Resultats de la cerca - Lauren Coombe

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  1. 1
    ntSynt-viz: Visualizing synteny patterns across multiple genomes

    ntSynt-viz: Visualizing synteny patterns across multiple genomes per Lauren Coombe, René L. Warren, İnanç Birol

    Publicat 2025
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  2. 2
    ARCS: scaffolding genome drafts with linked reads

    ARCS: scaffolding genome drafts with linked reads per Sarah Yeo, Lauren Coombe, René L. Warren, Justin Chu, İnanç Birol

    Publicat 2017
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  3. 3
    ntLink: A Toolkit for <i>De Novo</i> Genome Assembly Scaffolding and Mapping Using Long Reads

    ntLink: A Toolkit for <i>De Novo</i> Genome Assembly Scaffolding and Mapping Using Long Reads per Lauren Coombe, René L. Warren, Johnathan Wong, Vladimir Nikolić, İnanç Birol

    Publicat 2023
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  4. 4
    LongStitch: high-quality genome assembly correction and scaffolding using long reads

    LongStitch: high-quality genome assembly correction and scaffolding using long reads per Lauren Coombe, Janet X. Li, Theodora Lo, Johnathan Wong, Vladimir Nikolić, René L. Warren, İnanç Birol

    Publicat 2021
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  5. 5
    ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers

    ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers per Lauren Coombe, Jessica Zhang, Benjamin P. Vandervalk, Justin Chu, Shaun D. Jackman, İnanç Birol, René L. Warren

    Publicat 2018
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  6. 6
    Linear time complexity de novo long read genome assembly with GoldRush

    Linear time complexity de novo long read genome assembly with GoldRush per Johnathan Wong, Lauren Coombe, Vladimir Nikolić, Emily Zhang, Ka Ming Nip, Puneet Sidhu, René L. Warren, İnanç Birol

    Publicat 2023
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  7. 7
    ntEdit: scalable genome sequence polishing

    ntEdit: scalable genome sequence polishing per René L. Warren, Lauren Coombe, Hamid Mohamadi, Jessica Zhang, Barry Jaquish, Nathalie Isabel, Steven J.M. Jones, Jean Bousquet, Jöerg Bohlmann, İnanç Birol

    Publicat 2019
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  8. 8
    ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter

    ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter per Shaun D. Jackman, Benjamin P. Vandervalk, Hamid Mohamadi, Justin Chu, Sarah Yeo, S. Austin Hammond, Golnaz Jahesh, Hamza Khan, Lauren Coombe, René L. Warren, İnanç Birol

    Publicat 2017
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  9. 9
    Tigmint: correcting assembly errors using linked reads from large molecules

    Tigmint: correcting assembly errors using linked reads from large molecules per Shaun D. Jackman, Lauren Coombe, Justin Chu, René L. Warren, Benjamin P. Vandervalk, Sarah Yeo, Zhuyi Xue, Hamid Mohamadi, Jöerg Bohlmann, Steven J.M. Jones, İnanç Birol

    Publicat 2018
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  10. 10
    Mining the <scp>UniProtKB</scp>/Swiss‐Prot database for antimicrobial peptides

    Mining the <scp>UniProtKB</scp>/Swiss‐Prot database for antimicrobial peptides per Chenkai Li, Darcy Sutherland, Ali Salehi, Amelia Richter, Diana Lin, Sambina Islam Aninta, Hossein Ebrahimikondori, Anat Yanai, Lauren Coombe, René L. Warren, Monica Kotkoff, Linda Hoang, Caren C. Helbing, İnanç Birol

    Publicat 2025
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  11. 11
    Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure

    Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure per Shaun D. Jackman, Lauren Coombe, René L. Warren, Heather Kirk, Eva Trinh, Tina MacLeod, Stephen Pleasance, Pawan Pandoh, Yongjun Zhao, Robin Coope, Jean Bousquet, Jöerg Bohlmann, Steven J.M. Jones, İnanç Birol

    Publicat 2020
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  12. 12
    Spruce giga‐genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes

    Spruce giga‐genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes per Kristina Gagalova, René L. Warren, Lauren Coombe, Johnathan Wong, Ka Ming Nip, Macaire M. S. Yuen, Justin G. A. Whitehill, José M. Celedón, Carol Ritland, Greg Taylor, Dean Cheng, Patrick Plettner, S. Austin Hammond, Hamid Mohamadi, Yongjun Zhao, Richard A. Moore, Andrew J. Mungall, Brian Boyle, Jérôme Laroche, Joan Cottrell, John Mackay, Manuel Lamothe, Sebastien Gérardi, Nathalie Isabel, Nathalie Pavy, Steven J.M. Jones, Jöerg Bohlmann, Jean Bousquet, İnanç Birol

    Publicat 2022
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