Rezultati - Jorge Roel‐Touris

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  1. 1
    The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions

    The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions od Brian Jiménez‐García, Jorge Roel‐Touris, Didier Barradas‐Bautista

    Izdano 2023
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  2. 2
    MARTINI-Based Protein-DNA Coarse-Grained HADDOCKing

    MARTINI-Based Protein-DNA Coarse-Grained HADDOCKing od Rodrigo V. Honorato, Jorge Roel‐Touris, Alexandre M. J. J. Bonvin

    Izdano 2019
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  3. 3
    Integrative modeling of membrane-associated protein assemblies

    Integrative modeling of membrane-associated protein assemblies od Jorge Roel‐Touris, Brian Jiménez‐García, Alexandre M. J. J. Bonvin

    Izdano 2020
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  4. 4
    Finding the ΔΔ<i>G</i> spot: Are predictors of binding affinity changes upon mutations in protein–protein interactions ready for it?

    Finding the ΔΔ<i>G</i> spot: Are predictors of binding affinity changes upon mutations in protein–protein interactions ready for it? od Cunliang Geng, Li C. Xue, Jorge Roel‐Touris, Alexandre M. J. J. Bonvin

    Izdano 2019
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  5. 5
    Modeling Antibody-Antigen Complexes by Information-Driven Docking

    Modeling Antibody-Antigen Complexes by Information-Driven Docking od Francesco Ambrosetti, Brian Jiménez‐García, Jorge Roel‐Touris, Alexandre M. J. J. Bonvin

    Izdano 2019
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  6. 6
    The gutSMASH web server: automated identification of primary metabolic gene clusters from the gut microbiota

    The gutSMASH web server: automated identification of primary metabolic gene clusters from the gut microbiota od Victòria Andreu, Jorge Roel‐Touris, Dylan Dodd, Michael A. Fischbach, Marnix H. Medema

    Izdano 2021
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  7. 7
    Less Is More: Coarse-Grained Integrative Modeling of Large Biomolecular Assemblies with HADDOCK

    Less Is More: Coarse-Grained Integrative Modeling of Large Biomolecular Assemblies with HADDOCK od Jorge Roel‐Touris, Charleen G. Don, Rodrigo V. Honorato, João Rodrigues, Alexandre M. J. J. Bonvin

    Izdano 2019
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  8. 8
    LightDock: a new multi-scale approach to protein–protein docking

    LightDock: a new multi-scale approach to protein–protein docking od Brian Jiménez‐García, Jorge Roel‐Touris, Miguel Romero‐Durana, Miquel Vidal, Daniel Jiménez-González, Juan Fernández‐Recio

    Izdano 2017
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  9. 9
    De novo design of immunoglobulin-like domains

    De novo design of immunoglobulin-like domains od Tamuka M. Chidyausiku, Soraia R. Mendes, Jason C. Klima, Marta Nadal, Ulrich Eckhard, Jorge Roel‐Touris, Scott Houliston, Tibisay Guevara, Hugh K. Haddox, Adam Moyer, C.H. Arrowsmith, F. Xavier Gomis‐Rüth, David Baker, Enrique Marcos

    Izdano 2022
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  10. 10
    Impact of <scp>AlphaFold</scp> on structure prediction of protein complexes: The <scp>CASP15‐CAPRI</scp> experiment

    Impact of <scp>AlphaFold</scp> on structure prediction of protein complexes: The <scp>CASP15‐CAPRI</scp> experiment od Marc F. Lensink, Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato, Charlotte van Noort, João M. C. Teixeira, Alexandre M. J. J. Bonvin, Ren Kong, Hang Shi, Xufeng Lu, Shan Chang, Jian Liu, Zhiye Guo, Xiao Chen, Alex Morehead, Raj S. Roy, Tianqi Wu, Nabin Giri, Farhan Quadir, Chen Chen, Jianlin Cheng, Carlos A. Del Carpio, Eichiro Ichiishi, Luis Ángel Rodríguez-Lumbreras, Juan Fernández‐Recio, Ameya Harmalkar, Lee‐Shin Chu, Samuel W. Canner, Rituparna Smanta, Jeffrey J. Gray, Hao Li, Peicong Lin, Jiahua He, Huanyu Tao, Sheng‐You Huang, Jorge Roel‐Touris, Brian Jiménez‐García, Charles Christoffer, Anika Jain, Yuki Kagaya, Harini Kannan, Tsukasa Nakamura, Genki Terashi, Jacob Verburgt, Yuanyuan Zhang, Zicong Zhang, Hayato Fujuta, Masakazu Sekijima, Daisuke Kihara, Omeir Khan, Sergei Kotelnikov, Usman Ghani, Dzmitry Padhorny, Dmitri Beglov, Sándor Vajda, Dima Kozakov, Surendra S. Negi, Tiziana Ricciardelli, Didier Barradas‐Bautista, Zhen Cao, Mohit Chawla, Luigi Cavallo, Romina Oliva, Rui Yin, Melyssa Cheung, Johnathan D. Guest, Jessica Lee, Brian G. Pierce, Ben Shor, Tomer Cohen, Matan Halfon, Dina Schneidman‐Duhovny, Shaowen Zhu, Rujie Yin, Yuanfei Sun, Yang Shen, Martyna Maszota‐Zieleniak, Krzysztof K. Bojarski, Emilia A. Lubecka, Mateusz Marcisz, Annemarie Danielsson, Łukasz Dziadek, Margrethe Gaardløs, Artur Giełdoń, Adam Liwo, Sergey A. Samsonov, Rafał Ślusarz, Karolina Zięba, Adam K. Sieradzan, Cezary Czaplewski, Shinpei Kobayashi, Yuta Miyakawa, Yasuomi Kiyota, Mayuko Takeda‐Shitaka, Kliment Olechnovič, Lukas Valančauskas, Justas Dapkūnas, Česlovas Venclovas

    Izdano 2023
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  11. 11
    Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment

    Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment od Marc F. Lensink, Guillaume Brysbaert, Nurul Nadzirin, Sameer Velankar, Raphaël A. G. Chaleil, Tereza Gerguri, Paul A. Bates, Élodie Laine, Alessandra Carbone, Sergei Grudinin, Ren Kong, Ran‐Ran Liu, Ximing Xu, Hang Shi, Shan Chang, Miriam Eisenstein, Agnieszka Karczyńska, Cezary Czaplewski, Emilia A. Lubecka, Agnieszka G. Lipska, Paweł Krupa, Magdalena A. Mozolewska, Łukasz Golon, Sergey A. Samsonov, Adam Liwo, Silvia Crivelli, Guillaume Pagès, Mikhail Karasikov, Maria Kadukova, Yumeng Yan, Sheng‐You Huang, Mireia Rosell, Luis Ángel Rodríguez-Lumbreras, Miguel Romero‐Durana, Lucía Díaz, Juan Fernández‐Recio, Charles Christoffer, Genki Terashi, Woong‐Hee Shin, Tunde Aderinwale, Sai Raghavendra Maddhuri Venkata Subraman, Daisuke Kihara, Dima Kozakov, Sándor Vajda, Kathryn Porter, Dzmitry Padhorny, Israel Desta, Dmitri Beglov, Mikhail Ignatov, Sergey Kotelnikov, Iain H. Moal, David W. Ritchie, Isaure Chauvot de Beauchêne, Bernard Maigret, Marie‐Dominique Devignes, Maria Elisa Ruiz Echartea, Didier Barradas‐Bautista, Zhen Cao, Luigi Cavallo, Romina Oliva, Yue Cao, Yang Shen, Minkyung Baek, Taeyong Park, Hyeonuk Woo, Chaok Seok, Merav Braitbard, Lirane Bitton, Dina Scheidman‐Duhovny, Justas Dapkūnas, Kliment Olechnovič, Česlovas Venclovas, Petras J. Kundrotas, Saveliy Belkin, Devlina Chakravarty, Varsha D. Badal, Ilya A. Vakser, Thom Vreven, Sweta Vangaveti, Tyler Borrman, Zhiping Weng, Johnathan D. Guest, Ragul Gowthaman, Brian G. Pierce, Xianjin Xu, Rui Duan, Liming Qiu, Jie Hou, Benjamin Ryan Merideth, Zhiwei Ma, Jianlin Cheng, Xiaoqin Zou, Panagiotis I. Koukos, Jorge Roel‐Touris, Francesco Ambrosetti, Cunliang Geng, Jörg Schaarschmidt, Mikaël Trellet, Adrien S. J. Melquiond, Li C. Xue

    Izdano 2019
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  12. 12
    Prediction of protein assemblies, the next frontier: The <scp>CASP14‐CAPRI</scp> experiment

    Prediction of protein assemblies, the next frontier: The <scp>CASP14‐CAPRI</scp> experiment od Marc F. Lensink, Guillaume Brysbaert, Théo Mauri, Nurul Nadzirin, Sameer Velankar, Raphaël A. G. Chaleil, Tereza Clarence, Paul A. Bates, Ren Kong, Bin Liu, Guangbo Yang, Ming Liu, Hang Shi, Xufeng Lu, Shan Chang, Raj S. Roy, Farhan Quadir, Jian Liu, Jianlin Cheng, Anna Antoniak, Cezary Czaplewski, Artur Giełdoń, Mateusz Kogut, Agnieszka G. Lipska, Adam Liwo, Emilia A. Lubecka, Martyna Maszota‐Zieleniak, Adam K. Sieradzan, Rafał Ślusarz, Patryk A. Wesołowski, Karolina Zięba, Carlos Adriel Del Carpio Munoz, Eiichiro Ichiishi, Ameya Harmalkar, Jeffrey J. Gray, Alexandre M. J. J. Bonvin, Francesco Ambrosetti, Rodrigo V. Honorato, Zuzana Jandová, Brian Jiménez‐García, Panagiotis I. Koukos, Siri van Keulen, Charlotte W. van Noort, Manon Réau, Jorge Roel‐Touris, Sergei Kotelnikov, Dzmitry Padhorny, Kathryn A. Porter, Andrey Alekseenko, Mikhail Ignatov, Israel Desta, Ryota Ashizawa, Zhuyezi Sun, Usman Ghani, Nasser Hashemi, Sándor Vajda, Dima Kozakov, Mireia Rosell, Luis Ángel Rodríguez-Lumbreras, Juan Fernández‐Recio, Agnieszka Karczyńska, Sergei Grudinin, Yumeng Yan, Hao Li, Peicong Lin, Sheng‐You Huang, Charles Christoffer, Genki Terashi, Jacob Verburgt, Daipayan Sarkar, Tunde Aderinwale, Xiao Wang, Daisuke Kihara, Tsukasa Nakamura, Yuya Hanazono, Ragul Gowthaman, Johnathan D. Guest, Rui Yin, Ghazaleh Taherzadeh, Brian G. Pierce, Didier Barradas‐Bautista, Zhen Cao, Luigi Cavallo, Romina Oliva, Yuanfei Sun, Shaowen Zhu, Yang Shen, Taeyong Park, Hyeonuk Woo, Jinsol Yang, Sohee Kwon, Jonghun Won, Chaok Seok, Yasuomi Kiyota, Shinpei Kobayashi, Yoshiki Harada, Mayuko Takeda‐Shitaka, Petras J. Kundrotas, Amar Singh, Ilya A. Vakser

    Izdano 2021
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