Ngā hua rapu - Huang, Tim HM

Identifying differentially methylated genes using mixed effect and generalized least square models mā Sun, Shuying, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

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Construction and evaluation of robust interpretation models for breast cancer metastasis prediction mā Adnan, Nahim, Zand, Maryam, Huang, Tim HM, Ruan, Jianhua

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Probe signal correction for differential methylation hybridization experiments mā Potter, Dustin P, Yan, Pearlly, Huang, Tim HM, Lin, Shili

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Comparative evaluation of network features for the prediction of breast cancer metastasis mā Adnan, Nahim, Liu, Zhijie, Huang, Tim H.M., Ruan, Jianhua

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Preprocessing differential methylation hybridization microarray data mā Sun, Shuying, Huang, Yi-Wen, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

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A Poisson mixture model to identify changes in RNA polymerase II binding quantity using high-throughput sequencing technology mā Feng, Weixing, Liu, Yunlong, Wu, Jiejun, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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Identifying hypermethylated CpG islands using a quantile regression model mā Sun, Shuying, Chen, Zhengyi, Yan, Pearlly S, Huang, Yi-Wen, Huang, Tim HM, Lin, Shili

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Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array mā Singer, Gregory AC, Wu, Jiejun, Yan, Pearlly, Plass, Christoph, Huang, Tim HM, Davuluri, Ramana V

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A modulator based regulatory network for ERα signaling pathway mā Wu, Heng-Yi, Zheng, Pengyue, Jiang, Guanglong, Liu, Yunlong, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions mā Liu, Bin, Yi, Jimmy, SV, Aishwarya, Lan, Xun, Ma, Yilin, Huang, Tim HM, Leone, Gustavo, Jin, Victor X

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Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands mā Dai, Wei, Teodoridis, Jens M, Graham, Janet, Zeller, Constanze, Huang, Tim HM, Yan, Pearlly, Vass, J Keith, Brown, Robert, Paul, Jim

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STAT3 can be activated through paracrine signaling in breast epithelial cells mā Lieblein, Jacqueline C, Ball, Sarah, Hutzen, Brian, Sasser, A Kate, Lin, Huey-Jen, Huang, Tim HM, Hall, Brett M, Lin, Jiayuh

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Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer mā Li, Meng, Balch, Curt, Montgomery, John S, Jeong, Mikyoung, Chung, Jae Hoon, Yan, Pearlly, Huang, Tim HM, Kim, Sun, Nephew, Kenneth P

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Identification of novel DNA methylation inhibitors via a two-component reporter gene system mā Lin, Yi-Shiuan, Shaw, Arthur Y, Wang, Shi-Gang, Hsu, Chia-Chen, Teng, I-Wen, Tseng, Min-Jen, Huang, Tim HM, Chen, Ching-Shih, Leu, Yu-Wei, Hsiao, Shu-Huei

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Multivalent epigenetic marks confer microenvironment-responsive epigenetic plasticity to ovarian cancer cells mā Bapat, Sharmila A, Jin, Victor, Berry, Nicholas, Balch, Curt, Sharma, Neeti, Kurrey, Nawneet, Zhang, Shu, Fang, Fang, Lan, Xun, Li, Meng, Kennedy, Brian, Bigsby, Robert M, Huang, Tim HM, Nephew, Kenneth P

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A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer mā Shen, Changyu, Huang, Yiwen, Liu, Yunlong, Wang, Guohua, Zhao, Yuming, Wang, Zhiping, Teng, Mingxiang, Wang, Yadong, Flockhart, David A, Skaar, Todd C, Yan, Pearlly, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules mā Qin, Huaxia, Chan, Michael WY, Liyanarachchi, Sandya, Balch, Curtis, Potter, Dustin, Souriraj, Irene J, Cheng, Alfred SL, Agosto-Perez, Francisco J, Nikonova, Elena V, Yan, Pearlly S, Lin, Huey-Jen, Nephew, Kenneth P, Saltz, Joel H, Showe, Louise C, Huang, Tim HM, Davuluri, Ramana V

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