Výsledky vyhledávání - Mani, D R

Clustering with position-specific constraints on variance: Applying redescending M-estimators to label-free LC-MS data analysis Autor Frühwirth, Rudolf, Mani, D R, Pyne, Saumyadipta

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Statistical characterization of multiple-reaction monitoring mass spectrometry (MRM-MS) assays for quantitative proteomics Autor Mani, D R, Abbatiello, Susan E, Carr, Steven A

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Editorial: Proteomics and Its Applications in Cancer Autor Thakur, Suman S., Gowda, Harsha, Mani, D. R., Chatterjee, Bhaswati

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Automated Detection of Inaccurate and Imprecise Transitions in Peptide Quantification by Multiple Reaction Monitoring Mass Spectrometry Autor Abbatiello, Susan E., Mani, D. R., Keshishian, Hasmik, Carr, Steven A.

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Prediction of high-responding peptides for targeted protein assays by mass spectrometry Autor Fusaro, Vincent A, Mani, D R, Mesirov, Jill P, Carr, Steven A

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Transitioning from Targeted to Comprehensive Mass Spectrometry using Genetic Algorithms Autor Jaffe, Jacob D., Feeney, Caitlin M., Patel, Jinal, Lu, Xiaodong, Mani, D. R.

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Simplified and Efficient Quantification of Low-abundance Proteins at Very High Multiplex via Targeted Mass Spectrometry Autor Burgess, Michael W., Keshishian, Hasmik, Mani, D. R., Gillette, Michael A., Carr, Steven A.

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Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression Autor Naba, Alexandra, Clauser, Karl R., Mani, D. R., Carr, Steven A., Hynes, Richard O.

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PEPPeR: A Platform for Experimental Proteomic Pattern Recognition Autor Jaffe, Jacob D., Mani, D. R., Leptos, Kyriacos C., Church, George M., Gillette, Michael A., Carr, Steven A.

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Refined Preparation and Use of Anti-diglycine Remnant (K-ε-GG) Antibody Enables Routine Quantification of 10,000s of Ubiquitination Sites in Single Proteomics Experiments Autor Udeshi, Namrata D., Svinkina, Tanya, Mertins, Philipp, Kuhn, Eric, Mani, D. R., Qiao, Jana W., Carr, Steven A.

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Quantification of Cardiovascular Biomarkers in Patient Plasma by Targeted Mass Spectrometry and Stable Isotope Dilution Autor Keshishian, Hasmik, Addona, Terri, Burgess, Michael, Mani, D. R., Shi, Xu, Kuhn, Eric, Sabatine, Marc S., Gerszten, Robert E., Carr, Steven A.

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Developing Multiplexed Assays for Troponin I and Interleukin-33 in Plasma by Peptide Immunoaffinity Enrichment and Targeted Mass Spectrometry Autor Kuhn, Eric, Addona, Terri, Keshishian, Hasmik, Burgess, Michael, Mani, D.R., Lee, Richard T., Sabatine, Marc S., Gerszten, Robert E., Carr, Steven A.

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Methods for Quantification of in vivo Changes in Protein Ubiquitination following Proteasome and Deubiquitinase Inhibition Autor Udeshi, Namrata D., Mani, D. R., Eisenhaure, Thomas, Mertins, Philipp, Jaffe, Jacob D., Clauser, Karl R., Hacohen, Nir, Carr, Steven A.

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Methods, Tools and Current Perspectives in Proteogenomics Autor Ruggles, Kelly V., Krug, Karsten, Wang, Xiaojing, Clauser, Karl R., Wang, Jing, Payne, Samuel H., Fenyö, David, Zhang, Bing, Mani, D. R.

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PANOPLY: A cloud-based platform for automated and reproducible proteogenomic data analysis Autor Mani, D. R., Maynard, Myranda, Kothadia, Ramani, Krug, Karsten, Christianson, Karen E., Heiman, David, Clauser, Karl R., Birger, Chet, Getz, Gad, Carr, Steven A.

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Proteomic analyses of ECM during pancreatic ductal adenocarcinoma progression reveal different contributions by tumor and stromal cells Autor Tian, Chenxi, Clauser, Karl R., Öhlund, Daniel, Rickelt, Steffen, Huang, Ying, Gupta, Mala, Mani, D. R., Carr, Steven A., Tuveson, David A., Hynes, Richard O.

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Integrated proteomic analysis of post-translational modifications by serial enrichment Autor Mertins, Philipp, Qiao, Jana W, Patel, Jinal, Udeshi, Namrata D, Clauser, Karl R, Mani, D R, Burgess, Michael W, Gillette, Michael A, Jaffe, Jacob D, Carr, Steven A

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Multiplexed, Quantitative Workflow for Sensitive Biomarker Discovery in Plasma Yields Novel Candidates for Early Myocardial Injury Autor Keshishian, Hasmik, Burgess, Michael W., Gillette, Michael A., Mertins, Philipp, Clauser, Karl R., Mani, D. R., Kuhn, Eric W., Farrell, Laurie A., Gerszten, Robert E., Carr, Steven A.

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Identification of apolipoprotein D as a cardioprotective gene using a mouse model of lethal atherosclerotic coronary artery disease Autor Tsukamoto, Kosuke, Mani, D. R., Shi, Jianru, Zhang, Songwen, Haagensen, Darrow E., Otsuka, Fumiyuki, Guan, Jian, Smith, Jonathan D., Weng, Wei, Liao, Ronglih, Kolodgie, Frank D., Virmani, Renu, Krieger, Monty

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Streamlined Protocol for Deep Proteomic Profiling of FAC-sorted Cells and Its Application to Freshly Isolated Murine Immune Cells Autor Myers, Samuel A., Rhoads, Andrew, Cocco, Alexandra R., Peckner, Ryan, Haber, Adam L., Schweitzer, Lawrence D., Krug, Karsten, Mani, D. R., Clauser, Karl R., Rozenblatt-Rosen, Orit, Hacohen, Nir, Regev, Aviv, Carr, Steven A.

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