Search Results - Lennon, Niall J.

Technological considerations for genome-guided diagnosis and management of cancer by Lennon, Niall J., Adalsteinsson, Viktor A., Gabriel, Stacey B.

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PriSM: a primer selection and matching tool for amplification and sequencing of viral genomes by Yu, Qing, Ryan, Elizabeth M., Allen, Todd M., Birren, Bruce W., Henn, Matthew R., Lennon, Niall J.

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Accurate Estimation of Fungal Diversity and Abundance through Improved Lineage-Specific Primers Optimized for Illumina Amplicon Sequencing by Taylor, D. Lee, Walters, William A., Lennon, Niall J., Bochicchio, James, Krohn, Andrew, Caporaso, J. Gregory, Pennanen, Taina

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Characterizing and measuring bias in sequence data by Ross, Michael G, Russ, Carsten, Costello, Maura, Hollinger, Andrew, Lennon, Niall J, Hegarty, Ryan, Nusbaum, Chad, Jaffe, David B

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LB-11. Comparison of Viral Loads in Individuals With or Without Symptoms At Time of COVID-19 Testing Among 32,480 Residents and Staff of Nursing Homes and Assisted Living Facilitie... by Lennon, Niall J, Mina, Michael, Rehm, Heidi L, Hung, Deborah T, Smole, Sandra, Woolley, Ann E, Lander, Eric, Gabriel, Stacey

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Estimating epidemiologic dynamics from cross-sectional viral load distributions by Hay, James A., Kennedy-Shaffer, Lee, Kanjilal, Sanjat, Lennon, Niall J., Gabriel, Stacey B., Lipsitch, Marc, Mina, Michael J.

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Estimating epidemiologic dynamics from cross-sectional viral load distributions by Hay, James A., Kennedy-Shaffer, Lee, Kanjilal, Sanjat, Lennon, Niall J., Gabriel, Stacey B., Lipsitch, Marc, Mina, Michael J.

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Endurance, Refuge, and Reemergence of Dengue Virus Type 2, Puerto Rico, 1986–2007 by McElroy, Kate L., Santiago, Gilberto A., Lennon, Niall J., Birren, Bruce W., Henn, Matthew R., Muñoz-Jordán, Jorge L.

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Reemergence and Decline of Dengue Virus Serotype 3 in Puerto Rico by Santiago, Gilberto A., McElroy-Horne, Kate, Lennon, Niall J., Santiago, Luis M., Birren, Bruce W., Henn, Matthew R., Muñoz-Jordán, Jorge L.

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Pseudo-temporal ordering of individual cells reveals dynamics and regulators of cell fate decisions by Trapnell, Cole, Cacchiarelli, Davide, Grimsby, Jonna, Pokharel, Prapti, Li, Shuqiang, Morse, Michael, Lennon, Niall J., Livak, Kenneth J., Mikkelsen, Tarjei S., Rinn, John L.

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Cross-sectional assessment of SARS-CoV-2 viral load by symptom status in Massachusetts congregate living facilities by Lennon, Niall J, Bhattacharyya, Roby P, Mina, Michael J, Rehm, Heidi L, Hung, Deborah T, Smole, Sandra, Woolley, Ann, Lander, Eric S, Gabriel, Stacey B

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Internally deleted WNV genomes isolated from exotic birds in New Mexico: Function in cells, mosquitoes, and mice by PESKO, KENDRA N., FITZPATRICK, KELLY, RYAN, ELIZABETH M., SHI, PEI-YONG, ZHANG, BO, LENNON, NIALL J., NEWMAN, RUCHI M., HENN, MATTHEW R., EBEL, GREGORY D.

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De novo assembly of highly diverse viral populations by Yang, Xiao, Charlebois, Patrick, Gnerre, Sante, Coole, Matthew G, Lennon, Niall J, Levin, Joshua Z, Qu, James, Ryan, Elizabeth M, Zody, Michael C, Henn, Matthew R

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Genome-Wide Patterns of Intrahuman Dengue Virus Diversity Reveal Associations with Viral Phylogenetic Clade and Interhost Diversity by Parameswaran, Poornima, Charlebois, Patrick, Tellez, Yolanda, Nunez, Andrea, Ryan, Elizabeth M., Malboeuf, Christine M., Levin, Joshua Z., Lennon, Niall J., Balmaseda, Angel, Harris, Eva, Henn, Matthew R.

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Implementation of SARS-CoV2 Screening in K–12 Schools Using In-School Pooled Molecular Testing and Deconvolution by Rapid Antigen Test by Pollock, Nira R., Berlin, David, Smole, Sandra C., Madoff, Lawrence C., Brown, Catherine, Henderson, Kelsey, Larsen, Elizabeth, Hay, Jeremiah, Gabriel, Stacey, Gawande, Atul A., Lennon, Niall J.

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Next-generation sequencing for HLA typing of class I loci by Erlich, Rachel L, Jia, Xiaoming, Anderson, Scott, Banks, Eric, Gao, Xiaojiang, Carrington, Mary, Gupta, Namrata, DePristo, Mark A, Henn, Matthew R, Lennon, Niall J, de Bakker, Paul IW

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Endemic Dengue Associated with the Co-Circulation of Multiple Viral Lineages and Localized Density-Dependent Transmission by Raghwani, Jayna, Rambaut, Andrew, Holmes, Edward C., Hang, Vu Ty, Hien, Tran Tinh, Farrar, Jeremy, Wills, Bridget, Lennon, Niall J., Birren, Bruce W., Henn, Matthew R., Simmons, Cameron P.

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MOLECULAR EVOLUTION OF WEST NILE VIRUS IN A NORTHERN TEMPERATE REGION: CONNECTICUT, USA 1999–2008 by Armstrong, Philip M., Vossbrinck, Charles R., Andreadis, Theodore G., Anderson, John F., Pesko, Kendra N., Newman, Ruchi M., Lennon, Niall J., Birren, Bruce W., Ebel, Gregory D., Henn, Mathew R.

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Dynamics of Dengue Disease Severity Determined by the Interplay Between Viral Genetics and Serotype-Specific Immunity by OhAinle, Molly, Balmaseda, Angel, Macalalad, Alexander R., Tellez, Yolanda, Zody, Michael C., Saborío, Saira, Nuñez, Andrea, Lennon, Niall J., Birren, Bruce W., Gordon, Aubree, Henn, Matthew R., Harris, Eva

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Whole Genome Pyrosequencing of Rare Hepatitis C Virus Genotypes Enhances Subtype Classification and Identification of Naturally Occurring Drug Resistance Variants by Newman, Ruchi M., Kuntzen, Thomas, Weiner, Brian, Berical, Andrew, Charlebois, Patrick, Kuiken, Carla, Murphy, Donald G., Simmonds, Peter, Bennett, Phil, Lennon, Niall J., Birren, Bruce W., Zody, Michael C., Allen, Todd M., Henn, Matthew R.

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