検索結果 - Jared T. Simpson

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  1. 1
    Exploring genome characteristics and sequence quality without a reference

    Exploring genome characteristics and sequence quality without a reference 著者: Jared T. Simpson

    出版事項 2014
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    Artigo
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  2. 2
    The Theory and Practice of Genome Sequence Assembly

    The Theory and Practice of Genome Sequence Assembly 著者: Jared T. Simpson, Mihai Pop

    出版事項 2015
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  3. 3
    Efficient de novo assembly of large genomes using compressed data structures

    Efficient de novo assembly of large genomes using compressed data structures 著者: Jared T. Simpson, Richard Durbin

    出版事項 2011
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    Artigo
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  4. 4
    Efficient construction of an assembly string graph using the FM-index

    Efficient construction of an assembly string graph using the FM-index 著者: Jared T. Simpson, Richard Durbin

    出版事項 2010
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    Artigo
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  5. 5
    A complete bacterial genome assembled de novo using only nanopore sequencing data

    A complete bacterial genome assembled de novo using only nanopore sequencing data 著者: Nicholas J. Loman, Joshua Quick, Jared T. Simpson

    出版事項 2015
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  6. 6
    On the Representation of de Bruijn Graphs

    On the Representation of de Bruijn Graphs 著者: Rayan Chikhi, Antoine Limasset, Shaun D. Jackman, Jared T. Simpson, Paul Medvedev

    出版事項 2014
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  7. 7
    On the Representation of De Bruijn Graphs

    On the Representation of De Bruijn Graphs 著者: Rayan Chikhi, Antoine Limasset, Shaun D. Jackman, Jared T. Simpson, Paul Medvedev

    出版事項 2015
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    Artigo
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  8. 8
    New Twists in Detecting mRNA Modification Dynamics

    New Twists in Detecting mRNA Modification Dynamics 著者: Ina Anreiter, Quoseena Mir, Jared T. Simpson, Sarath Chandra Janga, Matthias Soller

    出版事項 2020
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  9. 9
    Nanocall: an open source basecaller for Oxford Nanopore sequencing data

    Nanocall: an open source basecaller for Oxford Nanopore sequencing data 著者: Matei David, Lewis Jonathan Dursi, Delia Yao, Paul C. Boutros, Jared T. Simpson

    出版事項 2016
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    Artigo
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  10. 10
    Detecting DNA cytosine methylation using nanopore sequencing

    Detecting DNA cytosine methylation using nanopore sequencing 著者: Jared T. Simpson, Rachael E. Workman, Philip C. Zuzarte, Matei David, Lewis Jonathan Dursi, Winston Timp

    出版事項 2017
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  11. 11
    Revealing nascent RNA processing dynamics with nano-COP

    Revealing nascent RNA processing dynamics with nano-COP 著者: Heather L. Drexler, Karine Choquet, Hope E. Merens, Paul S. Tang, Jared T. Simpson, L. Stirling Churchman

    出版事項 2021
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  12. 12
    ABySS: A parallel assembler for short read sequence data

    ABySS: A parallel assembler for short read sequence data 著者: Jared T. Simpson, Kim Wong, Shaun D. Jackman, Jacqueline E. Schein, Steven J.M. Jones, İnanç Birol

    出版事項 2009
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  13. 13
    GPU accelerated adaptive banded event alignment for rapid comparative nanopore signal analysis

    GPU accelerated adaptive banded event alignment for rapid comparative nanopore signal analysis 著者: Hasindu Gamaarachchi, Chun Wai Lam, Gihan Jayatilaka, Hiruna Samarakoon, Jared T. Simpson, Martin A. Smith, Sri Parameswaran

    出版事項 2020
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  14. 14
    Capturing the dynamics of genome replication on individual ultra-long nanopore sequence reads

    Capturing the dynamics of genome replication on individual ultra-long nanopore sequence reads 著者: Carolin A. Müller, Michael A. Boemo, Paolo Spingardi, Benedikt M. Kessler, Skirmantas Kriaučionis, Jared T. Simpson, Conrad A. Nieduszynski

    出版事項 2019
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  15. 15
    Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing

    Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing 著者: Isac Lee, Roham Razaghi, Timothy Gilpatrick, Michael M. Molnar, Ariel Gershman, Norah Sadowski, Fritz J. Sedlazeck, Kasper D. Hansen, Jared T. Simpson, Winston Timp

    出版事項 2020
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  16. 16
    A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes

    A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes 著者: Anders Bergström, Jared T. Simpson, F. Salinas, Benjamin Barré, Leopold Parts, Amin Zia, Alex N. Nguyen Ba, Alan M Moses, Edward J. Louis, Ville Mustonen, Jonas Warringer, Richard Durbin, Gianni Liti

    出版事項 2014
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  17. 17
    Trait Variation in Yeast Is Defined by Population History

    Trait Variation in Yeast Is Defined by Population History 著者: Jonas Warringer, Enikö Zörgö, Francisco A. Cubillos, Amin Zia, Arne B. Gjuvsland, Jared T. Simpson, Annabelle Forsmark, Richard Durbin, Stig W. Omholt, Edward J. Louis, Gianni Liti, Alan M Moses, Anders Blomberg

    出版事項 2011
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  18. 18
    Revealing the genetic structure of a trait by sequencing a population under selection

    Revealing the genetic structure of a trait by sequencing a population under selection 著者: Leopold Parts, Francisco A. Cubillos, Jonas Warringer, Kanika Jain, F. Salinas, Suzannah J. Bumpstead, Mikael Molin, Amin Zia, Jared T. Simpson, Michael A. Quail, Alan M Moses, Edward J. Louis, Richard Durbin, Gianni Liti

    出版事項 2011
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  19. 19
    Candidate Cancer Driver Mutations in Distal Regulatory Elements and Long-Range Chromatin Interaction Networks

    Candidate Cancer Driver Mutations in Distal Regulatory Elements and Long-Range Chromatin Interaction Networks 著者: Helen Zhu, Liis Uusküla-Reimand, Keren Isaev, Lina Wadi, Azad Alizada, Shimin Shuai, Vincent Huang, Dike Aduluso-Nwaobasi, Marta Paczkowska, Diala Abd-Rabbo, Oliver Ocsenas, Minggao Liang, John Thompson, Yao Li, Luyao Ruan, Michał Krassowski, Irakli Dzneladze, Jared T. Simpson, Mathieu Lupien, Lincoln Stein, Paul C. Boutros, Michael D. Wilson, Jüri Reimand

    出版事項 2020
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  20. 20
    Nanopore native RNA sequencing of a human poly(A) transcriptome

    Nanopore native RNA sequencing of a human poly(A) transcriptome 著者: Rachael E. Workman, Alison D. Tang, Paul S. Tang, Miten Jain, John R. Tyson, Philip C. Zuzarte, Timothy Gilpatrick, Roham Razaghi, Joshua Quick, Norah Sadowski, Nadine Holmes, Jaqueline Góes de Jesus, Karen L. Jones, Terrance P. Snutch, Nicholas J. Loman, Benedict Paten, Matthew Loose, Jared T. Simpson, Hugh E. Olsen, Angela N. Brooks, Mark Akeson, Winston Timp

    出版事項 2018
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