Marthe Suner, Melissa Landrum, Bronwen Aken, Sarah Ayling, Robert Baertsch, Julio Fernandez-Banet, Joshua L. Cherry, Val Curwen, Michael DiCuccio, Manolis Kellis, Jennifer Lee, Michael F. Lin, Michael Schuster, Andrew Shkeda, Clara Amid, Garth Brown, Oksana I. Dukhanina, Adam Frankish, Jennifer Hart, B. Maidak, Jonathan M. Mudge, Michael R. Murphy, Terence D. Murphy, Jeena Rajan, Bhanu Rajput, Lillian D. Riddick, Catherine Snow, Charles A. Steward, David Webb, Janet A. Weber, Laurens Wilming, Wenyu Wu, Ewan Birney, David Haussler, Tim Hubbard, James Ostell, Richard Durbin, David J. Lipman

    Vydáno 2009
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  18. 18
    A high-resolution map of human evolutionary constraint using 29 mammals

    A high-resolution map of human evolutionary constraint using 29 mammals Autor Kerstin Lindblad‐Toh, Manuel Garber, Or Zuk, Michael F. Lin, Brian J. Parker, Stefan Washietl, Pouya Kheradpour, Jason Ernst, Gregory E. Jordan, Evan Mauceli, Lucas D. Ward, Craig B. Lowe, Alisha K. Holloway, Michèle Clamp, Sante Gnerre, Jessica Alföldi, Kathryn Beal, Jean L. Chang, Hiram Clawson, James Cuff, Federica Di Palma, Stephen Fitzgerald, Paul Flicek, Mitchell Guttman, Melissa J. Hubisz, David B. Jaffe, Irwin Jungreis, W. James Kent, Dennis Kostka, Marcia Lara, André L. Martins, Tim Massingham, Ida Moltke, Brian J. Raney, Matthew D. Rasmussen, Jim Robinson, Alexander Stark, Albert J. Vilella, Jiayu Wen, Xiaohui Xie, Michael C. Zody, Kim C. Worley, Christie Kovar, Donna M. Muzny, Richard A. Gibbs, Wesley C. Warren, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Ewan Birney, Elliott H. Margulies, Javier Herrero, Eric D. Green, David Haussler, Adam Siepel, Nick Goldman, Katherine S. Pollard, Jakob Skou Pedersen, Eric S. Lander, Manolis Kellis

    Vydáno 2011
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  19. 19
    Comparative Functional Genomics of the Fission Yeasts

    Comparative Functional Genomics of the Fission Yeasts Autor Nick Rhind, Zehua Chen, Moran Yassour, Dawn Thompson, Brian J. Haas, Naomi Habib, Ilan Wapinski, Sushmita Roy, Michael F. Lin, David I. Heiman, Sarah Young, Kanji Furuya, Yabin Guo, Alison L. Pidoux, Huei Mei Chen, Barbara Robbertse, Jonathan M. Goldberg, Keita Aoki, Elizabeth H. Bayne, Aaron M. Berlin, Christopher A. Desjardins, Edward Dobbs, Livio Dukaj, Fan Lin, Michael G. FitzGerald, Courtney E. French, Sharvari Gujja, Klavs R. Hansen, Daniel Keifenheim, Joshua Z. Levin, Rebecca A. Mosher, Carolin A. Müller, Jenna Pfiffner, Margaret Priest, Carsten Russ, Agata Smialowska, Peter Swoboda, Sean M. Sykes, Matthew Vaughn, Sonya Vengrova, Ryan J. Yoder, Qiandong Zeng, Robin C. Allshire, David C. Baulcombe, Bruce W. Birren, William R. Brown, Karl Ekwall, Manolis Kellis, Janet Leatherwood, Henry L. Levin, Hanah Margalit, Rob Martienssen, Conrad A. Nieduszynski, Joseph W. Spatafora, Nir Friedman, Jacob Z. Dalgaard, Peter Baumann, Hironori Niki, Aviv Regev, Chad Nusbaum

    Vydáno 2011
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  20. 20
    Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

    Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures Autor Alexander Stark, Michael F. Lin, Pouya Kheradpour, Jakob Skou Pedersen, Leopold Parts, Joseph W. Carlson, Madeline A. Crosby, Matthew D. Rasmussen, Sushmita Roy, Ameya N. Deoras, J. Graham Ruby, Julius Brennecke, Madeline A. Crosby, Beverley B Matthews, Andrew J. Schroeder, L. Sian Gramates, Susan E. St. Pierre, Margaret Roark, Kenneth L. Wiley, Rob J. Kulathinal, Peili Zhang, Kyl V. Myrick, Jerry V. Antone, William M Gelbart, Joseph W. Carlson, Charles Yu, Soo Park, Kenneth H. Wan, Susan E. Celniker, Emily Hodges, Angie S. Hinrichs, Anat Caspi, Benedict Paten, Seung-Won Park, Mira V. Han, Morgan L. Maeder, Benjamin J. Polansky, Bryanne E. Robson, Stein Aerts, Jacques van Helden, Bassem A. Hassan, Donald G. Gilbert, Deborah Eastman, Michael Rice, Michael P. Weir, Matthew W. Hahn, Yongkyu Park, Colin N. Dewey, Lior Pachter, W. James Kent, David Haussler, Eric C. Lai, David P. Bartel, Gregory J. Hannon, Thomas C. Kaufman, Michael B. Eisen, Andrew G. Clark, Douglas Smith, Susan E. Celniker, William M Gelbart, Manolis Kellis

    Vydáno 2007
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