Search Results - Karla E. Hirokawa

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  1. 1
    <i>Lhx2</i>links the intrinsic and extrinsic factors that control optic cup formation

    <i>Lhx2</i>links the intrinsic and extrinsic factors that control optic cup formation by Sanghee Yun, Yukio Saijoh, Karla E. Hirokawa, Daniel Kopinke, L. Charles Murtaugh, Edwin S. Monuki, Edward M. Levine

    Published 2009
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  2. 2
    Injury-independent induction of reactive gliosis in retina by loss of function of the LIM homeodomain transcription factor Lhx2

    Injury-independent induction of reactive gliosis in retina by loss of function of the LIM homeodomain transcription factor Lhx2 by Jimmy de Melo, Katsuaki Miki, Amir Rattner, Phil Smallwood, Cristina Zibetti, Karla E. Hirokawa, Edwin S. Monuki, Peter A. Campochiaro, Seth Blackshaw

    Published 2012
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  3. 3
    Whole brain imaging reveals distinct spatial patterns of amyloid beta deposition in three mouse models of Alzheimer's disease

    Whole brain imaging reveals distinct spatial patterns of amyloid beta deposition in three mouse models of Alzheimer's disease by Jennifer D. Whitesell, Alex R. Buckley, Joseph E. Knox, Leonard Kuan, Nile Graddis, Andrew Pelos, Alice Mukora, Wayne Wakeman, Phillip Bohn, Anh Ho, Karla E. Hirokawa, Julie A. Harris

    Published 2018
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  4. 4
    Lhx2 Selector Activity Specifies Cortical Identity and Suppresses Hippocampal Organizer Fate

    Lhx2 Selector Activity Specifies Cortical Identity and Suppresses Hippocampal Organizer Fate by Vishakha S. Mangale, Karla E. Hirokawa, P. R. V. Satyaki, Nandini Gokulchandran, Satyadeep Chikbire, Lakshmi Subramanian, Ashwin S. Shetty, Ben Martynoga, Jolly Paul, Mark Mai, Yuqing Li, Lisa A. Flanagan, Shubha Tole, Edwin S. Monuki

    Published 2008
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  5. 5
    Diverse Central Projection Patterns of Retinal Ganglion Cells

    Diverse Central Projection Patterns of Retinal Ganglion Cells by Emily M. Martersteck, Karla E. Hirokawa, Mariah Evarts, Amy Bernard, Xin Duan, Yang Li, Lydia Ng, Seung Wook Oh, Benjamin Ouellette, Joshua J. Royall, Michelle Stoecklin, Quanxin Wang, Hongkui Zeng, Joshua R. Sanes, Julie A. Harris

    Published 2017
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  6. 6
    Distinct Transcriptomic Cell Types and Neural Circuits of the Subiculum and Prosubiculum along the Dorsal-Ventral Axis

    Distinct Transcriptomic Cell Types and Neural Circuits of the Subiculum and Prosubiculum along the Dorsal-Ventral Axis by Song‐Lin Ding, Zizhen Yao, Karla E. Hirokawa, Thuc Nghi Nguyen, Lucas T. Graybuck, Olivia Fong, Phillip Bohn, Kiet Ngo, Kimberly A. Smith, Christof Koch, John W. Phillips, Ed S. Lein, Julie A. Harris, Bosiljka Tasic, Hongkui Zeng

    Published 2020
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  7. 7
    Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation

    Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation by Julie A. Harris, Karla E. Hirokawa, Staci A. Sorensen, Hong Gu, Maya Mills, Lydia Ng, Phillip Bohn, Marty Mortrud, Benjamin Ouellette, Jolene Kidney, Kimberly A. Smith, Chinh Dang, Susan M. Sunkin, Amy Bernard, Seung Wook Oh, Linda Madisen, Hongkui Zeng

    Published 2014
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  8. 8
    Regional and cell-type-specific afferent and efferent projections of the mouse claustrum

    Regional and cell-type-specific afferent and efferent projections of the mouse claustrum by Quanxin Wang, Yun Wang, Hsien-Chi Kuo, Peng Xie, Xiuli Kuang, Karla E. Hirokawa, Maitham Naeemi, Shenqin Yao, Matt Mallory, Ben Ouellette, Phil Lesnar, Yaoyao Li, Min Ye, Chao Chen, Wei Xiong, Leila Ahmadinia, Laila El-Hifnawi, Ali Çetin, Staci A. Sorensen, Julie A. Harris, Hongkui Zeng, Christof Koch

    Published 2023
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  9. 9
    The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas

    The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas by Quanxin Wang, Song‐Lin Ding, Yang Li, Josh Royall, David Feng, Phil Lesnar, Nile Graddis, Maitham Naeemi, Benjamin A.C. Facer, Anh Ho, Tim Dolbeare, Brandon Blanchard, Nick Dee, Wayne Wakeman, Karla E. Hirokawa, Aaron Szafer, Susan M. Sunkin, Seung Wook Oh, Amy Bernard, John W. Phillips, Michael Hawrylycz, Christof Koch, Hongkui Zeng, Julie A. Harris, Lydia Ng

    Published 2020
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  10. 10
    Regional, Layer, and Cell-Type-Specific Connectivity of the Mouse Default Mode Network

    Regional, Layer, and Cell-Type-Specific Connectivity of the Mouse Default Mode Network by Jennifer C. Whitesell, Adam Liska, Ludovico Coletta, Karla E. Hirokawa, Phillip Bohn, Ali Williford, Peter A. Groblewski, Nile Graddis, Leonard Kuan, Joseph E. Knox, Anh Ho, Wayne Wakeman, Philip R. Nicovich, Thuc Nghi Nguyen, Cindy T. J. van Velthoven, Emma Garren, Olivia Fong, Maitham Naeemi, Alex M. Henry, Nick Dee, Kimberly A. Smith, Boaz P. Levi, David Feng, Lydia Ng, Bosiljka Tasic, Hongkui Zeng, Ştefan Mihalaş, Alessandro Gozzi, Julie A. Harris

    Published 2020
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  11. 11
    A mesoscale connectome of the mouse brain

    A mesoscale connectome of the mouse brain by Seung Wook Oh, Julie A. Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Ştefan Mihalaş, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M. Henry, Marty Mortrud, Benjamin Ouellette, Thuc Nghi Nguyen, Staci A. Sorensen, Clifford R. Slaughterbeck, Wayne Wakeman, Li Yang, David Feng, Anh Ho, Eric Nicholas, Karla E. Hirokawa, Phillip Bohn, Kevin Joines, Hanchuan Peng, Michael Hawrylycz, John W. Phillips, John G. Hohmann, Paul Wohnoutka, Charles R. Gerfen, Christof Koch, Amy Bernard, Chinh Dang, Allan R. Jones, Hongkui Zeng

    Published 2014
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  12. 12
    The organization of intracortical connections by layer and cell class in the mouse brain

    The organization of intracortical connections by layer and cell class in the mouse brain by Julie A. Harris, Ştefan Mihalaş, Karla E. Hirokawa, Jennifer D. Whitesell, Joseph E. Knox, Amy Bernard, Phillip Bohn, Shiella Caldejon, Linzy Casal, Andrew Cho, David Feng, Nathalie Gaudreault, Charles R. Gerfen, Nile Graddis, Peter A. Groblewski, Alex M. Henry, Anh Ho, Robert Howard, Leonard Kuan, Jérôme Lecoq, Jennifer Luviano, Stephen McConoghy, Marty Mortrud, Maitham Naeemi, Lydia Ng, Seung Wook Oh, Benjamin Ouellette, Staci A. Sorensen, Wayne Wakeman, Quanxin Wang, Ali Williford, John W. Phillips, Allan R. Jones, Christof Koch, Hongkui Zeng

    Published 2018
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  13. 13
    A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality

    A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality by Tanya L. Daigle, Linda Madisen, Travis A Hage, Matthew T. Valley, Ulf Knoblich, Rylan S. Larsen, Marc Takeno, Lawrence Huang, Hong Gu, Rachael Larsen, Maya Mills, Alice Bosma-Moody, La’Akea Siverts, Miranda Walker, Lucas T. Graybuck, Zizhen Yao, Olivia Fong, Thuc Nghi Nguyen, Emma Garren, Garreck Lenz, Mariya Chavarha, Julie Pendergraft, James Harrington, Karla E. Hirokawa, Julie A. Harris, Philip R. Nicovich, Mary McGraw, Douglas R. Ollerenshaw, Kimberly A. Smith, Christopher A. Baker, Jonathan T. Ting, Susan M. Sunkin, Jérôme Lecoq, Michael Z. Lin, Edward S. Boyden, Gabe J. Murphy, Nuno Maçarico da Costa, Jack Waters, Lu Li, Bosiljka Tasic, Hongkui Zeng

    Published 2018
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  14. 14
    Hierarchical organization of cortical and thalamic connectivity

    Hierarchical organization of cortical and thalamic connectivity by Julie A. Harris, Ştefan Mihalaş, Karla E. Hirokawa, Jennifer D. Whitesell, Hannah Choi, Amy Bernard, Phillip Bohn, Shiella Caldejon, Linzy Casal, Andrew Cho, Aaron Feiner, David Feng, Nathalie Gaudreault, Charles R. Gerfen, Nile Graddis, Peter A. Groblewski, Alex M. Henry, Anh Ho, Robert Howard, Joseph E. Knox, Leonard Kuan, Xiuli Kuang, Jérôme Lecoq, Phil Lesnar, Yaoyao Li, Jennifer Luviano, Stephen J. McConoughey, Marty Mortrud, Maitham Naeemi, Lydia Ng, Seung Wook Oh, Benjamin Ouellette, Elise Shen, Staci A. Sorensen, Wayne Wakeman, Quanxin Wang, Yun Wang, Ali Williford, John W. Phillips, Allan R. Jones, Christof Koch, Hongkui Zeng

    Published 2019
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  15. 15
    A whole-brain monosynaptic input connectome to neuron classes in mouse visual cortex

    A whole-brain monosynaptic input connectome to neuron classes in mouse visual cortex by Shenqin Yao, Quanxin Wang, Karla E. Hirokawa, Benjamin Ouellette, Ruweida Ahmed, Jasmin Bomben, Krissy Brouner, Linzy Casal, Shiella Caldejon, Andy Cho, Nadezhda Dotson, Tanya L. Daigle, Tom Egdorf, Rachel Enstrom, Amanda Gary, Emily Gelfand, Melissa Gorham, Fiona Griffin, Hong Gu, Nicole Hancock, Robert Howard, Leonard Kuan, Sophie Lambert, Eric Lee, Jennifer Luviano, Kyla Mace, Michelle Maxwell, Marty Mortrud, Maitham Naeemi, Chelsea Nayan, Nhan-Kiet Ngo, Thuyanh V. Nguyen, Kat North, Shea Ransford, Augustin Ruiz, Sam Seid, Jackie Swapp, Michael J. Taormina, Wayne Wakeman, Thomas Zhou, Philip R. Nicovich, Ali Williford, Lydia Potekhina, Mary McGraw, Lydia Ng, Peter A. Groblewski, Bosiljka Tasic, Ştefan Mihalaş, Julie A. Harris, Ali Çetin, Hongkui Zeng

    Published 2022
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  16. 16
    Shared and distinct transcriptomic cell types across neocortical areas

    Shared and distinct transcriptomic cell types across neocortical areas by Bosiljka Tasic, Zizhen Yao, Lucas T. Graybuck, Kimberly A. Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N. Economo, Sarada Viswanathan, Osnat Penn, Trygve E. Bakken, Vilas Menon, Jeremy A. Miller, Olivia Fong, Karla E. Hirokawa, Kanan Lathia, Christine Rimorin, Michael Tieu, Rachael Larsen, Tamara Casper, Eliza Barkan, Matthew Kroll, Sheana Parry, Nadiya V. Shapovalova, Daniel Hirschstein, Julie Pendergraft, Heather A. Sullivan, Tae Kyung Kim, Aaron Szafer, Nick Dee, Peter A. Groblewski, Ian R. Wickersham, Ali Çetin, Julie A. Harris, Boaz P. Levi, Susan M. Sunkin, Linda Madisen, Tanya L. Daigle, Loren L. Looger, Amy Bernard, John W. Phillips, Ed S. Lein, Michael Hawrylycz, Karel Svoboda, Allan R. Jones, Christof Koch, Hongkui Zeng

    Published 2018
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  17. 17
    Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types

    Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types by Hanchuan Peng, Peng Xie, Lijuan Liu, Xiuli Kuang, Yimin Wang, Lei Qu, Hui Gong, Shengdian Jiang, Anan Li, Zongcai Ruan, Liya Ding, Chao Chen, Mengya Chen, Tanya L. Daigle, Zhangcan Ding, Yanjun Duan, Aaron Feiner, Ping He, Chris Hill, Karla E. Hirokawa, Guodong Hong, Lei Huang, Sara Kebede, Hsien-Chi Kuo, Rachael Larsen, Phil Lesnar, Longfei Li, Qi Li, Xiangning Li, Yaoyao Li, Yuanyuan Li, An Liu, Donghuan Lu, Stephanie Mok, Lydia Ng, Thuc Nghi Nguyen, Qiang Ouyang, Jintao Pan, Elise Shen, Yuanyuan Song, Susan M. Sunkin, Bosiljka Tasic, Matthew B. Veldman, Wayne Wakeman, Wan Wan, Peng Wang, Quanxin Wang, Tao Wang, Yaping Wang, Feng Xiong, Wei Xiong, Wenjie Xu, Zizhen Yao, Min Ye, Lulu Yin, Yang Yu, Jia Yuan, Jing Yuan, Zhixi Yun, Shaoqun Zeng, Shichen Zhang, Sujun Zhao, Zijun Zhao, Zhi Zhou, Z. Josh Huang, Luke Esposito, Michael Hawrylycz, Staci A. Sorensen, X. William Yang, Yefeng Zheng, Zhongze Gu, Wei Xie, Christof Koch, Qingming Luo, Julie A. Harris, Yun Wang, Hongkui Zeng

    Published 2019
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  18. 18
    Morphological diversity of single neurons in molecularly defined cell types

    Morphological diversity of single neurons in molecularly defined cell types by Hanchuan Peng, Peng Xie, Lijuan Liu, Xiuli Kuang, Yimin Wang, Lei Qu, Hui Gong, Shengdian Jiang, Anan Li, Zongcai Ruan, Liya Ding, Zizhen Yao, Chao Chen, Mengya Chen, Tanya L. Daigle, Rachel Dalley, Zhangcan Ding, Yanjun Duan, Aaron Feiner, Ping He, Chris Hill, Karla E. Hirokawa, Guodong Hong, Lei Huang, Sara Kebede, Hsien-Chi Kuo, Rachael Larsen, Phil Lesnar, Longfei Li, Qi Li, Xiangning Li, Yaoyao Li, Yuanyuan Li, An Liu, Donghuan Lu, Stephanie Mok, Lydia Ng, Thuc Nghi Nguyen, Qiang Ouyang, Jintao Pan, Elise Shen, Yuanyuan Song, Susan M. Sunkin, Bosiljka Tasic, Matthew B. Veldman, Wayne Wakeman, Wan Wan, Peng Wang, Quanxin Wang, Tao Wang, Yaping Wang, Feng Xiong, Wei Xiong, Wenjie Xu, Min Ye, Lulu Yin, Yang Yu, Jia Yuan, Jing Yuan, Zhixi Yun, Shaoqun Zeng, Shichen Zhang, Sujun Zhao, Zijun Zhao, Zhi Zhou, Z. Josh Huang, Luke Esposito, Michael Hawrylycz, Staci A. Sorensen, X. William Yang, Yefeng Zheng, Zhongze Gu, Wei Xie, Christof Koch, Qingming Luo, Julie A. Harris, Yun Wang, Hongkui Zeng

    Published 2021
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  19. 19
    Cellular anatomy of the mouse primary motor cortex

    Cellular anatomy of the mouse primary motor cortex by Rodrigo Muñoz-Castañeda, Brian Zingg, Katherine S. Matho, Xiaoyin Chen, Quanxin Wang, Nicholas N. Foster, Anan Li, Arun Narasimhan, Karla E. Hirokawa, Bing‐Xing Huo, Samik Bannerjee, Laura Korobkova, Chris Sin Park, Young-Gyun Park, Michael S. Bienkowski, Uree Chon, Diek W. Wheeler, Xiangning Li, Yun Wang, Maitham Naeemi, Peng Xie, Lijuan Liu, Kathleen Kelly, Xu An, Sarojini M. Attili, Ian Bowman, Anastasiia Bludova, Ali Çetin, Liya Ding, Rhonda Drewes, Florence D. D’Orazi, Corey Elowsky, Stephan Fischer, William Galbavy, Lei Gao, Jesse Gillis, Peter A. Groblewski, Lin Gou, Joel D. Hahn, Joshua Hatfield, Houri Hintiryan, Junxiang Huang, Hideki Kondo, Xiuli Kuang, Philip Lesnar, Xu Li, Yaoyao Li, Meng-Kuan Lin, D.C.W. Lo, Judith Mizrachi, Stephanie Mok, Philip R. Nicovich, Ramesh Palaniswamy, Jason Palmer, Xiaoli Qi, Elise Shen, Yu-Chi Sun, Huizhong W. Tao, Wayne Wakemen, Yimin Wang, Shenqin Yao, Jing Yuan, Huiqing Zhan, Muye Zhu, Lydia Ng, Li I. Zhang, Byung Kook Lim, Michael Hawrylycz, Hui Gong, James C. Gee, Yongsoo Kim, Kwanghun Chung, X. William Yang, Hanchuan Peng, Qingming Luo, Partha P. Mitra, Anthony M. Zador, Hongkui Zeng, Giorgio A. Ascoli, Z. Josh Huang, Pavel Osten, Julie A. Harris, Hong‐Wei Dong

    Published 2021
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  20. 20
    Inferring cortical function in the mouse visual system through large-scale systems neuroscience

    Inferring cortical function in the mouse visual system through large-scale systems neuroscience by Michael Hawrylycz, Costas A. Anastassiou, Anton Arkhipov, Jim Berg, Michael A. Buice, Nicholas Cain, Nathan W. Gouwens, Sergey L. Gratiy, Ramakrishnan Iyer, Jung H. Lee, Ştefan Mihalaş, Catalin Mitelut, Shawn R. Olsen, R. Clay Reid, Corinne Teeter, Saskia de Vries, Jack Waters, Hongkui Zeng, Christof Koch, Costas A. Anastassiou, Anton Arkhipov, Chris Barber, Lynne A. Becker, Jim Berg, Jim Berg, Amy Bernard, Darren Bertagnolli, Kris Bickley, Adam Bleckert, Nicole Blesie, Ágnes L. Bodor, Phil Bohn, Nick Bowles, Krissy Brouner, Michael A. Buice, Dan Bumbarger, Nicholas Cain, Shiella Caldejon, Linzy Casal, Tamara Casper, Ali Çetin, Mike Chapin, Soumya Chatterjee, A. Y. Cheng, Nuno da Costa, Sissy Cross, Christine Cuhaciyan, Tanya L. Daigle, Chinh Dang, Bethanny Danskin, Tsega Desta, Saskia de Vries, Nick Dee, Daniel J. Denman, Tim Dolbeare, Ashley Donimirski, Nadia Dotson, Séverine Durand, Colin Farrell, David Feng, Michael Fisher, Tim Fliss, Aleena R. Garner, Marina Garrett, Marisa Garwood, Nathalie Gaudreault, Terri L. Gilbert, H. Gill, Olga Gliko, Keith B. Godfrey, Jeff Goldy, Nathan W. Gouwens, Sergey L. Gratiy, Lucas T. Gray, Fiona Griffin, Peter A. Groblewski, Hong Gu, Guangyu Gu, Caroline Habel, Kristen Hadley, Zeb Haradon, James Harrington, Julie A. Harris, Michael Hawrylycz, Alex M. Henry, Nika Hejazinia, Chris Hill, DiJon Hill, Karla E. Hirokawa, Anh Ho, Robert Howard, Jaclyn Huffman, Ram Iyer, Tim Jarsky, Justin Johal, Tom Keenan, Sean Kim, Ulf Knoblich, Christof Koch, Ali Kriedberg

    Published 2016
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