Iskani rezultati za avtorja

1

The Biomolecular Interaction Network Database in PSI-MI 2.5 od Isserlin, Ruth, El-Badrawi, Rashad A., Bader, Gary D.

Izdano 2011

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2

WordCloud: a Cytoscape plugin to create a visual semantic summary of networks od Oesper, Layla, Merico, Daniele, Isserlin, Ruth, Bader, Gary D

Izdano 2011

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3

Enrichment Map – a Cytoscape app to visualize and explore OMICs pathway enrichment results od Isserlin, Ruth, Merico, Daniele, Voisin, Veronique, Bader, Gary D.

Izdano 2014

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4

AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations od Kucera, Mike, Isserlin, Ruth, Arkhangorodsky, Arkady, Bader, Gary D.

Izdano 2016

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5

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation od Merico, Daniele, Isserlin, Ruth, Stueker, Oliver, Emili, Andrew, Bader, Gary D.

Izdano 2010

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6

Social Network: a Cytoscape app for visualizing co-authorship networks od Kofia, Victor, Isserlin, Ruth, Buchan, Alison M.J., Bader, Gary D.

Izdano 2015

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7

Control of tissue development and cell diversity by cell cycle-dependent transcriptional filtering od Abou Chakra, Maria, Isserlin, Ruth, Tran, Thinh N, Bader, Gary D

Izdano 2021

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8

RCy3: Network biology using Cytoscape from within R od Gustavsen, Julia A., Pai, Shraddha, Isserlin, Ruth, Demchak, Barry, Pico, Alexander R.

Izdano 2019

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9

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps od Isserlin, Ruth, Merico, Daniele, Alikhani-Koupaei, Rasoul, Gramolini, Anthony, Bader, Gary D, Emili, Andrew

Izdano 2010

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10

netDx: interpretable patient classification using integrated patient similarity networks od Pai, Shraddha, Hui, Shirley, Isserlin, Ruth, Shah, Muhammad A, Kaka, Hussam, Bader, Gary D

Izdano 2019

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11

SeqHound: biological sequence and structure database as a platform for bioinformatics research od Michalickova, Katerina, Bader, Gary D, Dumontier, Michel, Lieu, Hao, Betel, Doron, Isserlin, Ruth, Hogue, Christopher WV

Izdano 2002

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12

Structure-Templated Predictions of Novel Protein Interactions from Sequence Information od Betel, Doron, Breitkreuz, Kevin E, Isserlin, Ruth, Dewar-Darch, Danielle, Tyers, Mike, Hogue, Christopher W. V

Izdano 2007

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13

Discovery of Novel Disease-specific and Membrane-associated Candidate Markers in a Mouse Model of Multiple Sclerosis od Dagley, Laura F., Croft, Nathan P., Isserlin, Ruth, Olsen, Jonathan B., Fong, Vincent, Emili, Andrew, Purcell, Anthony W.

Izdano 2014

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14

Systems analysis reveals down-regulation of a network of pro-survival miRNAs drives the apoptotic response in dilated cardiomyopathy od Isserlin, Ruth, Merico, Daniele, Wang, Dingyan, Vuckovic, Dajana, Bousette, Nicolas, Gramolini, Anthony O., Bader, Gary D., Emili, Andrew

Izdano 2014

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15

Integrative Network Analysis of Signaling in Human CD34+ Hematopoietic Progenitor Cells by Global Phosphoproteomic Profiling Using TiO2 Enrichment Combined with 2D LC-MS/MS and Pat... od Guo, Hongbo, Isserlin, Ruth, Chen, Xiaoji, Wang, Weijia, Phanse, Sadhna, Zandstra, Peter W., Bader, Gary, Paddison, Patrick, Emili, Andrew

Izdano 2013

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16

Global phosphoproteomic profiling reveals perturbed signaling in a mouse model of dilated cardiomyopathy od Kuzmanov, Uros, Guo, Hongbo, Buchsbaum, Diana, Cosme, Jake, Abbasi, Cynthia, Isserlin, Ruth, Sharma, Parveen, Gramolini, Anthony O., Emili, Andrew

Izdano 2016

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17

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression od Kamdar, Shivani, Isserlin, Ruth, Van der Kwast, Theodorus, Zlotta, Alexandre R., Bader, Gary D., Fleshner, Neil E., Bapat, Bharati

Izdano 2019

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18

Distinct DNA methylation patterns associated with treatment resistance in metastatic castration resistant prostate cancer od Peter, Madonna R., Bilenky, Misha, Davies, Alastair, Isserlin, Ruth, Bader, Gary D., Fleshner, Neil E., Hirst, Martin, Zoubeidi, Amina, Bapat, Bharati

Izdano 2021

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19

Unbiased phosphoproteomic method identifies the initial effects of a methacrylic acid copolymer on macrophages od Chamberlain, Michael Dean, Wells, Laura A., Lisovsky, Alexandra, Guo, Hongbo, Isserlin, Ruth, Talior-Volodarsky, Ilana, Mahou, Redouan, Emili, Andrew, Sefton, Michael V.

Izdano 2015

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20

Dynamic interplay between locus-specific DNA methylation and hydroxymethylation regulates distinct biological pathways in prostate carcinogenesis od Kamdar, Shivani N., Ho, Linh T., Kron, Ken J., Isserlin, Ruth, van der Kwast, Theodorus, Zlotta, Alexandre R., Fleshner, Neil E., Bader, Gary, Bapat, Bharati

Izdano 2016

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Rezultati - Isserlin, Ruth

The Biomolecular Interaction Network Database in PSI-MI 2.5 od Isserlin, Ruth, El-Badrawi, Rashad A., Bader, Gary D.

WordCloud: a Cytoscape plugin to create a visual semantic summary of networks od Oesper, Layla, Merico, Daniele, Isserlin, Ruth, Bader, Gary D

Enrichment Map – a Cytoscape app to visualize and explore OMICs pathway enrichment results od Isserlin, Ruth, Merico, Daniele, Voisin, Veronique, Bader, Gary D.

AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations od Kucera, Mike, Isserlin, Ruth, Arkhangorodsky, Arkady, Bader, Gary D.

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation od Merico, Daniele, Isserlin, Ruth, Stueker, Oliver, Emili, Andrew, Bader, Gary D.

Social Network: a Cytoscape app for visualizing co-authorship networks od Kofia, Victor, Isserlin, Ruth, Buchan, Alison M.J., Bader, Gary D.

Control of tissue development and cell diversity by cell cycle-dependent transcriptional filtering od Abou Chakra, Maria, Isserlin, Ruth, Tran, Thinh N, Bader, Gary D

RCy3: Network biology using Cytoscape from within R od Gustavsen, Julia A., Pai, Shraddha, Isserlin, Ruth, Demchak, Barry, Pico, Alexander R.

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps od Isserlin, Ruth, Merico, Daniele, Alikhani-Koupaei, Rasoul, Gramolini, Anthony, Bader, Gary D, Emili, Andrew

netDx: interpretable patient classification using integrated patient similarity networks od Pai, Shraddha, Hui, Shirley, Isserlin, Ruth, Shah, Muhammad A, Kaka, Hussam, Bader, Gary D

SeqHound: biological sequence and structure database as a platform for bioinformatics research od Michalickova, Katerina, Bader, Gary D, Dumontier, Michel, Lieu, Hao, Betel, Doron, Isserlin, Ruth, Hogue, Christopher WV

Structure-Templated Predictions of Novel Protein Interactions from Sequence Information od Betel, Doron, Breitkreuz, Kevin E, Isserlin, Ruth, Dewar-Darch, Danielle, Tyers, Mike, Hogue, Christopher W. V

Discovery of Novel Disease-specific and Membrane-associated Candidate Markers in a Mouse Model of Multiple Sclerosis od Dagley, Laura F., Croft, Nathan P., Isserlin, Ruth, Olsen, Jonathan B., Fong, Vincent, Emili, Andrew, Purcell, Anthony W.

Systems analysis reveals down-regulation of a network of pro-survival miRNAs drives the apoptotic response in dilated cardiomyopathy od Isserlin, Ruth, Merico, Daniele, Wang, Dingyan, Vuckovic, Dajana, Bousette, Nicolas, Gramolini, Anthony O., Bader, Gary D., Emili, Andrew

Global phosphoproteomic profiling reveals perturbed signaling in a mouse model of dilated cardiomyopathy od Kuzmanov, Uros, Guo, Hongbo, Buchsbaum, Diana, Cosme, Jake, Abbasi, Cynthia, Isserlin, Ruth, Sharma, Parveen, Gramolini, Anthony O., Emili, Andrew

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression od Kamdar, Shivani, Isserlin, Ruth, Van der Kwast, Theodorus, Zlotta, Alexandre R., Bader, Gary D., Fleshner, Neil E., Bapat, Bharati

Distinct DNA methylation patterns associated with treatment resistance in metastatic castration resistant prostate cancer od Peter, Madonna R., Bilenky, Misha, Davies, Alastair, Isserlin, Ruth, Bader, Gary D., Fleshner, Neil E., Hirst, Martin, Zoubeidi, Amina, Bapat, Bharati

Unbiased phosphoproteomic method identifies the initial effects of a methacrylic acid copolymer on macrophages od Chamberlain, Michael Dean, Wells, Laura A., Lisovsky, Alexandra, Guo, Hongbo, Isserlin, Ruth, Talior-Volodarsky, Ilana, Mahou, Redouan, Emili, Andrew, Sefton, Michael V.

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