Výsledky vyhledávání - Marcel Huntemann

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  1. 1
    Large-scale contamination of microbial isolate genomes by Illumina PhiX control

    Large-scale contamination of microbial isolate genomes by Illumina PhiX control Autor Supratim Mukherjee, Marcel Huntemann, Natalia Ivanova, Nikos C. Kyrpides, Amrita Pati

    Vydáno 2015
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  2. 2
    Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake

    Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake Autor Timothy J. Williams, Michelle A. Allen, Natalia Ivanova, Marcel Huntemann, Sabrina Haque, Alyce M. Hancock, Sarah Brazendale, Ricardo Cavicchioli

    Vydáno 2021
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  3. 3
    Genome-Based Taxonomic Classification of Bacteroidetes

    Genome-Based Taxonomic Classification of Bacteroidetes Autor Richard L. Hahnke, Jan P. Meier‐Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia Ivanova, Tanja Woyke, Nikos C. Kyrpides, Hans‐Peter Klenk, Markus Göker

    Vydáno 2016
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  4. 4
    The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)

    The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) Autor Marcel Huntemann, Natalia Ivanova, Konstantinos Mavromatis, H. James Tripp, David Páez-Espino, Krishna Palaniappan, Ernest Szeto, Manoj Pillay, I-Min A. Chen, Amrita Pati, Torben Nielsen, Victor Markowitz, Nikos C. Kyrpides

    Vydáno 2015
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  5. 5
    Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system

    Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system Autor I-Min A. Chen, Victor Markowitz, Krishna Palaniappan, Ernest Szeto, Ken Chu, Jinghua Huang, Anna Ratner, Manoj Pillay, Michalis Hadjithomas, Marcel Huntemann, Natalia Mikhailova, Galina Ovchinnikova, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2016
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  6. 6
    The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)

    The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4) Autor Marcel Huntemann, Natalia Ivanova, Konstantinos Mavromatis, H. James Tripp, David Páez-Espino, Kristin Tennessen, Krishna Palaniappan, Ernest Szeto, Manoj Pillay, I-Min A. Chen, Amrita Pati, Torben Nielsen, Victor Markowitz, Nikos C. Kyrpides

    Vydáno 2016
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  7. 7
    Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae

    Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae Autor Alla Lapidus, Alicia Clum, Kurt LaButti, Marina G. Kaluzhnaya, Sujung Lim, David A. C. Beck, Tijana Glavina Del Rio, Matt Nolan, Konstantinos Mavromatis, Marcel Huntemann, Susan Lucas, Mary E. Lidstrom, Natalia Ivanova, Ludmila Chistoserdova

    Vydáno 2011
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  8. 8
    The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities

    The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities Autor I-Min A. Chen, Ken Chu, Krishna Palaniappan, Anna Ratner, Jinghua Huang, Marcel Huntemann, Patrick Hajek, Stephan Ritter, Neha Varghese, R. Seshadri, Simon Roux, Tanja Woyke, Emiley A. Eloe‐Fadrosh, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2020
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  9. 9
    IMG 4 version of the integrated microbial genomes comparative analysis system

    IMG 4 version of the integrated microbial genomes comparative analysis system Autor Victor Markowitz, I-Min A. Chen, Krishna Palaniappan, Ken Chu, Ernest Szeto, Manoj Pillay, Anna Ratner, Jinghua Huang, Tanja Woyke, Marcel Huntemann, Iain Anderson, Konstantinos Billis, Neha Varghese, Konstantinos Mavromatis, Amrita Pati, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2013
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  10. 10
    IMG: the integrated microbial genomes database and comparative analysis system

    IMG: the integrated microbial genomes database and comparative analysis system Autor Victor Markowitz, I.-M. A. Chen, Krishna Palaniappan, K. Y. Chu, Ernest Szeto, Yuri Grechkin, А. В. Ратнер, Breno Pinheiro Jacob, Jinghua Huang, Philip G. Williams, Marcel Huntemann, Iain A. Anderson, Konstantinos Mavromatis, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2011
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  11. 11
    IMG/M: the integrated metagenome data management and comparative analysis system

    IMG/M: the integrated metagenome data management and comparative analysis system Autor Victor Markowitz, I.-M. A. Chen, Kung‐Hui Chu, Ernest Szeto, Krishna Palaniappan, Yuri Grechkin, А. В. Ратнер, Breno Pinheiro Jacob, A. Pati, Marcel Huntemann, Konstantinos Liolios, I. Pagani, Iain Anderson, Kostantinos Mavromatis, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2011
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  12. 12
    IMG/M 4 version of the integrated metagenome comparative analysis system

    IMG/M 4 version of the integrated metagenome comparative analysis system Autor Victor Markowitz, I-Min A. Chen, Ken Chu, Ernest Szeto, Krishna Palaniappan, Manoj Pillay, Anna Ratner, Jinghua Huang, Ioanna Pagani, Susannah G. Tringe, Marcel Huntemann, Konstantinos Billis, Neha Varghese, Kristin Tennessen, Konstantinos Mavromatis, Amrita Pati, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2013
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  13. 13
    Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China

    Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China Autor Xiaoyang Gao, Zhi Xiao, Hong-Wei Li, Yu Zhou, Alla Lapidus, James Han, Matthew Haynes, Elizabeth A. Lobos, Marcel Huntemann, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Brian J. Tindall, Victor Markowitz, Tanja Woyke, Hans-Peter Klenk, Nikos C. Kyrpides, Wen-Jun Li

    Vydáno 2015
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  14. 14
    IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes

    IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes Autor I-Min A. Chen, Ken Chu, Krishna Palaniappan, Manoj Pillay, Anna Ratner, Jinghua Huang, Marcel Huntemann, Neha Varghese, James R. White, R. Seshadri, Tatyana I. Smirnova, Edward Kirton, Sean P. Jungbluth, Tanja Woyke, Emiley A. Eloe‐Fadrosh, Natalia Ivanova, Nikos C. Kyrpides

    Vydáno 2018
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  15. 15
    Complete Genome Sequence of Clostridium clariflavum DSM 19732

    Complete Genome Sequence of Clostridium clariflavum DSM 19732 Autor Javier A. Izquierdo, Lynne Goodwin, Karen W. Davenport, Hazuki Teshima, David Bruce, Chris Detter, Roxanne Tapia, Cliff Han, Miriam Land, Loren Hauser, Cynthia D. Jeffries, James Han, Sam Pitluck, Matt Nolan, Amy Chen, Marcel Huntemann, Konstantinos Mavromatis, Natalia Mikhailova, Konstantinos Liolios, Tanja Woyke, Lee R. Lynd

    Vydáno 2012
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  16. 16
    DOE JGI Metagenome Workflow

    DOE JGI Metagenome Workflow Autor Alicia Clum, Marcel Huntemann, Brian Bushnell, Brian Foster, Bryce Foster, Simon Roux, Patrick Hajek, Neha Varghese, Supratim Mukherjee, T. B. K. Reddy, Chris Daum, Yuko Yoshinaga, Ronan C. O’Malley, R. Seshadri, Nikos C. Kyrpides, Emiley A. Eloe‐Fadrosh, I-Min A. Chen, Alex Copeland, Natalia Ivanova

    Vydáno 2021
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  17. 17
    The IMG/M data management and analysis system v.7: content updates and new features

    The IMG/M data management and analysis system v.7: content updates and new features Autor I-Min A. Chen, Ken Chu, Krishna Palaniappan, Anna Ratner, Jinghua Huang, Marcel Huntemann, Patrick Hajek, Stephan Ritter, Cody Webb, Dongying Wu, Neha Varghese, T. B. K. Reddy, Supratim Mukherjee, Galina Ovchinnikova, Matt Nolan, R. Seshadri, Simon Roux, Axel Visel, Tanja Woyke, Emiley A. Eloe‐Fadrosh, Nikos C. Kyrpides, Natalia Ivanova

    Vydáno 2022
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  18. 18
    Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae

    Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia ge... Autor Carmen Scheuner, Brian J. Tindall, Megan Lu, Matt Nolan, Alla Lapidus, Jan‐Fang Cheng, Lynne Goodwin, Sam Pitluck, Marcel Huntemann, Konstantinos Liolios, Ioanna Pagani, Konstantinos Mavromatis, Natalia Ivanova, Amrita Pati, Amy Chen, Krishna Palaniappan, Cynthia D. Jeffries, Loren Hauser, Miriam Land, Romano Mwirichia, Manfred Rohde, Birte Abt, John C. Detter, Tanja Woyke, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Markus Göker, Nikos C. Kyrpides, Hans-Peter Klenk

    Vydáno 2014
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  19. 19
    IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata

    IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata Autor Antônio Pedro Camargo, Lee Call, Simon Roux, Stephen Nayfach, Marcel Huntemann, Krishna Palaniappan, Anna Ratner, Ken Chu, Supratim Mukherjee, T. B. K. Reddy, I-Min A. Chen, Natalia Ivanova, Emiley A. Eloe‐Fadrosh, Tanja Woyke, David A. Baltrus, Salvador Castañeda-Barba, Fernando de la Cruz, Barbara E. Funnell, James P. J. Hall, Aindrila Mukhopadhyay, Eduardo P. C. Rocha, Thibault Stalder, Eva M. Top, Nikos C. Kyrpides

    Vydáno 2023
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  20. 20
    Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot

    Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot Autor Antônio Pedro Camargo, Rafael Soares Correa de Souza, Patrícia de Britto Costa, Isabel Rodrigues Gerhardt, Ricardo A. Dante, Grazielle Sales Teodoro, Anna Abrahão, Hans Lambers, Marcelo Falsarella Carazzolle, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Simon Roux, Krishna Palaniappan, Neha Varghese, Supratim Mukherjee, T. B. K. Reddy, Chris Daum, Alex Copeland, I.-Min A. Chen, Natalia Ivanova, Nikos C. Kyrpides, Christa Pennacchio, Emiley A. Eloe‐Fadrosh, Paulo Arruda, Rafael S. Oliveira

    Vydáno 2019
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