Resultados de búsqueda - Irwin Jungreis

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  1. 1
    SARS-CoV-2 gene content and COVID-19 mutation impact by comparing 44 Sarbecovirus genomes

    SARS-CoV-2 gene content and COVID-19 mutation impact by comparing 44 Sarbecovirus genomes por Irwin Jungreis, Rachel Sealfon, Manolis Kellis

    Publicado 2021
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  2. 2
    PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

    PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions por Michael F. Lin, Irwin Jungreis, Manolis Kellis

    Publicado 2011
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  3. 3
    Elucidation of Codon Usage Signatures across the Domains of Life

    Elucidation of Codon Usage Signatures across the Domains of Life por Eva Maria Novoa, Irwin Jungreis, Olivier Jaillon, Manolis Kellis

    Publicado 2019
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  4. 4
    Evolutionary Dynamics of Abundant Stop Codon Readthrough

    Evolutionary Dynamics of Abundant Stop Codon Readthrough por Irwin Jungreis, Clara S. Chan, Robert M. Waterhouse, Gabriel Fields, Michael F. Lin, Manolis Kellis

    Publicado 2016
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  5. 5
    FRESCo: finding regions of excess synonymous constraint in diverse viruses

    FRESCo: finding regions of excess synonymous constraint in diverse viruses por Rachel Sealfon, Michael F. Lin, Irwin Jungreis, Maxim Y. Wolf, Manolis Kellis, Pardis C. Sabeti

    Publicado 2015
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  6. 6
    Evidence of abundant stop codon readthrough in <i>Drosophila</i> and other metazoa

    Evidence of abundant stop codon readthrough in <i>Drosophila</i> and other metazoa por Irwin Jungreis, Michael F. Lin, Rebecca Spokony, Clara S. Chan, Nicolas Nègre, Alec Victorsen, Kevin P. White, Manolis Kellis

    Publicado 2011
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  7. 7
    Evidence for a novel overlapping coding sequence in POLG initiated at a CUG start codon

    Evidence for a novel overlapping coding sequence in POLG initiated at a CUG start codon por Yousuf A. Khan, Irwin Jungreis, James C. Wright, Jonathan M. Mudge, Jyoti S. Choudhary, Andrew E. Firth, Manolis Kellis

    Publicado 2020
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  8. 8
    Improved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides

    Improved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides por Jiao Ma, Jolene K. Diedrich, Irwin Jungreis, Cynthia J. Donaldson, Joan Vaughan, Manolis Kellis, John R. Yates, Alan Saghatelian

    Publicado 2016
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  9. 9
    Stop codon readthrough generates a C-terminally extended variant of the human vitamin D receptor with reduced calcitriol response

    Stop codon readthrough generates a C-terminally extended variant of the human vitamin D receptor with reduced calcitriol response por Gary Loughran, Irwin Jungreis, Ioanna Tzani, Michael Power, Ruslan I. Dmitriev, Ivaylo P. Ivanov, Manolis Kellis, John F. Atkins

    Publicado 2018
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  10. 10
    Loose ends: almost one in five human genes still have unresolved coding status

    Loose ends: almost one in five human genes still have unresolved coding status por Federico Abascal, David Juan, Irwin Jungreis, Laura Martínez Gómez, Maria Rigau, José Manuel Rodrı́guez, Jesús Vázquez, Michael L. Tress

    Publicado 2018
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  11. 11
    Evidence of efficient stop codon readthrough in four mammalian genes

    Evidence of efficient stop codon readthrough in four mammalian genes por Gary Loughran, Ming-Yuan Chou, Ivaylo P. Ivanov, Irwin Jungreis, Manolis Kellis, Anmol Kiran, Pavel V. Baranov, John F. Atkins

    Publicado 2014
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  12. 12
    Discovery of Human sORF-Encoded Polypeptides (SEPs) in Cell Lines and Tissue

    Discovery of Human sORF-Encoded Polypeptides (SEPs) in Cell Lines and Tissue por Jiao Ma, Carl Ward, Irwin Jungreis, Sarah A. Slavoff, Adam G. Schwaid, John M. Neveu, Bogdan Budnik, Manolis Kellis, Alan Saghatelian

    Publicado 2014
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  13. 13
    Translation Initiation Site Profiling Reveals Widespread Synthesis of Non-AUG-Initiated Protein Isoforms in Yeast

    Translation Initiation Site Profiling Reveals Widespread Synthesis of Non-AUG-Initiated Protein Isoforms in Yeast por Amy Eisenberg, Andrea L. Higdon, Ina Hollerer, Alexander P. Fields, Irwin Jungreis, Paige D. Diamond, Manolis Kellis, Marko Jovanović, Gloria A. Brar

    Publicado 2020
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  14. 14
    Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci

    Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci por Jonathan M. Mudge, Irwin Jungreis, Toby Hunt, José M. González, James C. Wright, Mike Kay, Claire Davidson, Stephen Fitzgerald, Ruth L. Seal, Susan Tweedie, Liang He, Robert M. Waterhouse, Yue Li, Elspeth A. Bruford, Jyoti S. Choudhary, Adam Frankish, Manolis Kellis

    Publicado 2019
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  15. 15
    Specific viral RNA drives the SARS CoV-2 nucleocapsid to phase separate

    Specific viral RNA drives the SARS CoV-2 nucleocapsid to phase separate por Christiane Iserman, Christine Roden, Mark A. Boerneke, Rachel Sealfon, Grace A. McLaughlin, Irwin Jungreis, Christopher Y. Park, Avinash Boppana, Ethan J. Fritch, Yixuan J. Hou, Chandra L. Theesfeld, Olga G. Troyanskaya, Ralph S. Baric, Timothy P. Sheahan, Kevin M. Weeks, Amy S. Gladfelter

    Publicado 2020
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  16. 16
    Genomic RNA Elements Drive Phase Separation of the SARS-CoV-2 Nucleocapsid

    Genomic RNA Elements Drive Phase Separation of the SARS-CoV-2 Nucleocapsid por Christiane Iserman, Christine Roden, Mark A. Boerneke, Rachel Sealfon, Grace A. McLaughlin, Irwin Jungreis, Ethan J. Fritch, Yixuan J. Hou, Joanne Ekena, Chase A. Weidmann, Chandra L. Theesfeld, Manolis Kellis, Olga G. Troyanskaya, Ralph S. Baric, Timothy P. Sheahan, Kevin M. Weeks, Amy S. Gladfelter

    Publicado 2020
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  17. 17
    Calcifediol Treatment and Hospital Mortality Due to COVID-19: A Cohort Study

    Calcifediol Treatment and Hospital Mortality Due to COVID-19: A Cohort Study por Juan F. Alcalá‐Díaz, Laura Limia Pérez, Ricardo Gómez‐Huelgas, María Dolores Martín Escalante, Begoña Cortés Rodríguez, José Luis Zambrana-García, Marta Entrenas Castillo, Ana I. Perez‐Caballero, María D. López-Carmona, Javier García‐Alegría, A Lozano, Maria del Sol Arenas-de Larriva, Luis M. Pérez‐Belmonte, Irwin Jungreis, Roger Bouillon, Jose Manual Quesada-Gomez, José López‐Miranda

    Publicado 2021
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  18. 18
    The SARS-CoV-2 protein ORF3c is a mitochondrial modulator of innate immunity

    The SARS-CoV-2 protein ORF3c is a mitochondrial modulator of innate immunity por Hazel Stewart, Yongxu Lu, Sarah O’Keefe, Anusha Valpadashi, Luis Daniel Cruz‐Zaragoza, Hendrik A. Michel, Samantha K. Nguyen, George Carnell, Nina I. Lukhovitskaya, Rachel Milligan, Yasmin Adewusi, Irwin Jungreis, Valeria Lulla, David A. Matthews, Stephen High, Peter Rehling, Edward Emmott, Jonathan L. Heeney, Andrew D. Davidson, James R. Edgar, Geoffrey L. Smith, Andrew E. Firth

    Publicado 2023
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  19. 19
    Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer

    Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer por Tamara Ouspenskaia, Travis Law, Karl R. Clauser, Susan Klaeger, Siranush Sarkizova, François Aguet, Bo Li, Elena Christian, Binyamin A. Knisbacher, Phuong M. Le, Christina R. Hartigan, Hasmik Keshishian, Annie Apffel, Giacomo Oliveira, Wandi Zhang, Yuen Ting Chow, Zhe Ji, Irwin Jungreis, Sachet A. Shukla, Pavan Bachireddy, Manolis Kellis, Gad Getz, Nir Hacohen, Derin B. Keskin, Steven A. Carr, Catherine J. Wu, Aviv Regev

    Publicado 2020
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  20. 20
    Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer

    Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer por Tamara Ouspenskaia, Travis Law, Karl R. Clauser, Susan Klaeger, Siranush Sarkizova, François Aguet, Bo Li, Elena Christian, Binyamin A. Knisbacher, Phuong M. Le, Christina R. Hartigan, Hasmik Keshishian, Annie Apffel, Giacomo Oliveira, Wandi Zhang, Sarah Chen, Yuen Ting Chow, Zhe Ji, Irwin Jungreis, Sachet A. Shukla, Sune Justesen, Pavan Bachireddy, Manolis Kellis, Gad Getz, Nir Hacohen, Derin B. Keskin, Steven A. Carr, Catherine J. Wu, Aviv Regev

    Publicado 2021
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