Sökresultat - McLellan, Michael D.

PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data av Chen, Ken, McLellan, Michael D., Ding, Li, Wendl, Michael C., Kasai, Yumi, Wilson, Richard K., Mardis, Elaine R.

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MSIsensor: microsatellite instability detection using paired tumor-normal sequence data av Niu, Beifang, Ye, Kai, Zhang, Qunyuan, Lu, Charles, Xie, Mingchao, McLellan, Michael D., Wendl, Michael C., Ding, Li

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VarScan: variant detection in massively parallel sequencing of individual and pooled samples av Koboldt, Daniel C., Chen, Ken, Wylie, Todd, Larson, David E., McLellan, Michael D., Mardis, Elaine R., Weinstock, George M., Wilson, Richard K., Ding, Li

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VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing av Koboldt, Daniel C., Zhang, Qunyuan, Larson, David E., Shen, Dong, McLellan, Michael D., Lin, Ling, Miller, Christopher A., Mardis, Elaine R., Ding, Li, Wilson, Richard K.

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Clonal Evolution Revealed by Whole Genome Sequencing in a Case of Primary Myelofibrosis Transformed to Secondary Acute Myeloid Leukemia av Engle, Elizabeth K., Fisher, Daniel A.C., Miller, Christopher A., McLellan, Michael D., Fulton, Robert S., Moore, Deborah M., Wilson, Richard K., Ley, Timothy J., Oh, Stephen T.

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BreakPoint Surveyor: a pipeline for structural variant visualization av Wyczalkowski, Matthew A, Wylie, Kristine M, Cao, Song, McLellan, Michael D, Flynn, Jennifer, Huang, Mo, Ye, Kai, Fan, Xian, Chen, Ken, Wendl, Michael C, Ding, Li

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HPV-EM: an accurate HPV detection and genotyping EM algorithm av Inkman, Matthew J., Jayachandran, Kay, Ellis, Thomas M., Ruiz, Fiona, McLellan, Michael D., Miller, Christopher A., Wu, Yufeng, Ojesina, Akinyemi I., Schwarz, Julie K., Zhang, Jin

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HPV transcript expression affects cervical cancer response to chemoradiation av Ruiz, Fiona J., Inkman, Matthew, Rashmi, Ramachandran, Muhammad, Naoshad, Gabriel, Nishanth, Miller, Christopher A., McLellan, Michael D., Goldstein, Michael, Markovina, Stephanie, Grigsby, Perry W., Zhang, Jin, Schwarz, Julie K.

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CMDS: a population-based method for identifying recurrent DNA copy number aberrations in cancer from high-resolution data av Zhang, Qunyuan, Ding, Li, Larson, David E., Koboldt, Daniel C., McLellan, Michael D., Chen, Ken, Shi, Xiaoqi, Kraja, Aldi, Mardis, Elaine R., Wilson, Richard K., Borecki, Ingrid B., Province, Michael A.

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Identification of a pan-cancer oncogenic microRNA superfamily anchored by a central core seed motif av Hamilton, Mark P., Rajapakshe, Kimal, Hartig, Sean M., Reva, Boris, McLellan, Michael D., Kandoth, Cyriac, Ding, Li, Zack, Travis I., Gunaratne, Preethi H., Wheeler, David A., Coarfa, Cristian, McGuire, Sean E.

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Clinical outcomes and differential effects of PI3K pathway mutation in obese versus non-obese patients with cervical cancer av Grigsby, Perry, Elhammali, Adnan, Ruiz, Fiona, Markovina, Stephanie, McLellan, Michael D., Miller, Christopher A., Chundury, Anupama, Ta, Ngoc-Anh L., Rashmi, Ramachandran, Pfeifer, John D., Fulton, Robert S., DeWees, Todd, Schwarz, Julie K.

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Pan-cancer analysis of somatic mutations across 21 neuroendocrine tumor types av Cao, Yanan, Zhou, Weiwei, Li, Lin, Wang, Jiaqian, Gao, Zhibo, Jiang, Yiran, Jiang, Xiuli, Shan, Aijing, Bailey, Matthew H., Huang, Kuan-lin, Sun, Sam Q., McLellan, Michael D., Niu, Beifang, Wang, Weiqing, Ding, Li, Ning, Guang

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Somatic neurofibromatosis type 1 (NF1) inactivation characterizes NF1-associated pilocytic astrocytoma av Gutmann, David H., McLellan, Michael D., Hussain, Ibrahim, Wallis, John W., Fulton, Lucinda L., Fulton, Robert S., Magrini, Vincent, Demeter, Ryan, Wylie, Todd, Kandoth, Cyriac, Leonard, Jeffrey R., Guha, Abhijit, Miller, Christopher A., Ding, Li, Mardis, Elaine R.

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Novel MEK1 Mutation Identified by Mutational Analysis of Epidermal Growth Factor Receptor Signaling Pathway Genes in Lung Adenocarcinoma av Marks, Jenifer L., Gong, Yixuan, Chitale, Dhananjay, Golas, Ben, McLellan, Michael D., Kasai, Yumi, Ding, Li, Mardis, Elaine R., Wilson, Richard K., Solit, David, Levine, Ross, Michel, Kathrin, Thomas, Roman K., Rusch, Valerie W., Ladanyi, Marc, Pao, William

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BreakTrans: uncovering the genomic architecture of gene fusions av Chen, Ken, Navin, Nicholas E, Wang, Yong, Schmidt, Heather K, Wallis, John W, Niu, Beifang, Fan, Xian, Zhao, Hao, McLellan, Michael D, Hoadley, Katherine A, Mardis, Elaine R, Ley, Timothy J, Perou, Charles M, Wilson, Richard K, Ding, Li

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BreakDancer: An algorithm for high resolution mapping of genomic structural variation av Chen, Ken, Wallis, John W., McLellan, Michael D., Larson, David E., Kalicki, Joelle M., Pohl, Craig S., McGrath, Sean D., Wendl, Michael C., Zhang, Qunyuan, Locke, Devin P., Shi, Xiaoqi, Fulton, Robert S., Ley, Timothy J., Wilson, Richard K., Ding, Li, Mardis, Elaine R.

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Protein structure guided discovery of functional mutations across 19 cancer types av Niu, Beifang, Scott, Adam D., Sengupta, Sohini, Bailey, Matthew H., Batra, Prag, Ning, Jie, Wyczalkowski, Matthew A., Liang, Wen-Wei, Zhang, Qunyuan, McLellan, Michael D., Sun, Sam Q., Tripathi, Piyush, Lou, Carolyn, Ye, Kai, Mashl, R. Jay, Wallis, John, Wendl, Michael C., Chen, Feng, Ding, Li

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Mutational Analysis of EGFR and Related Signaling Pathway Genes in Lung Adenocarcinomas Identifies a Novel Somatic Kinase Domain Mutation in FGFR4 av Marks, Jenifer L., McLellan, Michael D., Zakowski, Maureen F., Lash, Alex E., Kasai, Yumi, Broderick, Stephen, Sarkaria, Inderpal S., Pham, DuyKhanh, Singh, Bhuvanesh, Miner, Tracie L., Fewell, Ginger A., Fulton, Lucinda L., Mardis, Elaine R., Wilson, Richard K., Kris, Mark G., Rusch, Valerie W., Varmus, Harold, Pao, William

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Systematic Discovery of Complex Indels in Human Cancers av Ye, Kai, Wang, Jiayin, Jayasinghe, Reyka, Lameijer, Eric-Wubbo, McMichael, Joshua F., Ning, Jie, McLellan, Michael D., Xie, Mingchao, Cao, Song, Yellapantula, Venkata, Huang, Kuan-lin, Scott, Adam, Foltz, Steven, Niu, Beifang, Johnson, Kimberly J., Moed, Matthijs, Slagboom, P. Eline, Chen, Feng, Wendl, Michael C., Ding, Li

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Mutational landscape and significance across 12 major cancer types av Kandoth, Cyriac, McLellan, Michael D., Vandin, Fabio, Ye, Kai, Niu, Beifang, Lu, Charles, Xie, Mingchao, Zhang, Qunyuan, McMichael, Joshua F., Wyczalkowski, Matthew A., Leiserson, Mark D. M., Miller, Christopher A., Welch, John S., Walter, Matthew J., Wendl, Michael C., Ley, Timothy J., Wilson, Richard K., Raphael, Benjamin J., Ding, Li

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