Search Results - Jan‐Philipp Mallm

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  1. 1
    Approaches for single-cell RNA sequencing across tissues and cell types

    Approaches for single-cell RNA sequencing across tissues and cell types by Pooja Sant, Karsten Rippe, Jan‐Philipp Mallm

    Published 2023
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  2. 2
    Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development

    Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development by Vladimir B. Teif, Daria A. Beshnova, Yevhen Vainshtein, Caroline Marth, Jan‐Philipp Mallm, Thomas Höfer, Karsten Rippe

    Published 2014
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  3. 3
    Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming

    Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming by Llorenç Solé‐Boldo, Günter Raddatz, Sabrina Schütz, Jan‐Philipp Mallm, Karsten Rippe, Anke S. Lonsdorf, Manuel Rodríguez‐Paredes, Frank Lyko

    Published 2020
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  4. 4
    The spatial zonation of the murine placental vasculature is specified by epigenetic mechanisms

    The spatial zonation of the murine placental vasculature is specified by epigenetic mechanisms by Stephanie Gehrs, Moritz Jakab, Ewgenija Gutjahr, Zuguang Gu, Dieter Weichenhan, Jan‐Philipp Mallm, Carolin Mogler, Matthias Schlesner, Christoph Plass, Katharina Schlereth, Hellmut G. Augustin

    Published 2025
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  5. 5
    HP1 Is Involved in Regulating the Global Impact of DNA Methylation on Alternative Splicing

    HP1 Is Involved in Regulating the Global Impact of DNA Methylation on Alternative Splicing by Ahuvi Yearim, Sahar Gelfman, Ronna Shayevitch, Shai Melcer, Ohad Glaich, Jan‐Philipp Mallm, Malka Nissim‐Rafinia, Ayelet-Hashahar S. Cohen, Karsten Rippe, Eran Meshorer, Gil Ast

    Published 2015
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  6. 6
    Specificity, propagation, and memory of pericentric heterochromatin

    Specificity, propagation, and memory of pericentric heterochromatin by Katharina Müller‐Ott, Fabian Erdel, Anna Matveeva, Jan‐Philipp Mallm, Anne Rademacher, Matthias Hahn, Caroline Bauer, Qin Zhang, Sabine Kaltofen, Gunnar Schotta, Thomas Höfer, Karsten Rippe

    Published 2014
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  7. 7
    Comparison of spatial transcriptomics technologies using tumor cryosections

    Comparison of spatial transcriptomics technologies using tumor cryosections by Anne Rademacher, Alik Huseynov, Michele Bortolomeazzi, Sina Jasmin Wille, Sabrina Schumacher, Pooja Sant, Denise Keitel, Konstantin Okonechnikov, David R. Ghasemi, Kristian W. Pajtler, Jan‐Philipp Mallm, Karsten Rippe

    Published 2024
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  8. 8
    Heterochromatin Protein 1β (HP1β) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells

    Heterochromatin Protein 1β (HP1β) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells by Anna Mattout, Yair Aaronson, Badi Sri Sailaja, Raghu Ram Edupuganti, Arigela Harikumar, Jan‐Philipp Mallm, Kae Hwan Sim, Malka Nissim‐Rafinia, Emmanuelle Supper, Prim B. Singh, Siu Kwan Sze, Susan M. Gasser, Karsten Rippe, Eran Meshorer

    Published 2015
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  9. 9
    Suv4-20h2 mediates chromatin compaction and is important for cohesin recruitment to heterochromatin

    Suv4-20h2 mediates chromatin compaction and is important for cohesin recruitment to heterochromatin by Matthias Hahn, Silvia Dambacher, Stanimir Dulev, Anastasia Y Kuznetsova, Simon Eck, Stefan Wörz, Dennis Sadic, Maike Schulte, Jan‐Philipp Mallm, Andreas Maiser, Pierre Debs, Harald von Melchner, Heinrich Leonhardt, Lothar Schermelleh, Karl Rohr, Karsten Rippe, Zuzana Štorchová, Gunnar Schotta

    Published 2013
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  10. 10
    Genome-wide DNA-methylation landscape defines specialization of regulatory T cells in tissues

    Genome-wide DNA-methylation landscape defines specialization of regulatory T cells in tissues by Michael Delacher, Charles D. Imbusch, Dieter Weichenhan, Achim Breiling, Agnes Hotz‐Wagenblatt, Ulrike Träger, Ann-Cathrin Hofer, Danny Kägebein, Qi Wang, Felix Frauhammer, Jan‐Philipp Mallm, Katharina Bauer, Carl Herrmann, Philipp A. Lang, Benedikt Brors, Christoph Plass, Markus Feuerer

    Published 2017
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  11. 11
    Haematopoietic stem cells in perisinusoidal niches are protected from ageing

    Haematopoietic stem cells in perisinusoidal niches are protected from ageing by Mehmet Saçma, Johannes Pospiech, Ruzhica Bogeska, Walter de Back, Jan‐Philipp Mallm, Vadim Sakk, Karin Soller, Gina Marka, Angelika Vollmer, Rebekah Karns, Nina Cabezas‐Wallscheid, Andreas Trumpp, Simón Méndez‐Ferrer, Michael D. Milsom, Medhanie Mulaw, Hartmut Geiger, Maria Carolina Florian

    Published 2019
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  12. 12
    A multidimensional atlas of human glioblastoma-like organoids reveals highly coordinated molecular networks and effective drugs

    A multidimensional atlas of human glioblastoma-like organoids reveals highly coordinated molecular networks and effective drugs by Changwen Wang, Meng Sun, Chunxuan Shao, Lisa Schlicker, Yue Zhuo, Yassin Harim, Tianping Peng, Weili Tian, Nadja Stöffler, Martin Schneider, Dominic Helm, Youjun Chu, Beibei Fu, Xiaoliang Jin, Jan‐Philipp Mallm, Moritz Mall, Yonghe Wu, Almut Schulze, Hai‐Kun Liu

    Published 2024
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  13. 13
    Subclone-specific microenvironmental impact and drug response in refractory multiple myeloma revealed by single‐cell transcriptomics

    Subclone-specific microenvironmental impact and drug response in refractory multiple myeloma revealed by single‐cell transcriptomics by Stephan M. Tirier, Jan‐Philipp Mallm, Simon Steiger, Alexandra M. Poos, Mohamed H.S. Awwad, Nicola Giesen, Nicola Casiraghi, Hana Sušak, Katharina Bauer, Anja Baumann, Lukas John, Anja Seckinger, Dirk Hose, Carsten Müller‐Tidow, Hartmut Goldschmidt, Oliver Stegle, Michael Hundemer, Niels Weinhold, Marc S. Raab, Karsten Rippe

    Published 2021
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  14. 14
    Increased vitamin D levels at birth and in early infancy increase offspring allergy risk—evidence for involvement of epigenetic mechanisms

    Increased vitamin D levels at birth and in early infancy increase offspring allergy risk—evidence for involvement of epigenetic mechanisms by Kristin M. Junge, Tobias Bauer, Stefanie Geißler, Frank Hirche, Loreen Thürmann, Mario Bauer, Saskia Trump, Matthias Bieg, Dieter Weichenhan, Lei Gu, Jan‐Philipp Mallm, Naveed Ishaque, Oliver Mücke, Stefan Röder, Gunda Herberth, Ulrike Diez, Michael Borte, Karsten Rippe, Christoph Plass, Carl Hermann, Gabriele I. Stangl, Roland Eils, Irina Lehmann

    Published 2015
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  15. 15
    HMGB2 Loss upon Senescence Entry Disrupts Genomic Organization and Induces CTCF Clustering across Cell Types

    HMGB2 Loss upon Senescence Entry Disrupts Genomic Organization and Induces CTCF Clustering across Cell Types by Anne Zirkel, Miloš Nikolić, Konstantinos Sofiadis, Jan‐Philipp Mallm, Chris A. Brackley, Henrike Johanna Gothe, Oliver Drechsel, Christian Becker, Janine Altmüller, Nataša Josipović, Theodore Georgomanolis, Lilija Brant, Julia Franzen, Mirjam Koker, Eduardo Gade Gusmao, Ivan G. Costa, Roland T. Ullrich, Wolfgang Wagner, Vassilis Roukos, Peter Nürnberg, Davide Marenduzzo, Karsten Rippe, Argyris Papantonis

    Published 2018
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  16. 16
    Quiescence Modulates Stem Cell Maintenance and Regenerative Capacity in the Aging Brain

    Quiescence Modulates Stem Cell Maintenance and Regenerative Capacity in the Aging Brain by Georgios Kalamakis, Daniel Brüne, Srikanth Ravichandran, J. Bolz, Wenqiang Fan, Frederik Ziebell, Thomas Stiehl, Francisco Catalá-Martinez, Janina Kupke, Sheng Zhao, Enric Llorens-Bobadilla, Katharina Bauer, Stefanie Limpert, Birgit S. Berger, Urs Christen, Peter Schmezer, Jan‐Philipp Mallm, Benedikt Berninger, Simon Anders, Antonio del Sol, Anna Marciniak‐Czochra, Ana Martín-Villalba

    Published 2019
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  17. 17
    Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks

    Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks by Jan‐Philipp Mallm, Murat Iskar, Naveed Ishaque, Lara C. Klett, Sabrina J. Kugler, José M. Muiño, Vladimir B. Teif, Alexandra M. Poos, Sebastian Großmann, Fabian Erdel, Daniele Tavernari, Sandra D. Koser, Sabrina Schumacher, Benedikt Brors, Rainer König, Daniel Remondini, Martin Vingron, Stephan Stilgenbauer, Peter Lichter, Marc Zapatka, Daniel Mertens, Karsten Rippe

    Published 2019
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  18. 18
    Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor BATF

    Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor BATF by Michael Delacher, Charles D. Imbusch, Agnes Hotz‐Wagenblatt, Jan‐Philipp Mallm, Katharina Bauer, Malte Simon, Dania Riegel, André F. Rendeiro, Sebastian Bittner, Lieke Sanderink, Asmita Pant, Lisa Schmidleithner, Kathrin Luise Braband, Bernd Echtenachter, Alexander Fischer, Valentina Giunchiglia, Petra Hoffmann, Matthias Edinger, Christoph Bock, Michael Rehli, Benedikt Brors, Christian Schmidl, Markus Feuerer

    Published 2020
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  19. 19
    Resolving therapy resistance mechanisms in multiple myeloma by multiomics subclone analysis

    Resolving therapy resistance mechanisms in multiple myeloma by multiomics subclone analysis by Alexandra M. Poos, Nina Prokoph, Moritz J. Przybilla, Jan‐Philipp Mallm, Simon Steiger, Isabelle Seufert, Lukas John, Stephan M. Tirier, Katharina Bauer, Anja Baumann, Jennifer Rohleder, Umair Munawar, Leo Rasche, K. Martin Kortüm, Nicola Giesen, Philipp Reichert, Stefanie Huhn, Carsten Müller‐Tidow, Hartmut Goldschmidt, Oliver Stegle, Marc S. Raab, Karsten Rippe, Niels Weinhold

    Published 2023
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  20. 20
    Compartments in medulloblastoma with extensive nodularity are connected through differentiation along the granular precursor lineage

    Compartments in medulloblastoma with extensive nodularity are connected through differentiation along the granular precursor lineage by David R. Ghasemi, Konstantin Okonechnikov, Anne Rademacher, Stephan M. Tirier, Kendra K. Maaß, Hanna Schumacher, Piyush Joshi, Maxwell P. Gold, Julia Sundheimer, Britta Statz, Ahmet Süreyya Rifaioğlu, Katharina Bauer, Sabrina Schumacher, Michele Bortolomeazzi, Felice Giangaspero, Kati Ernst, Steven C. Clifford, Julio Sáez-Rodríguez, David Jones, Daisuke Kawauchi, Ernest Fraenkel, Jan‐Philipp Mallm, Karsten Rippe, Andrey Korshunov, Stefan M. Pfister, Kristian W. Pajtler

    Published 2024
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