Search Results - Manimozhiyan Arumugam

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  1. 1
    SmashCommunity: a metagenomic annotation and analysis tool

    SmashCommunity: a metagenomic annotation and analysis tool by Manimozhiyan Arumugam, Eoghan Harrington, Konrad Foerstner, Jeroen Raes, Peer Bork

    Published 2010
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  2. 2
    Trust is good, control is better: technical considerations in blood microbiome analysis

    Trust is good, control is better: technical considerations in blood microbiome analysis by Robert Schierwagen, Maria Camila Alvarez Silva, Florence Servant, Jonel Trebicka, Benjamin Lelouvier, Manimozhiyan Arumugam

    Published 2019
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  3. 3
    Country-specific antibiotic use practices impact the human gut resistome

    Country-specific antibiotic use practices impact the human gut resistome by Sofia K. Forslund, Shinichi Sunagawa, Jens Roat Kultima, Daniel R. Mende, Manimozhiyan Arumugam, Athanasios Typas, Peer Bork

    Published 2013
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  4. 4
    Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data

    Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data by Daniel R. Mende, Alison S. Waller, Shinichi Sunagawa, Aino I. Järvelin, Michelle M. Chan, Manimozhiyan Arumugam, Jeroen Raes, Peer Bork

    Published 2012
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  5. 5
    Insight into Structure and Assembly of the Nuclear Pore Complex by Utilizing the Genome of a Eukaryotic Thermophile

    Insight into Structure and Assembly of the Nuclear Pore Complex by Utilizing the Genome of a Eukaryotic Thermophile by Stefan Amlacher, Phillip Sarges, Dirk Flemming, Vera van Noort, Ruth Kunze, Damien P. Devos, Manimozhiyan Arumugam, Peer Bork, Ed Hurt

    Published 2011
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  6. 6
    Consistent mutational paths predict eukaryotic thermostability

    Consistent mutational paths predict eukaryotic thermostability by Vera van Noort, Bettina Bradatsch, Manimozhiyan Arumugam, Stefan Amlacher, Gert Bange, Christopher J. Creevey, Sebastian Falk, Daniel R. Mende, Irmgard Sinning, Ed Hurt, Peer Bork

    Published 2013
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  7. 7
    Interplay between FGF21 and insulin action in the liver regulates metabolism

    Interplay between FGF21 and insulin action in the liver regulates metabolism by Brice Emanuelli, Sara G. Vienberg, Graham Smyth, Christine C. Cheng, Kristin I. Stanford, Manimozhiyan Arumugam, Mervyn D. Michael, Andrew C. Adams, Alexei Kharitonenkov, C. Ronald Kahn

    Published 2014
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  8. 8
    MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit

    MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit by Jens Roat Kultima, Shinichi Sunagawa, Junhua Li, Wei‐Neng Chen, Hua Chen, Daniel R. Mende, Manimozhiyan Arumugam, Qi Pan, Binghang Liu, Junjie Qin, Jun Wang, Peer Bork

    Published 2012
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  9. 9
    The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates

    The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates by Erwin G. Zoetendal, Jeroen Raes, Bartholomeus van den Bogert, Manimozhiyan Arumugam, Carien CGM Booijink, Freddy J. Troost, Peer Bork, Michiel Wels, Willem M. de Vos, Michiel Kleerebezem

    Published 2012
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  10. 10
    Molecular Properties of Adult Mouse Gastric and Intestinal Epithelial Progenitors in Their Niches

    Molecular Properties of Adult Mouse Gastric and Intestinal Epithelial Progenitors in Their Niches by Marios Giannakis, Thaddeus S. Stappenbeck, Jason C. Mills, Douglas G. Leip, Michael Lovett, Sandra W. Clifton, Joseph E. Ippolito, Jarret Glasscock, Manimozhiyan Arumugam, Michael R. Brent, Jeffrey I. Gordon

    Published 2006
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  11. 11
    Compartmentalization of Immune Response and Microbial Translocation in Decompensated Cirrhosis

    Compartmentalization of Immune Response and Microbial Translocation in Decompensated Cirrhosis by Maria Camila Alvarez Silva, Robert Schierwagen, Alessandra Pohlmann, Fernando Magdaleno, Frank Erhard Uschner, Patrick Ryan, Maria J. G. T. Vehreschild, J. J. Clariá, Eicke Latz, Benjamin Lelouvier, Manimozhiyan Arumugam, Jonel Trebicka

    Published 2019
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  12. 12
    Genomic variation landscape of the human gut microbiome

    Genomic variation landscape of the human gut microbiome by Siegfried Schloissnig, Manimozhiyan Arumugam, Shinichi Sunagawa, Makedonka Mitreva, Julien Tap, Ana Zhu, Alison S. Waller, Daniel R. Mende, Jens Roat Kultima, John Martin, Karthik Kota, Shamil Sunyaev, George M. Weinstock, Peer Bork

    Published 2012
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  13. 13
    Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways

    Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways by Michael Jakob Pichler, Chihaya Yamada, Bashar Shuoker, Maria Camila Alvarez Silva, Aina Gotoh, Maria Louise Leth, Erwin M. Schoof, Toshihiko Katoh, Mikiyasu Sakanaka, Takane Katayama, Chunsheng Jin, Niclas G. Karlsson, Manimozhiyan Arumugam, Shinya Fushinobu, Maher Abou Hachem

    Published 2020
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  14. 14
    Rifaximin-α for liver fibrosis in patients with alcohol-related liver disease (GALA-RIF): a randomised, double-blind, placebo-controlled, phase 2 trial

    Rifaximin-α for liver fibrosis in patients with alcohol-related liver disease (GALA-RIF): a randomised, double-blind, placebo-controlled, phase 2 trial by Mads Israelsen, Bjørn Stæhr Madsen, Nikolaj Torp, Stine Johansen, Camilla Dalby Hansen, Sönke Detlefsen, Peter Andersen, Johanne Kragh Hansen, Katrine Prier Lindvig, Ditlev Nytoft Rasmussen, Katrine Holtz Thorhauge, Maria Kjærgaard, M.A. Karsdal, Torben Hansen, Manimozhiyan Arumugam, Jonel Trebicka, Maja Thiele, Aleksander Krag, Ema Anastasiadou, Manimozhiyan Arumugam, Peer Bork, Torben Hansen, Roland Henrar, Hans Israelsen, M.A. Karsdal, Cristina Legido‐Quigley, Hans Olav Melberg, Maja Thiele, Jonel Trebicka, Aleksander Krag, Peer Bork, Mathias Mann, Jelle Matthijnssens, Aleksander Krag, Torben Hansen

    Published 2023
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  15. 15
    Circulating microbiome in blood of different circulatory compartments

    Circulating microbiome in blood of different circulatory compartments by Robert Schierwagen, Maria Camila Alvarez Silva, Mette Simone Aae Madsen, Carl Christian Kolbe, Carsten H. Meyer, Daniel Thomas, Frank Erhard Uschner, Fernando Magdaleno, Christian Jansen, Alessandra Pohlmann, Michael Praktiknjo, Gunnar Hischebeth, Ernst Molitor, Eicke Latz, Benjamin Lelouvier, Jonel Trebicka, Manimozhiyan Arumugam

    Published 2018
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  16. 16
    Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly

    Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly by Nicolai Karcher, Eleonora Nigro, Michal Punčochář, Aitor Blanco‐Míguez, Matteo Ciciani, Paolo Manghi, Moreno Zolfo, Fabio Cumbo, Serena Manara, Davide Golzato, Anna Cereseto, Manimozhiyan Arumugam, Thi Phuong Nam Bui, Hanne L. P. Tytgat, Mireia Vallés-Colomer, Willem M. de Vos, Nicola Segata

    Published 2021
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  17. 17
    Roux-en-Y gastric bypass surgery of morbidly obese patients induces swift and persistent changes of the individual gut microbiota

    Roux-en-Y gastric bypass surgery of morbidly obese patients induces swift and persistent changes of the individual gut microbiota by Albert Pallejá, Alireza Kashani, Kristine H. Allin, Trine Nielsen, Chenchen Zhang, Yin Li, Thorsten Brach, Suisha Liang, Qiang Feng, Nils B. Jørgensen, Kirstine N. Bojsen‐Møller, Carsten Dirksen, Kristoffer Sølvsten Burgdorf, Jens J. Holst, Sten Madsbad, Jun Wang, Oluf Pedersen, Torben Hansen, Manimozhiyan Arumugam

    Published 2016
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  18. 18
    Opportunities and barriers in omics-based biomarker discovery for steatotic liver diseases

    Opportunities and barriers in omics-based biomarker discovery for steatotic liver diseases by Maja Thiele, Ida Falk Villesen, Lili Niu, Stine Johansen, Karolina Sulek, Suguru Nishijima, Lore Van Espen, M. Keller, Mads Israelsen, Tommi Suvitaival, Andressa de Zawadzki, Helene Bæk Juel, Maximilian Joseph Brol, Sara Stinson, Yun Huang, Maria Camilla Alvarez Silva, Michael Kuhn, Ema Anastasiadou, Diana Julie Leeming, M.A. Karsdal, Jelle Matthijnssens, Manimozhiyan Arumugam, Louise T. Dalgaard, Cristina Legido‐Quigley, Matthias Mann, Jonel Trebicka, Peer Bork, Lars Juhl Jensen, Torben Hansen, Aleksander Krag, Torben Hansen, Matthias Mann, Jelle Matthijnssens, Aleksander Krag, Aleksander Krag, Peer Bork, Torben Hansen, Manimozhiyan Arumugam, Jonel Trebicka, M.A. Karsdal, Ema Anastasiadou, Hans Israelsen, Hans Olav Melberg, Cristina Legido‐Quigley, Maja Thiele

    Published 2024
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  19. 19
    Fecal microbial load is a major determinant of gut microbiome variation and a confounder for disease associations

    Fecal microbial load is a major determinant of gut microbiome variation and a confounder for disease associations by Suguru Nishijima, Evelina Stankevič, Oliver Aasmets, Thomas Schmidt, Naoyoshi Nagata, M. Keller, Pamela Ferretti, Helene Bæk Juel, Anthony Fullam, Shahriyar Mahdi Robbani, Christian Schudoma, Aleksander Krag, Louise Aas Holm, Mads Israelsen, Robert Schierwagen, Nikolaj Torp, Anja Telzerow, Rajna Hercog, Stefanie Kandels‐Lewis, Dienty Hendrina Maria Johanna Hazenbrink, Manimozhiyan Arumugam, Flemming Bendtsen, Charlotte Brøns, Cilius Esmann Fonvig, Jens‐Christian Holm, Trine Nielsen, Julie Steen Pedersen, Maja Thiele, Jonel Trebicka, Elin Org, Aleksander Krag, Torben Hansen, Michael Kuhn, Peer Bork, Torben Hansen, Matthias Mann, Jelle Matthijnssens, Aleksander Krag, Peer Bork, Manimozhiyan Arumugam, Jonel Trebicka, M.A. Karsdal, Ema Anastasiadou, Hans Israelsen, Hans Olav Melberg, Cristina Legido‐Quigley, Maja Thiele

    Published 2024
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  20. 20
    Gut microbiome development along the colorectal adenoma–carcinoma sequence

    Gut microbiome development along the colorectal adenoma–carcinoma sequence by Qiang Feng, Suisha Liang, Huijue Jia, Andreas Stadlmayr, Longqing Tang, Zhou Lan, Dongya Zhang, Huihua Xia, Xiaoying Xu, Zhuye Jie, Lili Su, Xiaoping Li, Xin Li, Junhua Li, Liang Xiao, Ursula Huber-Schönauer, David Niederseer, Xun Xu, Jumana Y. Al‐Aama, Huanming Yang, Jian Wang, Karsten Kristiansen, Manimozhiyan Arumugam, Herbert Tilg, Christian Datz, Jun Wang

    Published 2015
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