Výsledky vyhledávání - Kamil Slowikowski

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  1. 1
    SNPsea: an algorithm to identify cell types, tissues and pathways affected by risk loci

    SNPsea: an algorithm to identify cell types, tissues and pathways affected by risk loci Autor Kamil Slowikowski, Xinli Hu, Soumya Raychaudhuri

    Vydáno 2014
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    Artigo
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  2. 2
    Single-cell transcriptomics in cancer: computational challenges and opportunities

    Single-cell transcriptomics in cancer: computational challenges and opportunities Autor Jean Fan, Kamil Slowikowski, Fan Zhang

    Vydáno 2020
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  3. 3
    Fast, sensitive, and accurate integration of single cell data with Harmony

    Fast, sensitive, and accurate integration of single cell data with Harmony Autor Ilya Korsunsky, Jean Fan, Kamil Slowikowski, Fan Zhang, Kevin Wei, Yuriy Baglaenko, Michael B. Brenner, Po‐Ru Loh, Soumya Raychaudhuri

    Vydáno 2018
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  4. 4
    Disentangling the Effects of Colocalizing Genomic Annotations to Functionally Prioritize Non-coding Variants within Complex-Trait Loci

    Disentangling the Effects of Colocalizing Genomic Annotations to Functionally Prioritize Non-coding Variants within Complex-Trait Loci Autor Gosia Trynka, Harm-Jan Westra, Kamil Slowikowski, Xinli Hu, Han Xu, Barbara E. Stranger, Robert J. Klein, Buhm Han, Soumya Raychaudhuri

    Vydáno 2015
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    Artigo
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  5. 5
    Fast, sensitive and accurate integration of single-cell data with Harmony

    Fast, sensitive and accurate integration of single-cell data with Harmony Autor Ilya Korsunsky, Nghia Millard, Jean Fan, Kamil Slowikowski, Fan Zhang, Kevin Wei, Yuriy Baglaenko, Michael B. Brenner, Po‐Ru Loh, Soumya Raychaudhuri

    Vydáno 2019
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  6. 6
    Using genetics to prioritize diagnoses for rheumatology outpatients with inflammatory arthritis

    Using genetics to prioritize diagnoses for rheumatology outpatients with inflammatory arthritis Autor Rachel Knevel, Saskia le Cessie, Chikashi Terao, Kamil Slowikowski, Jing Cui, T. Huizinga, Karen H. Costenbader, Katherine P. Liao, Elizabeth W. Karlson, Soumya Raychaudhuri

    Vydáno 2020
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    Artigo
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  7. 7
    CUX1 and IκBζ (NFKBIZ) mediate the synergistic inflammatory response to TNF and IL-17A in stromal fibroblasts

    CUX1 and IκBζ (NFKBIZ) mediate the synergistic inflammatory response to TNF and IL-17A in stromal fibroblasts Autor Kamil Slowikowski, Hung N. Nguyen, Erika H. Noss, Daimon P. Simmons, Fumitaka Mizoguchi, Gerald F. Watts, Michael F. Gurish, Michael B. Brenner, Soumya Raychaudhuri

    Vydáno 2020
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  8. 8
    Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions

    Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions Autor María Gutiérrez‐Arcelus, Nikola C. Teslovich, Alex R. Mola, Rafael B. Polidoro, Aparna Nathan, Hyun Kim, Susan Hannes, Kamil Slowikowski, Gerald F. Watts, Ilya Korsunsky, Michael B. Brenner, Soumya Raychaudhuri, Patrick J. Brennan

    Vydáno 2019
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  9. 9
    Regulation of Gene Expression in Autoimmune Disease Loci and the Genetic Basis of Proliferation in CD4+ Effector Memory T Cells

    Regulation of Gene Expression in Autoimmune Disease Loci and the Genetic Basis of Proliferation in CD4+ Effector Memory T Cells Autor Xinli Hu, Hyun Kim, Towfique Raj, Patrick J. Brennan, Gosia Trynka, Nikola C. Teslovich, Kamil Slowikowski, Wei‐Min Chen, Suna Önengüt, Clare Baecher‐Allan, Philip L. De Jager, Stephen S. Rich, Barbara E. Stranger, Michael B. Brenner, Soumya Raychaudhuri

    Vydáno 2014
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  10. 10
    Discovering in vivo cytokine-eQTL interactions from a lupus clinical trial

    Discovering in vivo cytokine-eQTL interactions from a lupus clinical trial Autor Emma E. Davenport, Tiffany Amariuta, María Gutiérrez‐Arcelus, Kamil Slowikowski, Harm-Jan Westra, Yang Luo, Ciyue Shen, Deepak A. Rao, Ying Zhang, Stephen Pearson, David von Schack, Jean S. Beebe, Nan Bing, Sally John, Michael S. Vincent, Baohong Zhang, Soumya Raychaudhuri

    Vydáno 2018
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  11. 11
    Tumor location as a risk factor for severe immune-related adverse events

    Tumor location as a risk factor for severe immune-related adverse events Autor Steven M. Blum, Ben Ouyang, Leyre Zubiri, David A. Leonard, Kamil Slowikowski, Mike Wang, Kelley Grealish, Nora Hathaway, Gabriel E. Molina, Nishi Shah, Donald P. Lawrence, Michael Dougan, Alexandra‐Chloé Villani, Mari Mino Kendusen, Kerry L. Reynolds, Ryan J. Sullivan

    Vydáno 2025
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  12. 12
    Refining the role of de novo protein-truncating variants in neurodevelopmental disorders by using population reference samples

    Refining the role of de novo protein-truncating variants in neurodevelopmental disorders by using population reference samples Autor Jack A. Kosmicki, Kaitlin E. Samocha, Daniel P. Howrigan, Stephan Sanders, Kamil Slowikowski, Monkol Lek, Konrad J. Karczewski, David J. Cutler, Bernie Devlin, Kathryn Roeder, Joseph D. Buxbaum, Benjamin M. Neale, Daniel G. MacArthur, Dennis P. Wall, Elise Robinson, Mark J. Daly

    Vydáno 2017
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  13. 13
    A method to decipher pleiotropy by detecting underlying heterogeneity driven by hidden subgroups applied to autoimmune and neuropsychiatric diseases

    A method to decipher pleiotropy by detecting underlying heterogeneity driven by hidden subgroups applied to autoimmune and neuropsychiatric diseases Autor Buhm Han, Jennie G. Pouget, Kamil Slowikowski, Eli Stahl, Cue Hyunkyu Lee, Dorothée Diogo, Xinli Hu, Yu Rang Park, Eunji Kim, Peter K. Gregersen, Solbritt Rantapää‐Dahlqvist, Jane Worthington, Javier Martı́n, Stephen Eyre, Lars Klareskog, T. Huizinga, Wei‐Min Chen, Suna Önengüt-Gümüşcü, Stephen S. Rich, Naomi R. Wray, Soumya Raychaudhuri

    Vydáno 2016
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  14. 14
    Mixed-effects association of single cells identifies an expanded effector CD4<sup>+</sup>T cell subset in rheumatoid arthritis

    Mixed-effects association of single cells identifies an expanded effector CD4<sup>+</sup>T cell subset in rheumatoid arthritis Autor Chamith Y. Fonseka, Deepak A. Rao, Nikola C. Teslovich, Ilya Korsunsky, Susan Hannes, Kamil Slowikowski, Michael F. Gurish, Laura T. Donlin, Eddie A. James, Michael E. Weinblatt, Elena Massarotti, Jonathan S. Coblyn, Simon M. Helfgott, Derrick J. Todd, Vivian P. Bykerk, Elizabeth W. Karlson, Joerg Ermann, Yvonne Lee, Michael B. Brenner, Soumya Raychaudhuri

    Vydáno 2018
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  15. 15
    A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma

    A human model of asthma exacerbation reveals transcriptional programs and cell circuits specific to allergic asthma Autor Jehan Alladina, Neal P. Smith, Tristan Kooistra, Kamil Slowikowski, Isabela Kernin, Jacques Deguine, Henry L. Keen, Kasidet Manakongtreecheep, Jessica Tantivit, Rod A. Rahimi, Susan L. Sheng, Nhan D. Nguyen, Alexis M. Haring, Francesca Giacona, Lida P. Hariri, Ramnik J. Xavier, Andrew D. Luster, Alexandra‐Chloé Villani, Christina Schofield, Benjamin D. Medoff

    Vydáno 2023
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  16. 16
    Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

    Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types Autor Hilary K. Finucane, Yakir Reshef, Verneri Anttila, Kamil Slowikowski, Alexander Gusev, Andrea Byrnes, Steven Gazal, Po‐Ru Loh, Caleb A. Lareau, Noam Shoresh, Giulio Genovese, Arpiar Saunders, Evan Z. Macosko, Samuela Pollack, John R. B. Perry, Jason D. Buenrostro, B Bernstein, Soumya Raychaudhuri, Steven A. McCarroll, Benjamin M. Neale, Alkes L. Price

    Vydáno 2018
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  17. 17
    Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells

    Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells Autor Mark N. Lee, Chun Ye, Alexandra‐Chloé Villani, Towfique Raj, Weibo Li, Thomas Eisenhaure, Selina Imboywa, Portia Chipendo, F. Ann Ran, Kamil Slowikowski, Lucas D. Ward, Khadir Raddassi, Cristin McCabe, Michelle Lee, Irene Y. Frohlich, D Hafler, Manolis Kellis, Soumya Raychaudhuri, Feng Zhang, Barbara E. Stranger, Christophe Benoist, Philip L. De Jager, Aviv Regev, Nir Hacohen

    Vydáno 2014
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  18. 18
    Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways

    Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways Autor Evan Der, Hemant Suryawanshi, Pavel Morozov, Manjunath Kustagi, Béatrice Goilav, Saritha Ranabothu, Peter Izmirly, Robert M. Clancy, H. Michael Belmont, Mordecai Koenigsberg, Michele H. Mokrzycki, Helen Rominieki, Jay A. Graham, Juan P. Rocca, Nicole Bornkamp, Nicole Jordan, Emma Schulte, Ming Wu, James Pullman, Kamil Slowikowski, Soumya Raychaudhuri, Joel M. Guthridge, Judith A. James, Jill P. Buyon, Thomas Tuschl, Chaim Putterman

    Vydáno 2019
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  19. 19
    A positively selected FBN1 missense variant reduces height in Peruvian individuals

    A positively selected FBN1 missense variant reduces height in Peruvian individuals Autor Samira Asgari, Yang Luo, Ali Akbari, Gillian M. Belbin, Xinyi Li, Daniel Harris, Martin K. Selig, Eric Bartell, Roger Calderón, Kamil Slowikowski, Carmen Contreras, Rosa Yataco, Jerome T. Galea, Judith Jiménez, Julia Coit, Chandel Farroñay, Rosalynn M. Nazarian, Timothy D. O’Connor, Harry C. Dietz, Joel N. Hirschhorn, Heinner Guio, Leonid Lecca, Eimear E. Kenny, Esther E. Freeman, Megan Murray, Soumya Raychaudhuri

    Vydáno 2020
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  20. 20
    Functionally distinct disease-associated fibroblast subsets in rheumatoid arthritis

    Functionally distinct disease-associated fibroblast subsets in rheumatoid arthritis Autor Fumitaka Mizoguchi, Kamil Slowikowski, Kevin Wei, Jennifer L. Marshall, Deepak A. Rao, Sook Kyung Chang, Hung Nguyen, Erika H. Noss, Jason D. Turner, Brandon E. Earp, Philip Blazar, John Wright, Barry P. Simmons, Laura T. Donlin, George D. Kalliolias, Susan M. Goodman, Vivian P. Bykerk, Lionel B. Ivashkiv, Eddie A. James, Nir Hacohen, Peter A. Nigrović, Andrew Filer, Christopher D. Buckley, Soumya Raychaudhuri, Michael B. Brenner

    Vydáno 2018
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