Search Results - Liu, X. Shirley

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  1. 1
    Getting Started in Tiling Microarray Analysis

    Getting Started in Tiling Microarray Analysis by Liu, X. Shirley

    Published 2007
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  2. 2
    Analyzing ’omics data using hierarchical models

    Analyzing ’omics data using hierarchical models by Ji, Hongkai, Liu, X Shirley

    Published 2010
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  3. 3
    Systematic Curation of miRBase Annotation Using Integrated Small RNA High-Throughput Sequencing Data for C. elegans and Drosophila

    Systematic Curation of miRBase Annotation Using Integrated Small RNA High-Throughput Sequencing Data for C. elegans and Drosophila by Wang, Xiangfeng, Liu, X. Shirley

    Published 2011
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  4. 4
    ChIP-Chip: Algorithms for Calling Binding Sites

    ChIP-Chip: Algorithms for Calling Binding Sites by Liu, X. Shirley, Meyer, Clifford A.

    Published 2009
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  5. 5
    Identifying and Mitigating Bias in Next-Generation Sequencing Methods for Chromatin Biology

    Identifying and Mitigating Bias in Next-Generation Sequencing Methods for Chromatin Biology by Meyer, Clifford A., Liu, X. Shirley

    Published 2014
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  6. 6
    Applications of Immunogenomics to Cancer

    Applications of Immunogenomics to Cancer by Liu, X. Shirley, Mardis, Elaine R.

    Published 2017
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  7. 7
    Revisit linear regression-based deconvolution methods for tumor gene expression data

    Revisit linear regression-based deconvolution methods for tumor gene expression data by Li, Bo, Liu, Jun S., Liu, X. Shirley

    Published 2017
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  8. 8
    A Bayesian model for single cell transcript expression analysis on MERFISH data

    A Bayesian model for single cell transcript expression analysis on MERFISH data by Köster, Johannes, Brown, Myles, Liu, X Shirley

    Published 2019
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  9. 9
    A Bayesian model for single cell transcript expression analysis on MERFISH data

    A Bayesian model for single cell transcript expression analysis on MERFISH data by Köster, Johannes, Brown, Myles, Liu, X Shirley

    Published 2019
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  10. 10
    Minireview: Applications of Next-Generation Sequencing on Studies of Nuclear Receptor Regulation and Function

    Minireview: Applications of Next-Generation Sequencing on Studies of Nuclear Receptor Regulation and Function by Meyer, Clifford A., Tang, Qianzi, Liu, X. Shirley

    Published 2012
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  11. 11
    Big Data Approaches for Modeling Response and Resistance to Cancer Drugs

    Big Data Approaches for Modeling Response and Resistance to Cancer Drugs by Jiang, Peng, Sellers, William R., Liu, X. Shirley

    Published 2018
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  12. 12
    xMAN: extreme MApping of OligoNucleotides

    xMAN: extreme MApping of OligoNucleotides by Li, Wei, Carroll, Jason S, Brown, Myles, Liu, X Shirley

    Published 2008
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  13. 13
    A high-resolution map of nucleosome positioning on a fission yeast centromere

    A high-resolution map of nucleosome positioning on a fission yeast centromere by Song, Jun S., Liu, Xingkun, Liu, X. Shirley, He, Xiangwei

    Published 2008
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  14. 14
    Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species

    Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species by Zhang, Yong, Liu, X. Shirley, Liu, Qing-Rong, Wei, Liping

    Published 2006
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  15. 15
    Active enhancers are delineated de novo during hematopoiesis, with limited lineage fidelity among specified primary blood cells

    Active enhancers are delineated de novo during hematopoiesis, with limited lineage fidelity among specified primary blood cells by Luyten, Annouck, Zang, Chongzhi, Liu, X. Shirley, Shivdasani, Ramesh A.

    Published 2014
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  16. 16
    The Role of Notch Receptors in Transcriptional Regulation

    The Role of Notch Receptors in Transcriptional Regulation by WANG, HONGFANG, ZANG, CHONGZHI, LIU, X. SHIRLEY, ASTER, JON C.

    Published 2015
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  17. 17
    Integrating regulatory motif discovery and genome-wide expression analysis

    Integrating regulatory motif discovery and genome-wide expression analysis by Conlon, Erin M., Liu, X. Shirley, Lieb, Jason D., Liu, Jun S.

    Published 2003
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  18. 18
    CEAS: cis-regulatory element annotation system

    CEAS: cis-regulatory element annotation system by Ji, Xuwo, Li, Wei, Song, Jun, Wei, Liping, Liu, X. Shirley

    Published 2006
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  19. 19
    Identifying Positioned Nucleosomes with Epigenetic Marks in Human from ChIP-Seq

    Identifying Positioned Nucleosomes with Epigenetic Marks in Human from ChIP-Seq by Zhang, Yong, Shin, Hyunjin, Song, Jun S, Lei, Ying, Liu, X Shirley

    Published 2008
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  20. 20
    BINOCh: binding inference from nucleosome occupancy changes

    BINOCh: binding inference from nucleosome occupancy changes by Meyer, Clifford A., He, Housheng H., Brown, Myles, Liu, X. Shirley

    Published 2011
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