Search Results - MacLean, Brendan

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  1. 1
    Comparison of Database Search Strategies for High Precursor Mass Accuracy MS/MS Data

    Comparison of Database Search Strategies for High Precursor Mass Accuracy MS/MS Data by Hsieh, Edward J., Hoopmann, Michael R., MacLean, Brendan, MacCoss, Michael J.

    Published 2010
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  2. 2
    Multiplexed Peptide Analysis using Data Independent Acquisition and Skyline

    Multiplexed Peptide Analysis using Data Independent Acquisition and Skyline by Egertson, Jarrett D., MacLean, Brendan, Johnson, Richard, Xuan, Yue, MacCoss, Michael J.

    Published 2015
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  3. 3
    Standardization of PGC-LC-MS-based glycomics for sample specific glycotyping

    Standardization of PGC-LC-MS-based glycomics for sample specific glycotyping by Ashwood, Christopher, Pratt, Brian, MacLean, Brendan X., Gundry, Rebekah L., Packer, Nicolle H.

    Published 2019
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  4. 4
    Rapid empirical discovery of optimal peptides for targeted proteomics

    Rapid empirical discovery of optimal peptides for targeted proteomics by Stergachis, Andrew B., MacLean, Brendan, Lee, Kristen, Stamatoyannopoulos, John A., MacCoss, Michael J.

    Published 2011
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  5. 5
    The Development of Selected Reaction Monitoring Methods for Targeted Proteomics via Empirical Refinement

    The Development of Selected Reaction Monitoring Methods for Targeted Proteomics via Empirical Refinement by Bereman, Michael S., MacLean, Brendan, Tomazela, Daniela M., Liebler, Daniel C., MacCoss, Michael J.

    Published 2012
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  6. 6
    Skyline Performs as well as Vendor Software in the Quantitative Analysis of Serum 25-Hydroxy Vitamin D and Vitamin D Binding Globulin

    Skyline Performs as well as Vendor Software in the Quantitative Analysis of Serum 25-Hydroxy Vitamin D and Vitamin D Binding Globulin by Henderson, Clark M., Shulman, Nicholas J., MacLean, Brendan, MacCoss, Michael J., Hoofnagle, Andrew N.

    Published 2017
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  7. 7
    An Automated Pipeline to Monitor System Performance in Liquid Chromatography Tandem Mass Spectrometry Proteomic Experiments

    An Automated Pipeline to Monitor System Performance in Liquid Chromatography Tandem Mass Spectrometry Proteomic Experiments by Bereman, Michael S., Beri, Joshua, Sharma, Vagisha, Nathe, Cory, Eckels, Josh, MacLean, Brendan, MacCoss, Michael J.

    Published 2016
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  8. 8
    MSstatsQC: Longitudinal System Suitability Monitoring and Quality Control for Targeted Proteomic Experiments

    MSstatsQC: Longitudinal System Suitability Monitoring and Quality Control for Targeted Proteomic Experiments by Dogu, Eralp, Mohammad-Taheri, Sara, Abbatiello, Susan E., Bereman, Michael S., MacLean, Brendan, Schilling, Birgit, Vitek, Olga

    Published 2017
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  9. 9
    Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments

    Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments by Tsai, Tsung-Heng, Choi, Meena, Banfai, Balazs, Liu, Yansheng, MacLean, Brendan X., Dunkley, Tom, Vitek, Olga

    Published 2020
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  10. 10
    Expediting the Development of Targeted SRM Assays: Using Data from Shotgun Proteomics to Automate Method Development

    Expediting the Development of Targeted SRM Assays: Using Data from Shotgun Proteomics to Automate Method Development by Prakash, Amol, Tomazela, Daniela M., Frewen, Barbara, MacLean, Brendan, Merrihew, Gennifer, Peterman, Scott, MacCoss, Michael J.

    Published 2009
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  11. 11
    The Skyline Ecosystem: Informatics for Quantitative Mass Spectrometry Proteomics

    The Skyline Ecosystem: Informatics for Quantitative Mass Spectrometry Proteomics by Pino, Lindsay K., Searle, Brian C., Bollinger, James G., Nunn, Brook, MacLean, Brendan, MacCoss, Michael J.

    Published 2017
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  12. 12
    Panorama Public: A Public Repository for Quantitative Data Sets Processed in Skyline

    Panorama Public: A Public Repository for Quantitative Data Sets Processed in Skyline by Sharma, Vagisha, Eckels, Josh, Schilling, Birgit, Ludwig, Christina, Jaffe, Jacob D., MacCoss, Michael J., MacLean, Brendan

    Published 2018
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  13. 13
    Using Skyline to Analyze Data Containing Liquid Chromatography, Ion Mobility Spectrometry and Mass Spectrometry Dimensions

    Using Skyline to Analyze Data Containing Liquid Chromatography, Ion Mobility Spectrometry and Mass Spectrometry Dimensions by MacLean, Brendan X., Pratt, Brian S., Egertson, Jarrett D., MacCoss, Michael J., Smith, Richard D., Baker, Erin S.

    Published 2018
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  14. 14
    Skyline Batch: An Intuitive User Interface for Batch Processing with Skyline

    Skyline Batch: An Intuitive User Interface for Batch Processing with Skyline by Marsh, Alexandra N., Sharma, Vagisha, Mani, Surya K., Vitek, Olga, MacCoss, Michael J., MacLean, Brendan X.

    Published 2021
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  15. 15
    Using iRT, a normalized retention time for more targeted measurement of peptides

    Using iRT, a normalized retention time for more targeted measurement of peptides by Escher, Claudia, Reiter, Lukas, MacLean, Brendan, Ossola, Reto, Herzog, Franz, Chilton, John, MacCoss, Michael J., Rinner, Oliver

    Published 2012
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  16. 16
    Implementation of Statistical Process Control for Proteomic Experiments via LC MS/MS

    Implementation of Statistical Process Control for Proteomic Experiments via LC MS/MS by Bereman, Michael S., Johnson, Richard, Bollinger, James, Boss, Yuval, Shulman, Nick, MacLean, Brendan, Hoofnagle, Andrew N., MacCoss, Michael J.

    Published 2014
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  17. 17
    Audit logs to enforce document integrity in Skyline and Panorama

    Audit logs to enforce document integrity in Skyline and Panorama by Rohde, Tobias, Chupalov, Rita, Shulman, Nicholas, Sharma, Vagisha, Eckels, Josh, Pratt, Brian S, MacCoss, Michael J, MacLean, Brendan X

    Published 2020
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  18. 18
    Accounting for population variation in targeted proteomics

    Accounting for population variation in targeted proteomics by Fujimoto, Grant M, Monroe, Matthew E, Rodriguez, Larissa, Wu, Chaochao, MacLean, Brendan, Smith, Richard D, MacCoss, Michael J, Payne, Samuel H

    Published 2013
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  19. 19
    Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry

    Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry by Searle, Brian C., Pino, Lindsay K., Egertson, Jarrett D., Ting, Ying S., Lawrence, Robert T., MacLean, Brendan X., Villén, Judit, MacCoss, Michael J.

    Published 2018
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  20. 20
    Effect of Collision Energy Optimization on the Measurement of Peptides by Selected Reaction Monitoring (SRM) Mass Spectrometry

    Effect of Collision Energy Optimization on the Measurement of Peptides by Selected Reaction Monitoring (SRM) Mass Spectrometry by MacLean, Brendan, Tomazela, Daniela M., Abbatiello, Susan E., Zhang, Shucha, Whiteaker, Jeffrey R., Paulovich, Amanda G., Carr, Steven A., MacCoss, Michael J.

    Published 2010
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