Výsledky vyhledávání - Matthew D. Edwards

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  1. 1
    High-resolution genetic mapping with pooled sequencing

    High-resolution genetic mapping with pooled sequencing Autor Matthew D. Edwards, David K. Gifford

    Vydáno 2012
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  2. 2
    Convolutional neural network architectures for predicting DNA–protein binding

    Convolutional neural network architectures for predicting DNA–protein binding Autor Haoyang Zeng, Matthew D. Edwards, Ge Liu, David K. Gifford

    Vydáno 2016
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  3. 3
    An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding

    An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding Autor Shaun Mahony, Matthew D. Edwards, Esteban O. Mazzoni, Richard I. Sherwood, Akshay Kakumanu, Carolyn A. Morrison, Hynek Wichterle, David K. Gifford

    Vydáno 2014
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  4. 4
    High-throughput mapping of regulatory DNA

    High-throughput mapping of regulatory DNA Autor Nisha Rajagopal, Sharanya Srinivasan, Kameron Kooshesh, Yuchun Guo, Matthew D. Edwards, Budhaditya Banerjee, Tahin Syed, Bart J M Emons, David K. Gifford, Richard I. Sherwood

    Vydáno 2016
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  5. 5
    Determination of RNA structural diversity and its role in HIV-1 RNA splicing

    Determination of RNA structural diversity and its role in HIV-1 RNA splicing Autor Phillip J. Tomezsko, Vincent Corbin, Paromita Gupta, Harish Swaminathan, Margalit Glasgow, Sitara Persad, Matthew D. Edwards, Lachlan McIntosh, Anthony T. Papenfuss, Ann Emery, Ronald Swanstrom, Trinity Zang, Tammy C. T. Lan, Paul D. Bieniasz, Daniel R. Kuritzkes, Athe Tsibris, Silvi Rouskin

    Vydáno 2020
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  6. 6
    Predicting gene expression in massively parallel reporter assays: A comparative study

    Predicting gene expression in massively parallel reporter assays: A comparative study Autor Anat Kreimer, Haoyang Zeng, Matthew D. Edwards, Yuchun Guo, Kevin Tian, Sunyoung Shin, Rene Welch, Michael Wainberg, Rahul Mohan, Nicholas A. Sinnott‐Armstrong, Yue Li, Gökçen Eraslan, Talal Bin Amin, Ryan Tewhey, Pardis C. Sabeti, Jonathan Göke, Nikola S. Mueller, Manolis Kellis, Anshul Kundaje, M Beer, Sündüz Keleş, David K. Gifford, Nir Yosef

    Vydáno 2017
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  7. 7
    Toward a Mobile Platform for Real-world Digital Measurement of Depression: User-Centered Design, Data Quality, and Behavioral and Clinical Modeling

    Toward a Mobile Platform for Real-world Digital Measurement of Depression: User-Centered Design, Data Quality, and Behavioral and Clinical Modeling Autor Stefanie Nickels, Matthew D. Edwards, Sarah Poole, Dale Winter, Jessica Gronsbell, Bella Rozenkrants, David P Miller, Mathias S. Fleck, Alan A. McLean, B. Peterson, Yuanwei Chen, Alan Hwang, David Rust-Smith, Arthur Brant, Andrew T. Campbell, Chen Chen, Collin Walter, Patricia A. Areán, Honor Hsin, Lance Myers, William J. Marks, Jessica L. Mega, Danielle Schlosser, Andrew Conrad, Robert M. Califf, Menachem Fromer

    Vydáno 2021
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  8. 8
    Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges

    Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges Autor Roxana Daneshjou, Yanran Wang, Yana Bromberg, Samuele Bovo, Pier Luigi Martelli, Giulia Babbi, Pietro Di Lena, Rita Casadio, Matthew D. Edwards, David K. Gifford, David T. Jones, Laksshman Sundaram, Rajendra R. Bhat, Xiaolin Li, Lipika R. Pal, Kunal Kundu, Yizhou Yin, John Moult, Chen-Hsin Albert Yu, Vikas Pejaver, Kymberleigh A. Pagel, Biao Li, Sean D. Mooney, Predrag Radivojac, Sohela Shah, Marco Carraro, Alessandra Gasparini, Emanuela Leonardi, Manuel Giollo, Carlo Ferrari, Silvio C. E. Tosatto, Eran Bachar, Johnathan R. Azaria, Yanay Ofran, Ron Unger, Abhishek Niroula, Mauno Vihinen, Billy Chang, Maggie Haitian Wang, André Franke, Britt‐Sabina Petersen, Mehdi Pirooznia, Peter P. Zandi, W. Richard McCombie, James B. Potash, Russ B. Altman, Teri E. Klein, Roger A. Hoskins, Susanna Repo, Steven E. Brenner, Alexander A. Morgan

    Vydáno 2017
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  9. 9
    Perspectives on ENCODE

    Perspectives on ENCODE Autor Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal, Bronwen Aken, Rizi Ai, Jennifer A. Akiyama, Omar Al Jammal, Henry Amrhein, Stacie M. Anderson, Gregory R. Andrews, Igor Antoshechkin, Kristin Ardlie, Joel Armstrong, Matthew Astley, Budhaditya Banerjee, Amira Barkal, If H. A. Barnes, Iros Barozzi, Daniel Barrell, Gemma Barson, Daniel J. Bates, Ulugbek K. Baymuradov, Cassandra Bazile, M Beer, Samantha Beik, M. A. Bender, Ruth Bennett, Louis Philip Benoit Bouvrette, B Bernstein, Andrew Berry, Anand Bhaskar, Alexandra Bignell, Steven M. Blue, David M. Bodine, Carles Boix, Nathan Boley, Tyler Borrman, Beatrice Borsari, Alan P. Boyle, Laurel A. Brandsmeier, Alessandra Breschi, Emery H. Bresnick, Jason A. Brooks, Michael Buckley, Christopher B. Burge, Rachel Byron, Eileen Cahill, Lingling Cai, Lulu Cao, Mark Carty, Rosa Castanon, Andrés Castillo, Hassan Chaı̈b, Esther T. Chan, Daniel R. Chee, Sora Chee, Hao Chen, Huaming Chen, Jiayu Chen, Songjie Chen, J. Michael Cherry, Surya B. Chhetri, Jyoti S. Choudhary, Jacqueline Chrast, Dongjun Chung, Declan Clarke, Neal Cody, Candice J. Coppola, Julie Coursen, Anthony D’Ippolito, Stephen Dalton, Cassidy Danyko, Claire Davidson, José Dávila-Velderrain, Carrie Davis, Job Dekker, Alden Deran, Gilberto DeSalvo, Gloria Despacio-Reyes, Colin N. Dewey, Diane E. Dickel, Morgan Diegel, Mark Diekhans, Vishnu Dileep, Bo Ding, Sarah Djebali, Alexander Dobin, Daniel Domı́nguez, Sarah Donaldson, Jörg Drenkow, Timothy R. Dreszer, Yotam Drier, Michael O. Duff, Douglass Dunn, Catharine Eastman, Joseph R. Ecker, Matthew D. Edwards, Nicole El-Ali

    Vydáno 2020
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  10. 10
    Expanded encyclopaedias of DNA elements in the human and mouse genomes

    Expanded encyclopaedias of DNA elements in the human and mouse genomes Autor Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal, Rizi Ai, Bronwen Aken, Jennifer A. Akiyama, Omar Al Jammal, Henry Amrhein, Stacie M. Anderson, Gregory R. Andrews, Igor Antoshechkin, Kristin Ardlie, Joel Armstrong, Matthew Astley, Budhaditya Banerjee, Amira Barkal, If H. A. Barnes, Iros Barozzi, Daniel Barrell, Gemma Barson, Daniel J. Bates, Ulugbek K. Baymuradov, Cassandra Bazile, M Beer, Samantha Beik, M. A. Bender, Ruth Bennett, Louis Philip Benoit Bouvrette, B Bernstein, Andrew Berry, Anand Bhaskar, Alexandra Bignell, Steven M. Blue, David M. Bodine, Carles Boix, Nathan Boley, Tyler Borrman, Beatrice Borsari, Alan P. Boyle, Laurel A. Brandsmeier, Alessandra Breschi, Emery H. Bresnick, Jason A. Brooks, Michael Buckley, Christopher B. Burge, Rachel Byron, Eileen Cahill, Lingling Cai, Lulu Cao, Mark Carty, Rosa G. Castanon, Andres Castillo, Hassan Chaı̈b, Esther T. Chan, Daniel R. Chee, Sora Chee, Hao Chen, Huaming Chen, Jiayu Chen, Songjie Chen, J. Michael Cherry, Surya B. Chhetri, Jyoti S. Choudhary, Jacqueline Chrast, Dongjun Chung, Declan Clarke, Neal Cody, Candice J. Coppola, Julie Coursen, Anthony D’Ippolito, Stephen Dalton, Cassidy Danyko, Claire Davidson, José Dávila-Velderrain, Carrie Davis, Job Dekker, Alden Deran, Gilberto DeSalvo, Gloria Despacio-Reyes, Colin N. Dewey, Diane E. Dickel, Morgan Diegel, Mark Diekhans, Vishnu Dileep, Bo Ding, Sarah Djebali, Alexander Dobin, Daniel Domı́nguez, Sarah Donaldson, Jörg Drenkow, Timothy R. Dreszer, Yotam Drier, Michael O. Duff, Douglass Dunn, Catharine Eastman, Joseph R. Ecker, Matthew D. Edwards, Nicole El-Ali

    Vydáno 2020
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  11. 11
    CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

    CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods Autor Shantanu Jain, Constantina Bakolitsa, Steven E. Brenner, Predrag Radivojac, John Moult, Susanna Repo, Roger A. Hoskins, Gaia Andreoletti, Daniel Barsky, Ajithavalli Chellapan, Hoyin Chu, Navya Dabbiru, Naveen K. Kollipara, Melissa Ly, Andrew J. Neumann, Lipika R. Pal, Eric Odell, Gaurav Pandey, Robin C. Peters-Petrulewicz, Rajgopal Srinivasan, Stephen F. Yee, Sri Jyothsna Yeleswarapu, Maya Zuhl, Ogün Adebalı, Ayoti Patra, M Beer, Raghavendra Hosur, Jian Peng, Brady Bernard, M. Victoria Berry, Shengcheng Dong, Alan P. Boyle, Aashish N. Adhikari, Jingqi Chen, Zhiqiang Hu, Robert Wang, Yaqiong Wang, Max J. Miller, Yanran Wang, Yana Bromberg, Paola Turina, Emidio Capriotti, James J. Han, Kıvılcım Öztürk, Hannah Carter, Giulia Babbi, Samuele Bovo, Pietro Di Lena, Pier Luigi Martelli, Castrense Savojardo, Rita Casadio, Melissa Cline, Greet De Baets, Sandra Bonache, Orland Dı́ez, Sara Gutiérrez‐Enríquez, Alejandro Fernández, Gemma Montalban, Lars Ootes, Selen Özkan, Natàlia Padilla, Casandra Riera, Xavier de la Cruz, Mark Diekhans, Peter J. Huwe, Qiong Wei, Qifang Xu, Roland L. Dunbrack, Valer Gotea, Laura Elnitski, Gennady Margolin, Piero Fariselli, Ivan V. Kulakovskiy, Vsevolod J. Makeev, Dmitry Penzar, Ilya E. Vorontsov, Alexander V. Favorov, Julia Forman, Marcia A. Hasenahuer, Marı́a Silvina Fornasari, Gustavo Parisi, Žiga Avsec, Muhammed Hasan Çelik, Thi Yen Duong Nguyen, Julien Gagneur, Fangyuan Shi, Matthew D. Edwards, Yuchun Guo, Kevin Tian, Haoyang Zeng, David K. Gifford, Jonathan Göke, Jan Zaucha, Julian Gough, Graham R. S. Ritchie, Adam Frankish, Jonathan M. Mudge, Jennifer Harrow, Erin L. Young, Yao Yu

    Vydáno 2024
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