Zoekresultaten - Kerstin Howe

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  1. 1
    Using optical mapping data for the improvement of vertebrate genome assemblies

    Using optical mapping data for the improvement of vertebrate genome assemblies door Kerstin Howe, Jonathan Wood

    Gepubliceerd in 2015
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  2. 2
    gEVAL — a web-based browser for evaluating genome assemblies

    gEVAL — a web-based browser for evaluating genome assemblies door William Chow, Kim Brügger, Mario Cáccamo, Ian Sealy, James Torrance, Kerstin Howe

    Gepubliceerd in 2016
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  3. 3
    The vertebrate genome annotation (Vega) database

    The vertebrate genome annotation (Vega) database door Laurens Wilming, James Gilbert, Kerstin Howe, Stephen J. Trevanion, Tim Hubbard, Jennifer Harrow

    Gepubliceerd in 2007
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  4. 4
    Identifying and removing haplotypic duplication in primary genome assemblies

    Identifying and removing haplotypic duplication in primary genome assemblies door Dengfeng Guan, Shane McCarthy, Jonathan Wood, Kerstin Howe, Yadong Wang, Richard Durbin

    Gepubliceerd in 2020
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  5. 5
    Significantly improving the quality of genome assemblies through curation

    Significantly improving the quality of genome assemblies through curation door Kerstin Howe, William Chow, Joanna Collins, Sarah Pelan, Damon-Lee Pointon, Ying Sims, James Torrance, Alan Tracey, Jonathan Wood

    Gepubliceerd in 2021
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  6. 6
    Structure and evolutionary history of a large family of NLR proteins in the zebrafish

    Structure and evolutionary history of a large family of NLR proteins in the zebrafish door Kerstin Howe, Philipp H. Schiffer, Julia Zielinski, Thomas Wiehe, Gavin K. Laird, John C. Marioni, Onuralp Söylemez, Fyodor A. Kondrashov, Maria Leptin

    Gepubliceerd in 2016
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  7. 7
    Comparison of the Exomes of Common Carp (<i>Cyprinus carpio</i>) and Zebrafish (<i>Danio rerio</i>)

    Comparison of the Exomes of Common Carp (<i>Cyprinus carpio</i>) and Zebrafish (<i>Danio rerio</i>) door Christiaan V. Henkel, Ron P. Dirks, Hans J. Jansen, Maria Forlenza, Geert F. Wiegertjes, Kerstin Howe, Guido E.E.J.M. van den Thillart, Herman P. Spaink

    Gepubliceerd in 2012
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  8. 8
    Widespread false gene gains caused by duplication errors in genome assemblies

    Widespread false gene gains caused by duplication errors in genome assemblies door Byung June Ko, Chul Lee, Ju‐Wan Kim, Arang Rhie, Dong Ahn Yoo, Kerstin Howe, Jonathan Wood, Seoae Cho, Samara Brown, Giulio Formenti, Erich D. Jarvis, Heebal Kim

    Gepubliceerd in 2022
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  9. 9
    False gene and chromosome losses in genome assemblies caused by GC content variation and repeats

    False gene and chromosome losses in genome assemblies caused by GC content variation and repeats door Ju‐Wan Kim, Chul Lee, Byung June Ko, Dong Ahn Yoo, Sohyoung Won, Adam M. Phillippy, Olivier Fédrigo, Guojie Zhang, Kerstin Howe, Jonathan Wood, Richard Durbin, Giulio Formenti, Samara Brown, Lindsey Cantin, Claudio V. Mello, Seoae Cho, Arang Rhie, Heebal Kim, Erich D. Jarvis

    Gepubliceerd in 2022
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  10. 10
    A region of suppressed recombination misleads neoavian phylogenomics

    A region of suppressed recombination misleads neoavian phylogenomics door Siavash Mirarab, Iker Rivas-González, Shaohong Feng, Josefin Stiller, Qi Fang, Uyen Mai, Glenn Hickey, Guangji Chen, Nadolina Brajuka, Olivier Fédrigo, Giulio Formenti, Jochen B. W. Wolf, Kerstin Howe, Agostinho Antunes, Mikkel Heide Schierup, Benedict Paten, Erich D. Jarvis, Guojie Zhang, Edward L. Braun

    Gepubliceerd in 2024
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  11. 11
    The Genome of C57BL/6J “Eve”, the Mother of the Laboratory Mouse Genome Reference Strain

    The Genome of C57BL/6J “Eve”, the Mother of the Laboratory Mouse Genome Reference Strain door Vishal Sarsani, Narayanan Raghupathy, Ian T. Fiddes, Joel Armstrong, Françoise Thibaud‐Nissen, Oraya Zinder, Mohan Bolisetty, Kerstin Howe, Doug Hinerfeld, Xiaoan Ruan, Lucy B. Rowe, Mary Barter, Guruprasad Ananda, Benedict Paten, George M. Weinstock, Gary A. Churchill, Michael V. Wiles, Valérie Schneider, Anuj Srivastava, Laura G. Reinholdt

    Gepubliceerd in 2019
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  12. 12
    Genomic consequences of domestication of the Siamese fighting fish

    Genomic consequences of domestication of the Siamese fighting fish door Young Mi Kwon, Nathan Vranken, Carla Hoge, Madison R Lichak, Amy L. Norovich, Kerel X Francis, Julia Camacho-Garcia, Iliana Bista, Jonathan Wood, Shane McCarthy, William Chow, Heok Hui Tan, Kerstin Howe, Sepalika Bandara, Johannes von Lintig, Lukas Rüber, Richard Durbin, Hannes Svardal, Andrés Bendesky

    Gepubliceerd in 2022
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  13. 13
    Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

    Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies door Ann M. Mc Cartney, Kishwar Shafin, Michael Alonge, Andrey V. Bzikadze, Giulio Formenti, Arkarachai Fungtammasan, Kerstin Howe, Chirag Jain, Sergey Koren, Glennis A. Logsdon, Karen H. Miga, Alla Mikheenko, Benedict Paten, Alaina Shumate, Daniela C. Soto, Ivan Sović, Jonathan Wood, Justin M. Zook, Adam M. Phillippy, Arang Rhie

    Gepubliceerd in 2022
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  14. 14
    Ensembl 2007

    Ensembl 2007 door Tim Hubbard, Bronwen Aken, Kathryn Beal, Benoît Ballester, Mario Cáccamo, Y. Chen, Laura Clarke, Guy Coates, Fiona Cunningham, Tim Cutts, Thomas A. Down, Sarah Dyer, Stephen Fitzgerald, Julio Fernandez-Banet, Stefan Gräf, Syed Haider, M. Hammond, Javier Herrero, Richard Holland, Kerstin Howe, Kerstin Howe, Nathan Johnson, Andreas Kähäri, D. Keefe, Felix Kokocinski, Eugene Kulesha, Daniel Lawson, I. Longden, Craig Melsopp, Karyn Mégy, P. Meidl, B. Ouverdin, Anne Parker, Andreas Prlić, S. Rice, Daniel Ríos, Michael Schuster, I. Sealy, J. Severin, Guy Slater, D. Smedley, Giulietta Spudich, Stephen J. Trevanion, Albert J. Vilella, JĂśrg Vogel, Simon White, M. Wood, Tony Cox, V. Curwen, Richard Durbin, Xosé M. Fernández, Paul Flicek, A. Kasprzyk, Glenn Proctor, Stephen M. J. Searle, James Smith, A. Ureta-Vidal, Ewan Birney

    Gepubliceerd in 2006
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  15. 15
    The evolution of two transmissible cancers in Tasmanian devils

    The evolution of two transmissible cancers in Tasmanian devils door Maximilian R. Stammnitz, Kevin Gori, Young Mi Kwon, Edward Harry, Fergal J. Martin, Konstantinos Billis, Yuanyuan Cheng, Adrian Baez‐Ortega, William Chow, Sébastien Comte, Hannes P. Eggertsson, Samantha Fox, Rodrigo Hamede, Menna E. Jones, Billie Lazenby, Sarah Peck, Ruth J. Pye, Michael A. Quail, Kate Swift, Jinhong Wang, Jonathan Wood, Kerstin Howe, Michael R. Stratton, Zemin Ning, Elizabeth P. Murchison

    Gepubliceerd in 2023
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  16. 16
    A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

    A New Chicken Genome Assembly Provides Insight into Avian Genome Structure door Wesley C. Warren, LaDeana W. Hillier, Chad Tomlinson, Patrick Minx, Milinn Kremitzki, Tina Graves, Chris Markovic, Nathan Bouk, Kim D. Pruitt, Françoise Thibaud‐Nissen, Valérie Schneider, Tamer Mansour, C. Titus Brown, Aleksey V. Zimin, Rachel Hawken, Mitch Abrahamsen, Alexis Black Pyrkosz, Mireille Morisson, Valérie Fillon, Alain Vignal, William Chow, Kerstin Howe, Janet E. Fulton, Marcia M. Miller, Peter V. Lovell, Claudio V. Mello, Morgan Wirthlin, Andrew S. Mason, Richard Kuo, David W. Burt, Jerry B. Dodgson, Hans H. Cheng

    Gepubliceerd in 2017
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  17. 17
    The pig X and Y Chromosomes: structure, sequence, and evolution

    The pig X and Y Chromosomes: structure, sequence, and evolution door Benjamin M. Skinner, Carole A. Sargent, Carol Churcher, Toby Hunt, Javier Herrero, Jane Loveland, Matt Dunn, Sandra Louzada, Beiyuan Fu, William Chow, James Gilbert, Siobhan Austin-Guest, Kathryn Beal, Denise Carvalho‐Silva, William Cheng, Daria Gordon, Darren Grafham, Matt Hardy, Jo Harley, H. Häuser, Philip Howden, Kerstin Howe, Kim Lachani, Peter J. I. Ellis, Daniel Kelly, Giselle Kerry, James Kerwin, Bee Ling Ng, Glen Threadgold, Thomas M. Wileman, Jonathan Wood, Fengtang Yang, Jennifer Harrow, Nabeel A. Affara, Chris Tyler‐Smith

    Gepubliceerd in 2015
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  18. 18
    Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

    Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly door Valérie Schneider, Tina Graves-Lindsay, Kerstin Howe, Nathan Bouk, Hsiu-Chuan Chen, Paul Kitts, Terence D. Murphy, Kim D. Pruitt, Françoise Thibaud‐Nissen, Derek Albracht, Robert S. Fulton, Milinn Kremitzki, Vincent Magrini, Chris Markovic, Sean McGrath, Karyn Meltz Steinberg, Kate Auger, William Chow, Joanna Collins, Glenn Harden, Tim Hubbard, Sarah Pelan, Jared T. Simpson, Glen Threadgold, James Torrance, Jonathan Wood, Laura Clarke, Sergey Koren, Matthew Boitano, Heng Li, Chen-Shan Chin, Adam M. Phillippy, Richard Durbin, Richard K. Wilson, Paul Flicek, Deanna M. Church

    Gepubliceerd in 2016
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  19. 19
    A chromosome-level reference genome and pangenome for barn swallow population genomics

    A chromosome-level reference genome and pangenome for barn swallow population genomics door Simona Secomandi, Guido Roberto Gallo, Marcella Sozzoni, Alessio Iannucci, Elena Galati, Linelle Abueg, Jennifer Balacco, Manuela Caprioli, William Chow, Claúdio Ciofi, Joanna Collins, Olivier Fédrigo, Luca Ferretti, Arkarachai Fungtammasan, Bettina Haase, Kerstin Howe, Woori Kwak, Gianluca Lombardo, Patrick Masterson, Graziella Messina, Anders Pape Møller, Jacquelyn Mountcastle, Timothy A. Mousseau, Joan Ferrer, Anna Olivieri, Arang Rhie, Diego Rubolini, Marielle Saclier, Roscoe Stanyon, David Stucki, Françoise Thibaud‐Nissen, James Torrance, Antonio Torroni, Kristina Weber, Roberto Ambrosini, Andrea Bonisoli‐Alquati, Erich D. Jarvis, Luca Gianfranceschi, Giulio Formenti

    Gepubliceerd in 2023
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  20. 20
    Modernizing Reference Genome Assemblies

    Modernizing Reference Genome Assemblies door Deanna M. Church, Valérie Schneider, Tina Graves, Katherine A. Auger, Fiona Cunningham, Nathan Bouk, Hsiu-Chuan Chen, Richa Agarwala, William McLaren, Graham R. S. Ritchie, Derek Albracht, Milinn Kremitzki, Susan M. Rock, Holland Kotkiewicz, Colin Kremitzki, Aye Wollam, Lee Trani, Lucinda A. Fulton, Robert S. Fulton, Lucy Matthews, Siobhan Whitehead, William Chow, James Torrance, Matthew Dunn, Glenn Harden, Glen Threadgold, Jonathan Wood, Joanna Collins, P. D. Heath, Guy Griffiths, Sarah Pelan, Darren Grafham, Evan E. Eichler, George M. Weinstock, Elaine R. Mardis, Richard K. Wilson, Kerstin Howe, Paul Flicek, Tim Hubbard

    Gepubliceerd in 2011
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