نتائج البحث - Matthias Lienhard

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  1. 1
    Analyzing and interpreting genome data at the network level with ConsensusPathDB

    Analyzing and interpreting genome data at the network level with ConsensusPathDB حسب Ralf Herwig, Christopher Hardt, Matthias Lienhard, Atanas Kamburov

    منشور في 2016
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  2. 2
    IsoTools 2.0: software for comprehensive analysis of long-read transcriptome sequencing data

    IsoTools 2.0: software for comprehensive analysis of long-read transcriptome sequencing data حسب Yalan Bi, Tom Lukas Lankenau, Matthias Lienhard, Ralf Herwig

    منشور في 2025
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  3. 3
    MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments

    MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments حسب Matthias Lienhard, Christina Grimm, Markus Morkel, Ralf Herwig, Lukas Chávez

    منشور في 2013
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  4. 4
    IsoTools: a flexible workflow for long-read transcriptome sequencing analysis

    IsoTools: a flexible workflow for long-read transcriptome sequencing analysis حسب Matthias Lienhard, Twan van den Beucken, Bernd Timmermann, Myriam Hochradel, Stefan T. Börno, Florian Caiment, Martin Vingron, Ralf Herwig

    منشور في 2023
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  5. 5
    RNA-Seq Provides New Insights in the Transcriptome Responses Induced by the Carcinogen Benzo[a]pyrene

    RNA-Seq Provides New Insights in the Transcriptome Responses Induced by the Carcinogen Benzo[a]pyrene حسب Joost van Delft, Stan Gaj, Matthias Lienhard, M. W. Albrecht, A. A. Kirpiy, Karen Brauers, Sandra M.H. Claessen, Daneida Lizárraga, H. Lehrach, Ralf Herwig, Jos Kleinjans

    منشور في 2012
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  6. 6
    Simultaneous deletion of the methylcytosine oxidases Tet1 and Tet3 increases transcriptome variability in early embryogenesis

    Simultaneous deletion of the methylcytosine oxidases Tet1 and Tet3 increases transcriptome variability in early embryogenesis حسب Jinsuk Kang, Matthias Lienhard, William A. Pastor, Ashu Chawla, Mark Novotny, Ageliki Tsagaratou, Roger S. Lasken, Elizabeth C. Thompson, M. Azim Surani, Sergei B. Koralov, Sundeep Kalantry, Lukas Chávez, Anjana Rao

    منشور في 2015
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  7. 7
    QSEA—modelling of genome-wide DNA methylation from sequencing enrichment experiments

    QSEA—modelling of genome-wide DNA methylation from sequencing enrichment experiments حسب Matthias Lienhard, Sabrina Grasse, Jana Rolff, Steffen Frese, Uwe Schirmer, Michael W. Becker, Stefan Börno, Bernd Timmermann, Lukas Chávez, Holger Sültmann, Gunda Leschber, Iduna Fichtner, Michal R. Schweiger, Ralf Herwig

    منشور في 2016
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  8. 8
    DMSO induces drastic changes in human cellular processes and epigenetic landscape in vitro

    DMSO induces drastic changes in human cellular processes and epigenetic landscape in vitro حسب Marcha Verheijen, Matthias Lienhard, Yannick Schrooders, Olivia Clayton, Ramona Nudischer, Stefan Boerno, Bernd Timmermann, Nathalie Selevsek, Ralph Schlapbach, Hans Gmuender, Stefano Gotta, Joep Geraedts, Ralf Herwig, J. Kleinjans, Florian Caiment

    منشور في 2019
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  9. 9
    Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility

    Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility حسب Grégory Seumois, Lukas Chávez, Анна Герасимова, Matthias Lienhard, Nada Omran, Lukas Kalinke, Maria Vedanayagam, Asha Purnima Veerappan Ganesan, Ashu Chawla, Ratko Djukanović, K. Mark Ansel, Bjoern Peters, Anjana Rao, Pandurangan Vijayanand

    منشور في 2014
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  10. 10
    The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine

    The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine حسب Jean‐Pierre Etchegaray, Lukas Chávez, Yun Huang, Kenneth N. Ross, Jiho Choi, Bárbara Martínez-Pastor, Ryan Walsh, Cesar Sommer, Matthias Lienhard, Adrianne D. Gladden, Sita Kugel, Dafne M. Silberman, Sridhar Ramaswamy, Gustavo Mostoslavsky, Konrad Hochedlinger, Alon Goren, Anjana Rao, Raúl Mostoslavsky

    منشور في 2015
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  11. 11
    Epigenomic profiling of non-small cell lung cancer xenografts uncover LRP12 DNA methylation as predictive biomarker for carboplatin resistance

    Epigenomic profiling of non-small cell lung cancer xenografts uncover LRP12 DNA methylation as predictive biomarker for carboplatin resistance حسب Sabrina Grasse, Matthias Lienhard, Steffen Frese, Martin Kerick, Anne Steinbach, Christina Grimm, Michelle Hussong, Jana Rolff, Michael W. Becker, Felix Dreher, Uwe Schirmer, Stefan Boerno, Anna Ramisch, Gunda Leschber, Bernd Timmermann, Christian Grohé, H Lüders, Martin Vingron, Iduna Fichtner, Sebastian Klein, Margarete Odenthal, Reinhard Büttner, Hans Lehrach, Holger Sültmann, Ralf Herwig, Michal R. Schweiger

    منشور في 2018
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  12. 12
    Deregulation and epigenetic modification of BCL2-family genes cause resistance to venetoclax in hematologic malignancies

    Deregulation and epigenetic modification of BCL2-family genes cause resistance to venetoclax in hematologic malignancies حسب Daniel Thomalla, Laura Beckmann, Christina Grimm, Matteo Oliverio, Lydia Meder, Carmen D. Herling, Pascal Nieper, T. Feldmann, Olaf Merkel, Eva Lorsy, Alexandra da Palma Guerreiro, J. von Jan, Ilmars Kisis, Elena Wasserburger, Julia Claasen, E. Faitschuk-Meyer, Janine Altmüller, Peter Nürnberg, T.-P. Yang, Matthias Lienhard, Ralf Herwig, K.-A. Kreuzer, Christian P. Pallasch, Reinhard Büttner, Stephan Schäfer, John C. Hartley, Hinrich Abken, Martin Peifer, H. Kashkar, Gero Knittel, Barbara Eichhorst, Roland T. Ullrich, Marco Herling, Hans Christian Reinhardt, Michael Hallek, Michal R. Schweiger, Lukas P. Frenzel

    منشور في 2022
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  13. 13
    Network integration and modelling of dynamic drug responses at multi-omics levels

    Network integration and modelling of dynamic drug responses at multi-omics levels حسب Nathalie Selevsek, Florian Caiment, Ramona Nudischer, Hans Gmuender, Irina Agarkova, Francis Atkinson, Ivo Bachmann, Vanessa Baier, Gal Barel, Chris Bauer, Stefan Boerno, Nicolas Bosc, Olivia Clayton, Henrik Cordes, Sally J. Deeb, Stefano Gotta, Patrick Guye, Anne Hersey, Fiona Hunter, Laura Kunz, Alexandre Lewalle, Matthias Lienhard, Jort J. Merken, Jasmine Minguet, Bernardo Lino de Oliveira, Carla Pluess, Uğis Sarkans, Yannick Schrooders, Johannes Schuchhardt, Ines Smit, Christoph Thiel, Bernd Timmermann, Marcha Verheijen, Timo Wittenberger, Witold Wolski, Alexandra Zerck, Stéphane Heymans, Lars Kuepfer, Adrian Roth, Ralph Schlapbach, Steven Niederer, Ralf Herwig, Jos Kleinjans

    منشور في 2020
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  14. 14
    Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling

    Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling حسب Stephen C. Mack, Kristian W. Pajtler, Lukas Chávez, Konstantin Okonechnikov, Kelsey C. Bertrand, Xiuxing Wang, Serap Erkek, Alexander Federation, Anne Song, Christine Lee, Xin Wang, Laura McDonald, James J. Morrow, Alina Saiakhova, Patrick Sin‐Chan, Qiulian Wu, Kulandaimanuvel Antony Michealraj, Tyler E. Miller, Christopher G. Hubert, Marina Ryzhova, Livia Garzia, Laura Donovan, Stephen M. Dombrowski, Daniel C. Factor, Betty Luu, Claudia L.L. Valentim, Ryan C. Gimple, Andrew R. Morton, Leo J.Y. Kim, Briana C. Prager, John J. Y. Lee, Xiaochong Wu, Jennifer Zuccaro, Yuan Thompson, Borja Holgado, Jüri Reimand, Susan Q. Ke, Adam Tropper, Sisi Lai, Senthuran Vijayarajah, Sylvia Doan, Vaidehi Mahadev, Ana Fernández‐Miñán, Susanne Gröbner, Matthias Lienhard, Marc Zapatka, Zhiqin Huang, Kenneth Aldape, Ángel M. Carcaboso, Peter J. Houghton, Stephen T. Keir, Till Milde, Hendrik Witt, Yan Li, Chaojun Li, Xiu‐Wu Bian, David Jones, Ian C. Scott, Sheila K. Singh, Annie Huang, Peter B. Dirks, Éric Bouffet, James E. Bradner, Vijay Ramaswamy, Nada Jabado, James T. Rutka, Paul A. Northcott, Mathieu Lupien, Peter Lichter, Andrey Korshunov, Peter C. Scacheri, Stefan M. Pfister, Marcel Kool, Michael D. Taylor, Jeremy N. Rich

    منشور في 2017
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  15. 15
    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification حسب Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams, Jane Loveland, Maite De María, Matthew S. Adams, Gabriela Balderrama-Gutierrez, Amit K. Behera, José M. González, Toby Hunt, Julien Lagarde, Cindy Liang, Haoran Li, Marcus J. Meade, David A. Moraga Amador, Andrey D. Prjibelski, İnanç Birol, Hamed Bostan, Ashley Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R. M. Du, Colette Felton, Jonathan Göke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian‐Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella-Gutiérrez, Namrita Dhillon, Jose M. Fernandez-Gonzalez, Luis Ferrández-Peral, Natàlia García‐Reyero, Stefan Goetz, Carles Hernández-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Eric C. Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Smith, Marie‐Marthe Suner, Hazuki Takahashi, Ingrid Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Margaret E. Hunter, Hagen Tilgner, B Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria Sheynkman, A Mortazavi, Ana Conesa, Angela N. Brooks

    منشور في 2023
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  16. 16
    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification حسب Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams, Jane Loveland, Maite De María, Matthew S. Adams, Gabriela Balderrama-Gutierrez, Amit K. Behera, José M. González, Toby Hunt, Julien Lagarde, Cindy Liang, Haoran Li, Marcus J. Meade, David A. Moraga Amador, Andrey D. Prjibelski, İnanç Birol, Hamed Bostan, Ashley M. Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R. M. Du, Colette Felton, Jonathan Göke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian‐Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella-Gutiérrez, Alyssa Cousineau, Namrita Dhillon, José M. Fernández, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernández-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C. Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Smith, Marie‐Marthe Suner, Hazuki Takahashi, Ingrid Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Margaret E. Hunter, René Maehr, Yin Shen, Hagen Tilgner, B Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria Sheynkman, A Mortazavi, Ana Conesa, Angela N. Brooks

    منشور في 2024
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