Ohcanbohtosat - Lababidi, Samir

Interleukin-4 receptor alpha overexpression in human bladder cancer correlates with the pathological grade and stage of the disease Dahkki Joshi, Bharat H, Leland, Pamela, Lababidi, Samir, Varrichio, Frederick, Puri, Raj K

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Chromosomal Instability Is Associated with Higher Expression of Genes Implicated in Epithelial-Mesenchymal Transition, Cancer Invasiveness, and Metastasis and with Lower Expression... Dahkki Roschke, Anna V, Glebov, Oleg K, Lababidi, Samir, Gehlhaus, Kristen S, Weinstein, John N, Kirsch, Ilan R

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Interleukin-4 receptor targeted immunotherapy of human bladder cancer in animal models Dahkki Joshi, Bharat H, Suzuki, Akiko, Leland, Pamela, Lababidi, Samir, Varrichio, Frederick, Kreitman, Robert, Puri, Raj K

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Karyotypic “state” as a potential determinant for anticancer drug discovery Dahkki Roschke, Anna V., Lababidi, Samir, Tonon, Giovanni, Gehlhaus, Kristen S., Bussey, Kimberly, Weinstein, John N., Kirsch, Ilan R.

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Gene markers of cellular aging in human multipotent stromal cells in culture Dahkki Bellayr, Ian H, Catalano, Jennifer G, Lababidi, Samir, Yang, Amy X, Lo Surdo, Jessica L, Bauer, Steven R, Puri, Raj K

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In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases Dahkki McGarvey, Peter B, Suzek, Baris E, Baraniuk, James N, Rao, Shruti, Conkright, Brian, Lababidi, Samir, Sutherland, Andrea, Forshee, Richard, Madhavan, Subha

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Development of Gene Ontology Tool for Biological Interpretation of Genomic and Proteomic Data Dahkki Feng, Weimin, Wang, Geoffrey, Zeeberg, Barry R., Guo, Kejiao, Fojo, Anthony T., Kane, David W., Reinhold, William C., Lababidi, Samir, Weinstein, John N., Wang, May D.

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GoMiner: a resource for biological interpretation of genomic and proteomic data Dahkki Zeeberg, Barry R, Feng, Weimin, Wang, Geoffrey, Wang, May D, Fojo, Anthony T, Sunshine, Margot, Narasimhan, Sudarshan, Kane, David W, Reinhold, William C, Lababidi, Samir, Bussey, Kimberly J, Riss, Joseph, Barrett, J Carl, Weinstein, John N

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Comparing cDNA and oligonucleotide array data: concordance of gene expression across platforms for the NCI-60 cancer cells Dahkki Lee, Jae K, Bussey, Kimberly J, Gwadry, Fuad G, Reinhold, William, Riddick, Gregory, Pelletier, Sandra L, Nishizuka, Satoshi, Szakacs, Gergely, Annereau, Jean-Phillipe, Shankavaram, Uma, Lababidi, Samir, Smith, Lawrence H, Gottesman, Michael M, Weinstein, John N

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Best Practices for Benchmarking Germline Small Variant Calls in Human Genomes Dahkki Krusche, Peter, Trigg, Len, Boutros, Paul C., Mason, Christopher E., De La Vega, Francisco M., Moore, Benjamin L., Gonzalez-Porta, Mar, Eberle, Michael A., Tezak, Zivana, Lababidi, Samir, Truty, Rebecca, Asimenos, George, Funke, Birgit, Fleharty, Mark, Chapman, Brad A., Salit, Marc, Zook, Justin M

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Integrating data on DNA copy number with gene expression levels and drug sensitivities in the NCI-60 cell line panel Dahkki Bussey, Kimberly J., Chin, Koei, Lababidi, Samir, Reimers, Mark, Reinhold, William C., Kuo, Wen-Lin, Gwadry, Fuad, Ajay, Kouros-Mehr, Hosein, Fridlyand, Jane, Jain, Ajay, Collins, Colin, Nishizuka, Satoshi, Tonon, Giovanni, Roschke, Anna, Gehlhaus, Kristen, Kirsch, Ilan, Scudiero, Dominic A., Gray, Joe W., Weinstein, John N.

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Assessing reproducibility of inherited variants detected with short-read whole genome sequencing Dahkki Pan, Bohu, Ren, Luyao, Onuchic, Vitor, Guan, Meijian, Kusko, Rebecca, Bruinsma, Steve, Trigg, Len, Scherer, Andreas, Ning, Baitang, Zhang, Chaoyang, Glidewell-Kenney, Christine, Xiao, Chunlin, Donaldson, Eric, Sedlazeck, Fritz J., Schroth, Gary, Yavas, Gokhan, Grunenwald, Haiying, Chen, Haodong, Meinholz, Heather, Meehan, Joe, Wang, Jing, Yang, Jingcheng, Foox, Jonathan, Shang, Jun, Miclaus, Kelci, Dong, Lianhua, Shi, Leming, Mohiyuddin, Marghoob, Pirooznia, Mehdi, Gong, Ping, Golshani, Rooz, Wolfinger, Russ, Lababidi, Samir, Sahraeian, Sayed Mohammad Ebrahim, Sherry, Steve, Han, Tao, Chen, Tao, Shi, Tieliu, Hou, Wanwan, Ge, Weigong, Zou, Wen, Guo, Wenjing, Bao, Wenjun, Xiao, Wenzhong, Fan, Xiaohui, Gondo, Yoichi, Yu, Ying, Zhao, Yongmei, Su, Zhenqiang, Liu, Zhichao, Tong, Weida, Xiao, Wenming, Zook, Justin M., Zheng, Yuanting, Hong, Huixiao

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Comparison of RNA-seq and microarray-based models for clinical endpoint prediction Dahkki Zhang, Wenqian, Yu, Ying, Hertwig, Falk, Thierry-Mieg, Jean, Zhang, Wenwei, Thierry-Mieg, Danielle, Wang, Jian, Furlanello, Cesare, Devanarayan, Viswanath, Cheng, Jie, Deng, Youping, Hero, Barbara, Hong, Huixiao, Jia, Meiwen, Li, Li, Lin, Simon M, Nikolsky, Yuri, Oberthuer, André, Qing, Tao, Su, Zhenqiang, Volland, Ruth, Wang, Charles, Wang, May D., Ai, Junmei, Albanese, Davide, Asgharzadeh, Shahab, Avigad, Smadar, Bao, Wenjun, Bessarabova, Marina, Brilliant, Murray H., Brors, Benedikt, Chierici, Marco, Chu, Tzu-Ming, Zhang, Jibin, Grundy, Richard G., He, Min Max, Hebbring, Scott, Kaufman, Howard L., Lababidi, Samir, Lancashire, Lee J., Li, Yan, Lu, Xin X., Luo, Heng, Ma, Xiwen, Ning, Baitang, Noguera, Rosa, Peifer, Martin, Phan, John H., Roels, Frederik, Rosswog, Carolina, Shao, Susan, Shen, Jie, Theissen, Jessica, Tonini, Gian Paolo, Vandesompele, Jo, Wu, Po-Yen, Xiao, Wenzhong, Xu, Joshua, Xu, Weihong, Xuan, Jiekun, Yang, Yong, Ye, Zhan, Dong, Zirui, Zhang, Ke K., Yin, Ye, Zhao, Chen, Zheng, Yuanting, Wolfinger, Russell D., Shi, Tieliu, Malkas, Linda H., Berthold, Frank, Wang, Jun, Tong, Weida, Shi, Leming, Peng, Zhiyu, Fischer, Matthias

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Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing Dahkki Xiao, Wenming, Ren, Luyao, Chen, Zhong, Fang, Li Tai, Zhao, Yongmei, Lack, Justin, Guan, Meijian, Zhu, Bin, Jaeger, Erich, Kerrigan, Liz, Blomquist, Thomas M., Hung, Tiffany, Sultan, Marc, Idler, Kenneth, Lu, Charles, Scherer, Andreas, Kusko, Rebecca, Moos, Malcolm, Xiao, Chunlin, Sherry, Stephen T., Abaan, Ogan D., Chen, Wanqiu, Chen, Xin, Nordlund, Jessica, Liljedahl, Ulrika, Maestro, Roberta, Polano, Maurizio, Drabek, Jiri, Vojta, Petr, Kõks, Sulev, Reimann, Ene, Madala, Bindu Swapna, Mercer, Timothy, Miller, Chris, Jacob, Howard, Truong, Tiffany, Moshrefi, Ali, Natarajan, Aparna, Granat, Ana, Schroth, Gary P., Kalamegham, Rasika, Peters, Eric, Petitjean, Virginie, Walton, Ashley, Shen, Tsai-Wei, Talsania, Keyur, Vera, Cristobal Juan, Langenbach, Kurt, de Mars, Maryellen, Hipp, Jennifer A., Willey, James C., Wang, Jing, Shetty, Jyoti, Kriga, Yuliya, Raziuddin, Arati, Tran, Bao, Zheng, Yuanting, Yu, Ying, Cam, Margaret, Jailwala, Parthav, Nguyen, Cu, Meerzaman, Daoud, Chen, Qingrong, Yan, Chunhua, Ernest, Ben, Mehra, Urvashi, Jensen, Roderick V., Jones, Wendell, Li, Jian-Liang, Papas, Brian N., Pirooznia, Mehdi, Chen, Yun-Ching, Seifuddin, Fayaz, Li, Zhipan, Liu, Xuelu, Resch, Wolfgang, Wang, Jingya, Wu, Leihong, Yavas, Gokhan, Miles, Corey, Ning, Baitang, Tong, Weida, Mason, Christopher E., Donaldson, Eric, Lababidi, Samir, Staudt, Louis M., Tezak, Zivana, Hong, Huixiao, Wang, Charles, Shi, Leming

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