Search Results - Lovelace J. Luquette

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  1. 1
    Detecting Somatic Mutations in Normal Cells

    Detecting Somatic Mutations in Normal Cells by Yanmei Dou, Heather Gold, Lovelace J. Luquette, Peter J. Park

    Published 2018
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  2. 2
    Estimating enrichment of repetitive elements from high-throughput sequence data

    Estimating enrichment of repetitive elements from high-throughput sequence data by Daniel S. Day, Lovelace J. Luquette, Peter J. Park, Peter V. Kharchenko

    Published 2010
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  3. 3
    rSW-seq: Algorithm for detection of copy number alterations in deep sequencing data

    rSW-seq: Algorithm for detection of copy number alterations in deep sequencing data by Tae‐Min Kim, Lovelace J. Luquette, Ruibin Xi, Peter J. Park

    Published 2010
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  4. 4
    Identification of somatic mutations in single cell DNA-seq using a spatial model of allelic imbalance

    Identification of somatic mutations in single cell DNA-seq using a spatial model of allelic imbalance by Lovelace J. Luquette, Craig L. Bohrson, Max A. Sherman, Peter J. Park

    Published 2019
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  5. 5
    Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes

    Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes by Tae‐Min Kim, Ruibin Xi, Lovelace J. Luquette, Richard W. Park, Mark D. Johnson, Peter J. Park

    Published 2012
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  6. 6
    Systematic identification of synergistic drug pairs targeting HIV

    Systematic identification of synergistic drug pairs targeting HIV by Xu Tan, Long Hu, Lovelace J. Luquette, Geng Gao, Yifang Liu, Hongjing Qu, Ruibin Xi, Zhi John Lu, Peter J. Park, Stephen J. Elledge

    Published 2012
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  7. 7
    Accurate detection of mosaic variants in sequencing data without matched controls

    Accurate detection of mosaic variants in sequencing data without matched controls by Yanmei Dou, Minseok Kwon, Rachel E. Rodin, Isidro Cortés‐Ciriano, Ryan N. Doan, Lovelace J. Luquette, Alon Galor, Craig L. Bohrson, Christopher A. Walsh, Peter J. Park

    Published 2020
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  8. 8
    Diverse Mechanisms of Somatic Structural Variations in Human Cancer Genomes

    Diverse Mechanisms of Somatic Structural Variations in Human Cancer Genomes by Lixing Yang, Lovelace J. Luquette, Nils Gehlenborg, Ruibin Xi, Psalm Haseley, Chih-Heng Hsieh, Chengsheng Zhang, Xiaojia Ren, Alexei Protopopov, Lynda Chin, Raju Kucherlapati, Charles Lee, Peter J. Park

    Published 2013
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  9. 9
    Impact of sequencing depth in ChIP-seq experiments

    Impact of sequencing depth in ChIP-seq experiments by Youngsook L. Jung, Lovelace J. Luquette, Joshua W. K. Ho, Francesco Ferrari, Michael Tolstorukov, Aki Minoda, Robbyn Issner, Charles B. Epstein, Gary H. Karpen, Mitzi I. Kuroda, Peter J. Park

    Published 2014
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  10. 10
    Copy number variation detection in whole-genome sequencing data using the Bayesian information criterion

    Copy number variation detection in whole-genome sequencing data using the Bayesian information criterion by Ruibin Xi, Angela Hadjipanayis, Lovelace J. Luquette, Tae‐Min Kim, Eunjung Lee, Jianhua Zhang, Mark D. Johnson, Donna M. Muzny, David A. Wheeler, Richard A. Gibbs, Raju Kucherlapati, Peter J. Park

    Published 2011
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  11. 11
    Mutation of KCNJ8 in a patient with Cantú syndrome with unique vascular abnormalities – Support for the role of K(ATP) channels in this condition

    Mutation of KCNJ8 in a patient with Cantú syndrome with unique vascular abnormalities – Support for the role of K(ATP) channels in this condition by Catherine A. Brownstein, Meghan C. Towne, Lovelace J. Luquette, D. James Harris, Nicholas S. Marinakis, Peter Meinecke, Kerstin Kutsche, Philippe M. Campeau, Timothy W. Yu, David Margulies, Pankaj B. Agrawal, Alan H. Beggs

    Published 2013
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  12. 12
    Somatic mutation in single human neurons tracks developmental and transcriptional history

    Somatic mutation in single human neurons tracks developmental and transcriptional history by Michael A. Lodato, Mollie B. Woodworth, Semin Lee, Gilad D. Evrony, Bhaven K. Mehta, Amir Karger, Soohyun Lee, Thomas W. Chittenden, Alissa M. D’Gama, Xuyu Cai, Lovelace J. Luquette, Eunjung Lee, Peter J. Park, Christopher A. Walsh

    Published 2015
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  13. 13
    Linked-read analysis identifies mutations in single-cell DNA-sequencing data

    Linked-read analysis identifies mutations in single-cell DNA-sequencing data by Craig L. Bohrson, Alison R. Barton, Michael A. Lodato, Rachel E. Rodin, Lovelace J. Luquette, Vinay Viswanadham, D. Gulhan, Isidro Cortés‐Ciriano, Maxwell A. Sherman, Min‐Seok Kwon, Michael E. Coulter, Alon Galor, Christopher A. Walsh, Peter J. Park

    Published 2019
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  14. 14
    Contrasting somatic mutation patterns in aging human neurons and oligodendrocytes

    Contrasting somatic mutation patterns in aging human neurons and oligodendrocytes by Javier Ganz, Lovelace J. Luquette, Sara Bizzotto, Michael B. Miller, Zinan Zhou, Craig L. Bohrson, Hu Jin, Antuan V. Tran, Vinay Viswanadham, Gannon A. McDonough, Katherine Brown, Yasmine Chahine, Brian Chhouk, Alon Galor, Peter J. Park, Christopher A. Walsh

    Published 2024
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  15. 15
    Recurrent patterns of widespread neuronal genomic damage shared by major neurodegenerative disorders

    Recurrent patterns of widespread neuronal genomic damage shared by major neurodegenerative disorders by Zinan Zhou, Lovelace J. Luquette, Guanlan Dong, Junho Kim, Jayoung Ku, K M Kim, Mingyun Bae, Diane D. Shao, Bezawit Sahile, Michael B. Miller, August Yue Huang, William J. Nathan, André Nussenzweig, Peter J. Park, Clotilde Lagier‐Tourenne, Eunjung Alice Lee, Christopher A. Walsh

    Published 2025
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  16. 16
    Aging and neurodegeneration are associated with increased mutations in single human neurons

    Aging and neurodegeneration are associated with increased mutations in single human neurons by Michael A. Lodato, Rachel E. Rodin, Craig L. Bohrson, Michael E. Coulter, Alison R. Barton, Min‐Seok Kwon, Maxwell A. Sherman, Carl Vitzthum, Lovelace J. Luquette, Chandri Yandava, Pengwei Yang, Thomas W. Chittenden, Nicole E. Hatem, Steven C. Ryu, Mollie B. Woodworth, Peter J. Park, Christopher A. Walsh

    Published 2017
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  17. 17
    Single-cell genome sequencing of human neurons identifies somatic point mutation and indel enrichment in regulatory elements

    Single-cell genome sequencing of human neurons identifies somatic point mutation and indel enrichment in regulatory elements by Lovelace J. Luquette, Michael B. Miller, Zinan Zhou, Craig L. Bohrson, Yifan Zhao, Hu Jin, D. Gulhan, Javier Ganz, Sara Bizzotto, Samantha L. Kirkham, Tino Hochepied, Claude Libert, Alon Galor, Junho Kim, Michael A. Lodato, Juan I. Garaycoechea, Charles Gawad, Jay West, Christopher A. Walsh, Peter J. Park

    Published 2022
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  18. 18
    Global impact of somatic structural variation on the DNA methylome of human cancers

    Global impact of somatic structural variation on the DNA methylome of human cancers by Yiqun Zhang, Lixing Yang, Melanie H. Kucherlapati, Angela Hadjipanayis, Angeliki Pantazi, Christopher A. Bristow, Eunjung Alice Lee, Harshad S. Mahadeshwar, Jiabin Tang, Jianhua Zhang, Sahil Seth, Semin Lee, Xiaojia Ren, Xingzhi Song, Huandong Sun, Jonathan G. Seidman, Lovelace J. Luquette, Ruibin Xi, Lynda Chin, Alexei Protopopov, Peter J. Park, Raju Kucherlapati, Chad J. Creighton

    Published 2019
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  19. 19
    A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases

    A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases by Yiqun Zhang, Lixing Yang, Melanie H. Kucherlapati, Fengju Chen, Angela Hadjipanayis, Angeliki Pantazi, Christopher A. Bristow, Eunjung A. Lee, Harshad S. Mahadeshwar, Jiabin Tang, Jianhua Zhang, Sahil Seth, Semin Lee, Xiaojia Ren, Xingzhi Song, Huandong Sun, Jonathan G. Seidman, Lovelace J. Luquette, Ruibin Xi, Lynda Chin, Alexei Protopopov, Wei Li, Peter J. Park, Raju Kucherlapati, Chad J. Creighton

    Published 2018
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  20. 20
    Somatic genomic changes in single Alzheimer’s disease neurons

    Somatic genomic changes in single Alzheimer’s disease neurons by Michael B. Miller, August Yue Huang, Jun‐Ho Kim, Zinan Zhou, Samantha L. Kirkham, Eduardo A. Maury, Jennifer S. Ziegenfuss, Hannah C. Reed, Jennifer E. Neil, Lariza M. Rento, Steven C. Ryu, C. Chanthia, Lovelace J. Luquette, Heather M. Ames, Derek H. Oakley, Matthew P. Frosch, Bradley T. Hyman, Michael A. Lodato, Eunjung Alice Lee, Christopher A. Walsh

    Published 2022
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