Hakutulokset - Justin M. Zook

Tarkenna hakua
  1. 1
    svviz: a read viewer for validating structural variants

    svviz: a read viewer for validating structural variants Tekijä Noah Spies, Justin M. Zook, Marc Salit, Arend Sidow

    Julkaistu 2015
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  2. 2
    Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing

    Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing Tekijä Justin M. Zook, Daniel V. Samarov, Jennifer McDaniel, Shurjo K. Sen, Marc Salit

    Julkaistu 2012
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  3. 3
    LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads

    LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads Tekijä Helyaneh Ziaei Jam, Justin M. Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek

    Julkaistu 2024
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  4. 4
    An analytical framework for optimizing variant discovery from personal genomes

    An analytical framework for optimizing variant discovery from personal genomes Tekijä Gareth Highnam, Jason Wang, Dean Kusler, Justin M. Zook, Vinaya Vijayan, Nir Leibovich, David Mittelman

    Julkaistu 2015
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  5. 5
    Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls

    Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls Tekijä Justin M. Zook, Brad Chapman, Jason Wang, David Mittelman, Oliver Hofmann, Yoshihide Hayashizaki, Marc Salit

    Julkaistu 2014
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  6. 6
    Integrating sequencing datasets to form highly confident SNP and indel genotype calls for a whole human genome

    Integrating sequencing datasets to form highly confident SNP and indel genotype calls for a whole human genome Tekijä Justin M. Zook, Brad Chapman, Jason Wang, David Mittelman, Oliver Hofmann, Yoshihide Hayashizaki, Marc Salit

    Julkaistu 2013
    Hae kokoteksti
    Pré-impressão
    Lisää suosikkeihin
    Tallennettuna:
  7. 7
    Multiscale analysis of pangenomes enables improved representation of genomic diversity for repetitive and clinically relevant genes

    Multiscale analysis of pangenomes enables improved representation of genomic diversity for repetitive and clinically relevant genes Tekijä Chen-Shan Chin, Sairam Behera, Asif Khalak, Fritz J. Sedlazeck, Peter H. Sudmant, Justin Wagner, Justin M. Zook

    Julkaistu 2023
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  8. 8
    Medical implications of technical accuracy in genome sequencing

    Medical implications of technical accuracy in genome sequencing Tekijä Rachel L. Goldfeder, James R. Priest, Justin M. Zook, Megan E. Grove, Daryl Waggott, Matthew T. Wheeler, Marc Salit, Euan A. Ashley

    Julkaistu 2016
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  9. 9
    Genome-wide reconstruction of complex structural variants using read clouds

    Genome-wide reconstruction of complex structural variants using read clouds Tekijä Noah Spies, Ziming Weng, Alex Bishara, Jennifer McDaniel, David Catoe, Justin M. Zook, Marc Salit, Robert B. West, Serafim Batzoglou, Arend Sidow

    Julkaistu 2017
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  10. 10
    svclassify: a method to establish benchmark structural variant calls

    svclassify: a method to establish benchmark structural variant calls Tekijä Hemang Parikh, Marghoob Mohiyuddin, Hugo Y. K. Lam, Hariharan Iyer, Desu Chen, Mark Pratt, Gábor Bartha, Noah Spies, Wolfgang Losert, Justin M. Zook, Marc Salit

    Julkaistu 2016
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  11. 11
    Assembly and annotation of an Ashkenazi human reference genome

    Assembly and annotation of an Ashkenazi human reference genome Tekijä Alaina Shumate, Aleksey V. Zimin, Rachel M. Sherman, Daniela Puiu, Justin Wagner, Nathan D. Olson, Mihaela Pertea, Marc Salit, Justin M. Zook, Steven L. Salzberg

    Julkaistu 2020
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  12. 12
    A Rigorous Interlaboratory Examination of the Need to Confirm Next-Generation Sequencing–Detected Variants with an Orthogonal Method in Clinical Genetic Testing

    A Rigorous Interlaboratory Examination of the Need to Confirm Next-Generation Sequencing–Detected Variants with an Orthogonal Method in Clinical Genetic Testing Tekijä Stephen E. Lincoln, Rebecca Truty, Chiao‐Feng Lin, Justin M. Zook, Joshua Paul, Vincent H. Ramey, Marc Salit, Heidi L. Rehm, Robert L. Nussbaum, Matthew S. Lebo

    Julkaistu 2019
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  13. 13
    Best practices for evaluating single nucleotide variant calling methods for microbial genomics

    Best practices for evaluating single nucleotide variant calling methods for microbial genomics Tekijä Nathan D. Olson, Steven P. Lund, Rebecca E. Colman, Jeffrey T. Foster, Jason W. Sahl, James M. Schupp, Paul Keim, Jayne B. Morrow, Marc Salit, Justin M. Zook

    Julkaistu 2015
    Hae kokoteksti Hae kokoteksti
    Revisão
    Lisää suosikkeihin
    Tallennettuna:
  14. 14
    Reproducible integration of multiple sequencing datasets to form high-confidence SNP, indel, and reference calls for five human genome reference materials

    Reproducible integration of multiple sequencing datasets to form high-confidence SNP, indel, and reference calls for five human genome reference materials Tekijä Justin M. Zook, Jennifer McDaniel, Hemang Parikh, Haynes Heaton, Sean A. Irvine, Len Trigg, Rebecca Truty, Cory Y. McLean, Francisco M. De La Vega, Chunlin Xiao, Stephen T. Sherry, Marc Salit

    Julkaistu 2018
    Hae kokoteksti Hae kokoteksti
    Pré-impressão
    Lisää suosikkeihin
    Tallennettuna:
  15. 15
    FixItFelix: improving genomic analysis by fixing reference errors

    FixItFelix: improving genomic analysis by fixing reference errors Tekijä Sairam Behera, Jonathon LeFaive, Peter Orchard, Medhat Mahmoud, Luis F. Paulin, Jesse Farek, Daniela C. Soto, Stephen C. J. Parker, Albert V. Smith, Megan Y. Dennis, Justin M. Zook, Fritz J. Sedlazeck

    Julkaistu 2023
    Hae kokoteksti Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  16. 16
    The GIAB genomic stratifications resource for human reference genomes

    The GIAB genomic stratifications resource for human reference genomes Tekijä Nathan Dwarshuis, Divya Kalra, Jennifer McDaniel, Philippe Sanio, Pilar Álvarez Jerez, Bharati Jadhav, Wenyu Huang, Ritwik Mondal, Ben Busby, Nathan D. Olson, Fritz J. Sedlazeck, Justin Wagner, Sina Majidian, Justin M. Zook

    Julkaistu 2024
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  17. 17
    Comparing Variant Call Files for Performance Benchmarking of Next-Generation Sequencing Variant Calling Pipelines

    Comparing Variant Call Files for Performance Benchmarking of Next-Generation Sequencing Variant Calling Pipelines Tekijä John G. Cleary, Ross Braithwaite, Kurt Gaastra, Brian S. Hilbush, Stuart J. Inglis, Sean A. Irvine, Alan A. Jackson, Richard Littin, Mehul Rathod, David Ware, Justin M. Zook, Len Trigg, Francisco M. De La Vega

    Julkaistu 2015
    Hae kokoteksti
    Pré-impressão
    Lisää suosikkeihin
    Tallennettuna:
  18. 18
    An open resource for accurately benchmarking small variant and reference calls

    An open resource for accurately benchmarking small variant and reference calls Tekijä Justin M. Zook, Jennifer McDaniel, Nathan D. Olson, Justin Wagner, Hemang Parikh, Haynes Heaton, Sean A. Irvine, Len Trigg, Rebecca Truty, Cory Y. McLean, Francisco M. De La Vega, Chunlin Xiao, Stephen T. Sherry, Marc Salit

    Julkaistu 2019
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  19. 19
    Best practices for benchmarking germline small-variant calls in human genomes

    Best practices for benchmarking germline small-variant calls in human genomes Tekijä Peter Krusche, Len Trigg, Paul C. Boutros, Christopher E. Mason, Francisco M. De La Vega, Benjamin L. Moore, Mar González-Porta, Michael A. Eberle, Živana Težak, Samir Lababidi, Rebecca Truty, George Asimenos, Birgit Funke, Mark Fleharty, Brad Chapman, Marc Salit, Justin M. Zook

    Julkaistu 2019
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:
  20. 20
    Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

    Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies Tekijä Ann M. Mc Cartney, Kishwar Shafin, Michael Alonge, Andrey V. Bzikadze, Giulio Formenti, Arkarachai Fungtammasan, Kerstin Howe, Chirag Jain, Sergey Koren, Glennis A. Logsdon, Karen H. Miga, Alla Mikheenko, Benedict Paten, Alaina Shumate, Daniela C. Soto, Ivan Sović, Jonathan Wood, Justin M. Zook, Adam M. Phillippy, Arang Rhie

    Julkaistu 2022
    Hae kokoteksti
    Artigo
    Lisää suosikkeihin
    Tallennettuna:

Työkalut: