Search Results - Michael C. Zody

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  1. 1
    V-Phaser 2: variant inference for viral populations

    V-Phaser 2: variant inference for viral populations by Xiao Yang, Patrick Charlebois, Alex Macalalad, Matthew R. Henn, Michael C. Zody

    Published 2013
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  2. 2
    Strong and Weak Male Mutation Bias at Different Sites in the Primate Genomes: Insights from the Human-Chimpanzee Comparison

    Strong and Weak Male Mutation Bias at Different Sites in the Primate Genomes: Insights from the Human-Chimpanzee Comparison by James Taylor, Svitlana Tyekucheva, Michael C. Zody, Francesca Chiaromonte, Kateryna D. Makova

    Published 2005
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  3. 3
    Structural haplotypes and recent evolution of the human 17q21.31 region

    Structural haplotypes and recent evolution of the human 17q21.31 region by Linda M Boettger, Robert E. Handsaker, Michael C. Zody, Steven A. McCarroll

    Published 2012
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  4. 4
    Identifying novel constrained elements by exploiting biased substitution patterns

    Identifying novel constrained elements by exploiting biased substitution patterns by Manuel Garber, Mitchell Guttman, Michèle Clamp, Michael C. Zody, Nir Friedman, Xiaohui Xie

    Published 2009
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  5. 5
    Conpair: concordance and contamination estimator for matched tumor–normal pairs

    Conpair: concordance and contamination estimator for matched tumor–normal pairs by Ewa A. Bergmann, Bo‐Juen Chen, Kanika Arora, Vladimir Vacic, Michael C. Zody

    Published 2016
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  6. 6
    Why do human diversity levels vary at a megabase scale?

    Why do human diversity levels vary at a megabase scale? by Ines Hellmann, Kay Prüfer, Hongkai Ji, Michael C. Zody, Svante Pääbo, Susan E. Ptak

    Published 2005
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  7. 7
    ATHLATES: accurate typing of human leukocyte antigen through exome sequencing

    ATHLATES: accurate typing of human leukocyte antigen through exome sequencing by Chang Liu, Xiao Yang, Brian Duffy, Thalachallour Mohanakumar, Robi D. Mitra, Michael C. Zody, John D. Pfeifer

    Published 2013
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  8. 8
    Whole-Genome Sequence Assembly for Mammalian Genomes: Arachne 2

    Whole-Genome Sequence Assembly for Mammalian Genomes: Arachne 2 by David B. Jaffe, Jonathan A. Butler, Sante Gnerre, Evan Mauceli, Kerstin Lindblad‐Toh, Jill P. Mesirov, Michael C. Zody, Eric S. Lander

    Published 2003
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  9. 9
    The mosaic structure of variation in the laboratory mouse genome

    The mosaic structure of variation in the laboratory mouse genome by Claire M. Wade, Edward J. Kulbokas, Andrew Kirby, Michael C. Zody, James C. Mullikin, Eric S. Lander, Kerstin Lindblad‐Toh, Mark J. Daly

    Published 2002
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  10. 10
    Whole-genome bisulfite sequencing with improved accuracy and cost

    Whole-genome bisulfite sequencing with improved accuracy and cost by Masako Suzuki, Will Liao, Frank Wos, Andrew D. Johnston, Justin DeGrazia, Jennifer Ishii, Toby Bloom, Michael C. Zody, Søren Germer, John M. Greally

    Published 2018
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  11. 11
    Genome-wide somatic variant calling using localized colored de Bruijn graphs

    Genome-wide somatic variant calling using localized colored de Bruijn graphs by Giuseppe Narzisi, André Corvelo, Kanika Arora, Ewa A. Bergmann, Minita Shah, Rajeeva Musunuri, Anne‐Katrin Emde, Nicolas Robine, Vladimir Vacic, Michael C. Zody

    Published 2018
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  12. 12
    De novo assembly of highly diverse viral populations

    De novo assembly of highly diverse viral populations by Xiao Yang, Patrick Charlebois, Sante Gnerre, Matthew Coole, Niall J. Lennon, Joshua Z. Levin, James Qu, Elizabeth M. Ryan, Michael C. Zody, Matthew R. Henn

    Published 2012
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  13. 13
    Novel origins of copy number variation in the dog genome

    Novel origins of copy number variation in the dog genome by Jonas Berglund, Elisa Nevalainen, Anna-Maja Molin, Michele Perloski, Catherine André, Michael C. Zody, Ted Sharpe, Christophe Hitte, Kerstin Lindblad‐Toh, Hannes Lohi, Matthew T. Webster

    Published 2012
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  14. 14
    Within-Host Whole-Genome Deep Sequencing and Diversity Analysis of Human Respiratory Syncytial Virus Infection Reveals Dynamics of Genomic Diversity in the Absence and Presence of Immune Pressure

    Within-Host Whole-Genome Deep Sequencing and Diversity Analysis of Human Respiratory Syncytial Virus Infection Reveals Dynamics of Genomic Diversity in the Absence and Presence of... by Yonatan H. Grad, Ruchi M. Newman, Michael C. Zody, Xiao Yang, Ryan C. Murphy, James Qu, Christine M. Malboeuf, Joshua Z. Levin, Marc Lipsitch, John P. DeVincenzo

    Published 2014
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  15. 15
    Deep whole-genome sequencing of 3 cancer cell lines on 2 sequencing platforms

    Deep whole-genome sequencing of 3 cancer cell lines on 2 sequencing platforms by Kanika Arora, Minita Shah, Molly Johnson, Rashesh Sanghvi, Jennifer M. G. Shelton, Kshithija Nagulapalli, Dayna M. Oschwald, Michael C. Zody, Søren Germer, Vaidehi Jobanputra, Jade Carter, Nicolas Robine

    Published 2019
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  16. 16
    Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes

    Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes by Jana Ebler, Peter Ebert, Wayne E. Clarke, Tobias Rausch, Peter A. Audano, Torsten Houwaart, Yafei Mao, Jan O. Korbel, Evan E. Eichler, Michael C. Zody, Alexander Dilthey, Tobias Marschall

    Published 2022
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  17. 17
    Dynamics of Dengue Disease Severity Determined by the Interplay Between Viral Genetics and Serotype-Specific Immunity

    Dynamics of Dengue Disease Severity Determined by the Interplay Between Viral Genetics and Serotype-Specific Immunity by Molly OhAinle, Ángel Balmaseda, Alexander R. Macalalad, Yolanda Téllez, Michael C. Zody, Saira Saborío, Andrea C. Nunez, Niall J. Lennon, Susan J. Birren, Aubree Gordon, Matthew R. Henn, Eva Harris

    Published 2011
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  18. 18
    Genomic Patterns of De Novo Mutation in Simplex Autism

    Genomic Patterns of De Novo Mutation in Simplex Autism by Tychele N. Turner, Bradley P. Coe, Diane E. Dickel, Kendra Hoekzema, Bradley J. Nelson, Michael C. Zody, Zev Kronenberg, Fereydoun Hormozdiari, Archana N. Raja, L Pennacchio, Robert B. Darnell, Evan E. Eichler

    Published 2017
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  19. 19
    Fluid Spatial Dynamics of West Nile Virus in the United States: Rapid Spread in a Permissive Host Environment

    Fluid Spatial Dynamics of West Nile Virus in the United States: Rapid Spread in a Permissive Host Environment by Francesca Di Giallonardo, Jemma L. Geoghegan, Douglas E. Docherty, Robert G. McLean, Michael C. Zody, James Qu, Xiao Yang, Susan J. Birren, Christine M. Malboeuf, Ruchi M. Newman, Hon S. Ip, Edward C. Holmes

    Published 2015
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  20. 20
    Genomic analysis of 116 autism families strengthens known risk genes and highlights promising candidates

    Genomic analysis of 116 autism families strengthens known risk genes and highlights promising candidates by Marta Viggiano, Fabiola Ceroni, Paola Visconti, Annio Posar, Maria Cristina Scaduto, Laura Sandoni, Irene Baravelli, Cinzia Cameli, Magali Jane Rochat, Alessandra Maresca, Alessandro Vaisfeld, Davide Gentilini, Luciano Calzari, Valério Carelli, Michael C. Zody, Elena Maestrini, Elena Bacchelli

    Published 2024
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