Rezultati - James Lindsay

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  1. 1
    Feature selection and classifier performance on diverse bio- logical datasets

    Feature selection and classifier performance on diverse bio- logical datasets od Edward Hemphill, James Lindsay, Chih Lee, Ion Măndoiu, Craig E. Nelson

    Izdano 2014
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  2. 2
    Inhibition of carboplatin-induced DNA interstrand crosslink repair by gemcitabine in patients receiving these drugs for ‘platinum-resistant’ ovarian cancer

    Inhibition of carboplatin-induced DNA interstrand crosslink repair by gemcitabine in patients receiving these drugs for ‘platinum-resistant’ ovarian cancer od Ledermann, Jonathan A, Gabra, Hani, Jayson, Gordon C, Spanswick, Victoria J, Rustin, Gordon JS, Jitlal, Mark, James, Lindsay E, Hartley, John A

    Izdano 2010
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  3. 3
    Clinical Trial Notifications Triggered by Artificial Intelligence–Detected Cancer Progression

    Clinical Trial Notifications Triggered by Artificial Intelligence–Detected Cancer Progression od Tali Mazor, Karim S. Farhat, Pavel Trukhanov, James Lindsay, Matthew Galvin, Emily Mallaber, Paul Morgan, Michael J. Hassett, Deborah Schrag, Ethan Cerami, Kenneth L. Kehl

    Izdano 2025
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  4. 4
    Evolution of coding and non-coding genes in HOX clusters of a marsupial

    Evolution of coding and non-coding genes in HOX clusters of a marsupial od Hongshi Yu, James Lindsay, Zhiping Feng, Stephen Frankenberg, Yanqiu Hu, Dawn M. Carone, Geoff Shaw, Andrew J. Pask, Rachel J. O’Neill, Anthony T. Papenfuss, Marilyn B. Renfree

    Izdano 2012
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  5. 5
    Low peripheral blood derived neutrophil-to-lymphocyte ratio (dNLR) is associated with increased tumor T-cell infiltration and favorable outcomes to first-line pembrolizumab in non-small cell lung cancer

    Low peripheral blood derived neutrophil-to-lymphocyte ratio (dNLR) is associated with increased tumor T-cell infiltration and favorable outcomes to first-line pembrolizumab in non-... od Joao V. Alessi, Biagio Ricciuti, Stephanie Alden, Arrien A. Bertram, W. Marston Linehan, Mustafa Sakhi, Mizuki Nishino, Victor R. Vaz, James Lindsay, Madison Turner, Kathleen L. Pfaff, Bijaya Sharma, Kristen D. Felt, Scott J. Rodig, Justin F. Gainor, Mark M. Awad

    Izdano 2021
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  6. 6
    AACR Project GENIE: 100,000 Cases and Beyond

    AACR Project GENIE: 100,000 Cases and Beyond od Trevor J. Pugh, Jonathan L. Bell, Jeffrey P. Bruce, Gary J. Doherty, Matthew Galvin, Michelle Green, Haley Hunter-Zinck, Priti Kumari, Michele L. Lenoue-Newton, Marilyn M. Li, James Lindsay, Tali Mazor, Andrea Ovalle, Stephen‐John Sammut, Nikolaus Schultz, Thomas Yu, Shawn M. Sweeney, Brady Bernard

    Izdano 2022
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  7. 7
    MatchMiner: an open-source platform for cancer precision medicine

    MatchMiner: an open-source platform for cancer precision medicine od Harry Klein, Tali Mazor, Ethan Siegel, Pavel Trukhanov, Andrea Ovalle, Catherine Del Vecchio Fitz, Zachary Zwiesler, Priti Kumari, Bernd Van Der Veen, Eric Marriott, Jason Hansel, Joyce E. Yu, Adem Albayrak, Susan Barry, Rachel B. Keller, Laura E. MacConaill, Neal I. Lindeman, Bruce E. Johnson, Barrett J. Rollins, T. Khanh, Brian Beardslee, Geoffrey I. Shapiro, Suzanne Hector-Barry, John Methot, Lynette M. Sholl, James Lindsay, Michael J. Hassett, Ethan Cerami

    Izdano 2022
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  8. 8
    Dissecting the clinicopathologic, genomic, and immunophenotypic correlates of KRASG12D-mutated non-small-cell lung cancer

    Dissecting the clinicopathologic, genomic, and immunophenotypic correlates of KRASG12D-mutated non-small-cell lung cancer od Biagio Ricciuti, Joao V. Alessi, Arielle Elkrief, Xinan Wang, Alessio Cortellini, Y Y Li, Victor R. Vaz, Hersh Gupta, Federica Pecci, Adriana P C Barrichello, Giuseppe Lamberti, Tom Nguyen, James Lindsay, Bijaya Sharma, Kristen D. Felt, Scott J. Rodig, Mizuki Nishino, Lynette M. Sholl, David A. Barbie, Marcelo V. Negrão, Jenny L. Zhang, Andrew D. Cherniack, John V. Heymach, Matthew Meyerson, Chiara Ambrogio, Pasi A. Jänne, Kathryn C. Arbour, David J. Pinato, Ferdinandos Skoulidis, Adam J. Schoenfeld, Mark M. Awad, Jia Luo

    Izdano 2022
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  9. 9
    Impact of Aneuploidy and Chromosome 9p Loss on Tumor Immune Microenvironment and Immune Checkpoint Inhibitor Efficacy in NSCLC

    Impact of Aneuploidy and Chromosome 9p Loss on Tumor Immune Microenvironment and Immune Checkpoint Inhibitor Efficacy in NSCLC od Joao V. Alessi, Xinan Wang, Arielle Elkrief, Biagio Ricciuti, Yvonne Y. Li, Hersh Gupta, Liam F. Spurr, Hira Rizvi, Jia Luo, Federica Pecci, Giuseppe Lamberti, Gonzalo Recondo, Deepti Venkatraman, Alessandro Di Federico, Malini Gandhi, Victor R. Vaz, Mizuki Nishino, Lynette M. Sholl, Andrew D. Cherniack, Marc Ladanyi, Adam Price, Allison L. Richards, Mark T.A. Donoghue, James Lindsay, Bijaya Sharma, Madison Turner, Kathleen L. Pfaff, Kristen D. Felt, Scott J. Rodig, Xihong Lin, Matthew Meyerson, Bruce E. Johnson, David C. Christiani, Adam J. Schoenfeld, Mark M. Awad

    Izdano 2023
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  10. 10
    A Randomized Trial of Combined PD-L1 and CTLA-4 Inhibition with Targeted Low-Dose or Hypofractionated Radiation for Patients with Metastatic Colorectal Cancer

    A Randomized Trial of Combined PD-L1 and CTLA-4 Inhibition with Targeted Low-Dose or Hypofractionated Radiation for Patients with Metastatic Colorectal Cancer od Arta M. Monjazeb, Anita Giobbie‐Hurder, Ana Lako, Emily M. Thrash, Ryan Brennick, Katrina Kao, Claire Manuszak, Ryan D. Gentzler, Anteneh Tesfaye, Salma K. Jabbour, Olatunji B. Alese, Osama E. Rahma, James M. Cleary, Elad Sharon, Harvey J. Mamon, May Cho, Howard Streicher, Helen X. Chen, Mansoor M. Ahmed, Adrián Mariño‐Enríquez, Seunghee Kim‐Schulze, Sacha Gnjatic, Emanual Maverakis, Alina I. Marusina, Alexander A. Merleev, Mariano Severgnini, Kathleen L. Pfaff, James Lindsay, Jason L. Weirather, Srinika Ranasinghe, Alexander Spektor, Scott J. Rodig, F. Stephen Hodi, Jonathan D. Schoenfeld

    Izdano 2021
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  11. 11
    Association of High Tumor Mutation Burden in Non–Small Cell Lung Cancers With Increased Immune Infiltration and Improved Clinical Outcomes of PD-L1 Blockade Across PD-L1 Expression Levels

    Association of High Tumor Mutation Burden in Non–Small Cell Lung Cancers With Increased Immune Infiltration and Improved Clinical Outcomes of PD-L1 Blockade Across PD-L1 Expression... od Biagio Ricciuti, Xinan Wang, Joao V. Alessi, Hira Rizvi, Navin R. Mahadevan, Yvonne Y. Li, Andrew Polio, James Lindsay, Renato Umeton, Rileen Sinha, Natalie I. Vokes, Gonzalo Recondo, Giuseppe Lamberti, Marissa Lawrence, Victor R. Vaz, Giulia C. Leonardi, Andrew J. Plodkowski, Hersh Gupta, Andrew D. Cherniack, Michael Tolstorukov, Bijaya Sharma, Kristen D. Felt, Justin F. Gainor, Arvind Ravi, Gad Getz, Kurt A. Schalper, Brian S. Henick, Patrick M. Forde, Valsamo Anagnostou, Pasi A. Jänne, Eliezer M. Van Allen, Mizuki Nishino, Lynette M. Sholl, David C. Christiani, Xihong Lin, Scott J. Rodig, Matthew D. Hellmann, Mark M. Awad

    Izdano 2022
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  12. 12
    Multi-omics Analysis Reveals Immune Features Associated with Immunotherapy Benefit in Patients with Squamous Cell Lung Cancer from Phase III Lung-MAP S1400I Trial

    Multi-omics Analysis Reveals Immune Features Associated with Immunotherapy Benefit in Patients with Squamous Cell Lung Cancer from Phase III Lung-MAP S1400I Trial od Edwin R. Parra, Jiexin Zhang, Dzifa Y. Duose, Edgar Gonzalez‐Kozlova, Mary W. Redman, Hong Chen, Ganiraju C. Manyam, Gayatri Kumar, Jianhua Zhang, Xingzhi Song, Rossana Lazcano, Mario L. Marques‐Piubelli, Caddie Laberiano-Fernández, Frank Rojas, Baili Zhang, Len Taing, Aashna Jhaveri, Jacob Geisberg, Jennifer Altreuter, Franziska Michor, James Provencher, Joyce Yu, Ethan Cerami, Radim Moravec, Kasthuri Kannan, Rajyalakshmi Luthra, Gheath Alatrash, Hsin-Hui Huang, Hui Xie, Manishkumar Patel, Kai Nie, Jocelyn Harris, Kimberly Argueta, James Lindsay, Roshni Biswas, Stephen Van Nostrand, Seunghee Kim‐Schulze, Jhanelle E. Gray, Roy S. Herbst, Ignacio I. Wistuba, Scott Gettinger, Karen Kelly, Lyudmila Bazhenova, Sacha Gnjatic, J. Jack Lee, Jianjun Zhang, Cara Haymaker

    Izdano 2024
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  13. 13
    Withdrawal of infliximab or concomitant immunosuppressant therapy in patients with Crohn's disease on combination therapy (SPARE): a multicentre, open-label, randomised controlled trial

    Withdrawal of infliximab or concomitant immunosuppressant therapy in patients with Crohn's disease on combination therapy (SPARE): a multicentre, open-label, randomised controlled... od Édouard Louis, Matthieu Resche‐Rigon, David Laharie, Jack Satsangi, Nik S. Ding, Britta Siegmund, Geert D’Haens, Laurence Picon, Peter Bossuyt, Lucine Vuitton, Peter M. Irving, Stéphanie Viennot, Christopher A Lamb, Richard Pollok, Filip Baert, Maria Nachury, Mathurin Fuméry, Cyrielle Gilletta, Sven Almér, Shomron Ben–Horin, Yoram Bouhnik, Jean‐Frédéric Colombel, Erik Hertervig, Jane M. Andrews, Miles Sparrow, Rupert W. Leong, Susan J. Connor, Graham Radforth-Smith, Peter De Cruz, J. Preiß, Andrea Stallmach, Thomas Liceni, O Grip, Jonas Halfvarson, Dharmaraj Durai, Fraser Cummings, Christian Seilinger, Miles Parkes, James Lindsay, Guy Lambrecht, Philippe Van Hootegem, Jean‐François Rahier, Marie Dewitte, Xavier Hébuterne, Elise Chanteloup, Romain Altwegg, Stéphane Nancey, Guillaume Bouguen, Guillaume Pineton de Chambrun, F. Poullenot, Xavier Roblin

    Izdano 2023
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  14. 14
    Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal

    Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal od Ino de Bruijn, Ritika Kundra, Brooke Mastrogiacomo, Thinh Ngoc Tran, Luke Sikina, Tali Mazor, Xiang Li, Angelica Ochoa, Gaofei Zhao, Bryan Lai, Adam Abeshouse, Diana Baiceanu, Ersin Ciftci, Uḡur Doḡrusöz, Andrew Dufilie, Ziya Erkoç, Elena Garcia Lara, Zhaoyuan Fu, Benjamin E. Gross, Charles Haynes, Allison P. Heath, David Higgins, Prasanna Jagannathan, Karthik Kalletla, Priti Kumari, James Lindsay, Aaron Lisman, Bas Leenknegt, Pieter Lukasse, Divya Madela, Ramyasree Madupuri, Pim van Nierop, Oleguer Plantalech, Joyce Quach, Adam Resnick, Sander Y.A. Rodenburg, Baby A. Satravada, Fedde Schaeffer, Robert L. Sheridan, Jessica Singh, Rajat Sirohi, S. Onur Sumer, Sjoerd van Hagen, Avery Wang, Manda Wilson, Hongxin Zhang, Kelsey Zhu, Nicole Rusk, Samantha Brown, Jessica A. Lavery, Katherine S. Panageas, Julia E. Rudolph, Michele L. Lenoue-Newton, Jeremy L. Warner, Xindi Guo, Haley Hunter-Zinck, Thomas Yu, Shirin Pilai, Chelsea Nichols, Stuart M. Gardos, John Philip, Kenneth L. Kehl, Gregory J. Riely, Deborah Schrag, Jocelyn Lee, Michael V. Fiandalo, Shawn M. Sweeney, Trevor J. Pugh, Chris Sander, Ethan Cerami, Jianjiong Gao, Nikolaus Schultz

    Izdano 2023
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  15. 15
    AACR Project GENIE: Powering Precision Medicine through an International Consortium

    AACR Project GENIE: Powering Precision Medicine through an International Consortium od Fabrice André, Mónica Arnedos, Alexander S. Baras, José Baselga, Philippe L. Bédard, Michael F. Berger, Mariska Bierkens, Fabien Calvo, Ethan Cerami, Debyani Chakravarty, Kristen K. Dang, Nancy E. Davidson, Catherine Del Vecchio Fitz, Semih Doğan, Raymond N. DuBois, Matthew D. Ducar, P. Andrew Futreal, Jianjiong Gao, Francisco Moacir Pinheiro Garcia, Stuart M. Gardos, Christopher D. Gocke, Benjamin Groß, Justin Guinney, Zachary Heins, Stephanie Hintzen, Hugo M. Horlings, Jan Hudeček, David M. Hyman, Suzanne Kamel‐Reid, Cyriac Kandoth, Walter Kinyua, Priti Kumari, Ritika Kundra, Marc Ladanyi, Céline Lefèbvre, Michele L. Lenoue-Newton, Eva M. Lepisto, Mia Levy, Neal I. Lindeman, James Lindsay, David Liu, Zhibin Lu, Laura E. MacConaill, Ian Maurer, David S. Maxwell, Gerrit A. Meijer, Funda Meric‐Bernstam, Christine Micheel, Clinton Miller, Gordon B. Mills, Nathanael D. Moore, Petra M. Nederlof, Larsson Omberg, John A. Orechia, Ben Ho Park, Trevor J. Pugh, Brendan Reardon, Barrett J. Rollins, Mark J. Routbort, Charles L. Sawyers, Deborah Schrag, Nikolaus Schultz, Kenna Shaw, Priyanka Shivdasani, Lillian L. Siu, David B. Solit, Gabe S. Sonke, Jean Charles Soria, Parin Sripakdeevong, Natalie Stickle, Thomas Stricker, Shawn M. Sweeney, Barry S. Taylor, Jelle J. ten Hoeve, Stacy B. Thomas, Eliezer M. Van Allen, Laura van ‘t Veer, Tony van de Velde, Harm van Tinteren, Victor E. Velculescu, Carl Virtanen, Emile E. Voest, Lucy Lu Wang, Chetna Wathoo, Stuart Watt, Celeste Yu, Thomas Yu, Emily Yu, Ahmet Zehir, Hongxin Zhang

    Izdano 2017
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  16. 16
    Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

    Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development od Marilyn B. Renfree, Anthony T. Papenfuss, Janine E. Deakin, James Lindsay, Thomas Heider, Katherine Belov, Willem Rens, Paul D. Waters, Elizabeth A. Pharo, Geoff Shaw, Emily Wong, Christophe Lefèvre, Kevin R. Nicholas, Yoko Kuroki, Matthew J. Wakefield, Kyall R. Zenger, Chenwei Wang, M.A. Ferguson‐Smith, F. W. Nicholas, Danielle Hickford, Hongshi Yu, Kirsty R. Short, Hannah V. Siddle, Stephen Frankenberg, Keng Yih Chew, Brandon R. Menzies, Jessica M. Stringer, Shunsuke Suzuki, Timothy A. Hore, Margaret L. Delbridge, Hardip R. Patel, Amir Hossein Mohammadi, Nanette Y. Schneider, Yanqiu Hu, William O'Hara, Shafagh Al Nadaf, Chen Wu, Zhiping Feng, Benjamin G. Cocks, Jianhui Wang, Paul Flicek, Stephen M. J. Searle, Susan Fairley, Kathryn Beal, Javier Herrero, Dawn M. Carone, Yutaka Suzuki, Sumio Sugano, Atsushi Toyoda, Yoshiyuki Sakaki, Shinji Kondo, Yuichiro Nishida, Shoji Tatsumoto, Ion Mandiou, Arthur Hsu, Kaighin A. McColl, Benjamin Lansdell, George M. Weinstock, Elizabeth S. Kuczek, Annette McGrath, Peter J. Wilson, A. Men, Mehlika Hazar-Rethinam, Allison Hall, John Davis, David Wood, Sarah Williams, Yogi Sundaravadanam, Donna M. Muzny, Shalini N. Jhangiani, Lora Lewis, Margaret Morgan, Geoffrey Okwuonu, San Juana Ruiz, Jireh Santibanez, Lynne Nazareth, Andrew Cree, Gerald Fowler, Christie Kovar, Huyen Dinh, Vandita Joshi, Chyn Jing, Fremiet Lara, Rebecca Thornton, Lei Chen, Jixin Deng, Yue Liu, Joshua Y Shen, Xingzhi Song, Janette Edson, Carmen Troon, Daniel S. Thomas, Amber Stephens, Lankesha Yapa, Tanya Levchenko, Richard A. Gibbs, Desmond W. Cooper, Terence P. Speed, Asao Fujiyama, Jennifer A. Marshall Graves

    Izdano 2011
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