Search Results - Jason Greenbaum

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  1. 1
    Construction of a genome-scale structural map at single-nucleotide resolution

    Construction of a genome-scale structural map at single-nucleotide resolution by Jason Greenbaum, Bo Pang, Thomas D. Tullius

    Published 2007
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  2. 2
    Meta-analysis of All Immune Epitope Data in the<i>Flavivirus</i>Genus: Inventory of Current Immune Epitope Data Status in the Context of Virus Immunity and Immunopathology

    Meta-analysis of All Immune Epitope Data in the<i>Flavivirus</i>Genus: Inventory of Current Immune Epitope Data Status in the Context of Virus Immunity and Immunopathology by Kerrie Vaughan, Jason Greenbaum, Martin Blythe, Bjoern Peters, Alessandro Sette

    Published 2010
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  3. 3
    Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes

    Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes by Jason Greenbaum, John Sidney, Jolan Chung, Christian Brander, Bjoern Peters, Alessandro Sette

    Published 2011
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  4. 4
    An automated benchmarking platform for MHC class II binding prediction methods

    An automated benchmarking platform for MHC class II binding prediction methods by Massimo Andreatta, Thomas Trolle, Yan Zhen, Jason Greenbaum, Bjoern Peters, Morten Nielsen

    Published 2017
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  5. 5
    A comprehensive analysis of the IEDB MHC class-I automated benchmark

    A comprehensive analysis of the IEDB MHC class-I automated benchmark by Raphael Trevizani, Yan Zhen, Jason Greenbaum, Alessandro Sette, Morten Nielsen, Bjoern Peters

    Published 2022
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  6. 6
    Bcl6 Expressing Follicular Helper CD4 T Cells Are Fate Committed Early and Have the Capacity To Form Memory

    Bcl6 Expressing Follicular Helper CD4 T Cells Are Fate Committed Early and Have the Capacity To Form Memory by Youn Soo Choi, Jessica A. Yang, Isharat Yusuf, Robert J. Johnston, Jason Greenbaum, Bjoern Peters, Shane Crotty

    Published 2013
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  7. 7
    The Immune Epitope Database 2.0

    The Immune Epitope Database 2.0 by Randi Vita, Laura Zarebski, Jason Greenbaum, Hussein Emami, Ilka Hoof, Nima Salimi, Rohini Damle, Alessandro Sette, Bjoern Peters

    Published 2009
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  8. 8
    Automated benchmarking of peptide-MHC class I binding predictions

    Automated benchmarking of peptide-MHC class I binding predictions by Thomas Trolle, Imir G. Metushi, Jason Greenbaum, Yohan Kim, John Sidney, Ole Lund, Alessandro Sette, Bjoern Peters, Morten Nielsen

    Published 2015
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  9. 9
    Improved methods for predicting peptide binding affinity to <scp>MHC</scp> class <scp>II</scp> molecules

    Improved methods for predicting peptide binding affinity to <scp>MHC</scp> class <scp>II</scp> molecules by Kamilla Kjærgaard Jensen, Massimo Andreatta, Paolo Marcatili, Søren Buus, Jason Greenbaum, Yan Zhen, Alessandro Sette, Bjoern Peters, Morten Nielsen

    Published 2018
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  10. 10
    Properties of MHC Class I Presented Peptides That Enhance Immunogenicity

    Properties of MHC Class I Presented Peptides That Enhance Immunogenicity by Jorg J. A. Calis, Matt Maybeno, Jason Greenbaum, Daniela Weiskopf, Aruna Dharshan De Silva, Alessandro Sette, Can Keşmir, Bjoern Peters

    Published 2013
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  11. 11
    Immunological consequences of intragenus conservation of<i>Mycobacterium tuberculosis</i>T-cell epitopes

    Immunological consequences of intragenus conservation of<i>Mycobacterium tuberculosis</i>T-cell epitopes by Cecilia S. Lindestam Arlehamn, Sinu Paul, Federico Mele, Charlie Huang, Jason Greenbaum, Randi Vita, John Sidney, Bjoern Peters, Federica Sallusto, Alessandro Sette

    Published 2014
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  12. 12
    Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population

    Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population by Jason Greenbaum, Maya F. Kotturi, Yohan Kim, Carla Oseroff, Kerrie Vaughan, Nima Salimi, Randi Vita, Julia Ponomarenko, Richard H. Scheuermann, Alessandro Sette, Bjoern Peters

    Published 2009
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  13. 13
    <scp>IEDB‐3D</scp> 2.0: Structural data analysis within the Immune Epitope Database

    <scp>IEDB‐3D</scp> 2.0: Structural data analysis within the Immune Epitope Database by Marcus Fabiano de Almeida Mendes, Jarjapu Mahita, Nina Blazeska, Jason Greenbaum, Brendan Ha, Kelly Wheeler, Jiyao Wang, Deborah A. Shackelford, Alessandro Sette, Bjoern Peters

    Published 2023
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  14. 14
    Transcriptomic Analysis of CD4+ T Cells Reveals Novel Immune Signatures of Latent Tuberculosis

    Transcriptomic Analysis of CD4+ T Cells Reveals Novel Immune Signatures of Latent Tuberculosis by Julie G. Burel, Cecilia S. Lindestam Arlehamn, Nabeela Khan, Grégory Seumois, Jason Greenbaum, Randy Taplitz, Robert H. Gilman, Mayuko Saito, Pandurangan Vijayanand, Alessandro Sette, Bjoern Peters

    Published 2018
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  15. 15
    Immune epitope database analysis resource

    Immune epitope database analysis resource by Young‐Hee Kim, Julia Ponomarenko, Zhenggang Zhu, David Tamang, Peng Wang, Jason Greenbaum, C. Lundegaard, Alessandro Sette, Ole Lund, Philip E. Bourne, Morten Nielsen, Björn Peters

    Published 2012
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  16. 16
    Analysis of T Cell Responses to the Major Allergens from German Cockroach: Epitope Specificity and Relationship to IgE Production

    Analysis of T Cell Responses to the Major Allergens from German Cockroach: Epitope Specificity and Relationship to IgE Production by Carla Oseroff, John Sidney, Victoria Tripple, Howard M. Grey, Robert A. Wood, David H. Broide, Jason Greenbaum, Ravi V. Kolla, Bjoern Peters, Anna Pomés, Alessandro Sette

    Published 2012
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  17. 17
    T-cell epitope conservation across allergen species is a major determinant of immunogenicity

    T-cell epitope conservation across allergen species is a major determinant of immunogenicity by Luise Westernberg, Véronique Schulten, Jason Greenbaum, Sara Natali, Victoria Tripple, Denise M. McKinney, April Frazier, Heidi Hofer, Michael Wallner, Federica Sallusto, Alessandro Sette, Bjoern Peters

    Published 2016
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  18. 18
    Predicting T cell recognition of MHC class I restricted neoepitopes

    Predicting T cell recognition of MHC class I restricted neoepitopes by Zeynep Koşaloğlu, Manasa Lanka, Angela Frentzen, Ashmitaa Logandha Ramamoorthy Premlal, John Sidney, Kerrie Vaughan, Jason Greenbaum, Paul F. Robbins, Jared J. Gartner, Alessandro Sette, Bjoern Peters

    Published 2018
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  19. 19
    The immune epitope database (IEDB) 3.0

    The immune epitope database (IEDB) 3.0 by Randi Vita, James A. Overton, Jason Greenbaum, Julia Ponomarenko, Jason D. Clark, Jason R Cantrell, Daniel K Wheeler, Joseph L. Gabbard, Deborah Hix, Alessandro Sette, Bjoern Peters

    Published 2014
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  20. 20
    Dengue Virus Evolution under a Host-Targeted Antiviral

    Dengue Virus Evolution under a Host-Targeted Antiviral by Emily M. Plummer, Michael D. Buck, Marisa Sanchez, Jason Greenbaum, Julia Turner, Rajvir Grewal, Brennan Klose, Aruna Sampath, Kelly L. Warfield, Bjoern Peters, Urban Ramstedt, Sujan Shresta

    Published 2015
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