Torthaí cuardaigh - Huang, Tim HM

Identifying differentially methylated genes using mixed effect and generalized least square models de réir Sun, Shuying, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

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Construction and evaluation of robust interpretation models for breast cancer metastasis prediction de réir Adnan, Nahim, Zand, Maryam, Huang, Tim HM, Ruan, Jianhua

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Probe signal correction for differential methylation hybridization experiments de réir Potter, Dustin P, Yan, Pearlly, Huang, Tim HM, Lin, Shili

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Comparative evaluation of network features for the prediction of breast cancer metastasis de réir Adnan, Nahim, Liu, Zhijie, Huang, Tim H.M., Ruan, Jianhua

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Preprocessing differential methylation hybridization microarray data de réir Sun, Shuying, Huang, Yi-Wen, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

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A Poisson mixture model to identify changes in RNA polymerase II binding quantity using high-throughput sequencing technology de réir Feng, Weixing, Liu, Yunlong, Wu, Jiejun, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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Identifying hypermethylated CpG islands using a quantile regression model de réir Sun, Shuying, Chen, Zhengyi, Yan, Pearlly S, Huang, Yi-Wen, Huang, Tim HM, Lin, Shili

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Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array de réir Singer, Gregory AC, Wu, Jiejun, Yan, Pearlly, Plass, Christoph, Huang, Tim HM, Davuluri, Ramana V

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A modulator based regulatory network for ERα signaling pathway de réir Wu, Heng-Yi, Zheng, Pengyue, Jiang, Guanglong, Liu, Yunlong, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions de réir Liu, Bin, Yi, Jimmy, SV, Aishwarya, Lan, Xun, Ma, Yilin, Huang, Tim HM, Leone, Gustavo, Jin, Victor X

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Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands de réir Dai, Wei, Teodoridis, Jens M, Graham, Janet, Zeller, Constanze, Huang, Tim HM, Yan, Pearlly, Vass, J Keith, Brown, Robert, Paul, Jim

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STAT3 can be activated through paracrine signaling in breast epithelial cells de réir Lieblein, Jacqueline C, Ball, Sarah, Hutzen, Brian, Sasser, A Kate, Lin, Huey-Jen, Huang, Tim HM, Hall, Brett M, Lin, Jiayuh

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Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer de réir Li, Meng, Balch, Curt, Montgomery, John S, Jeong, Mikyoung, Chung, Jae Hoon, Yan, Pearlly, Huang, Tim HM, Kim, Sun, Nephew, Kenneth P

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Identification of novel DNA methylation inhibitors via a two-component reporter gene system de réir Lin, Yi-Shiuan, Shaw, Arthur Y, Wang, Shi-Gang, Hsu, Chia-Chen, Teng, I-Wen, Tseng, Min-Jen, Huang, Tim HM, Chen, Ching-Shih, Leu, Yu-Wei, Hsiao, Shu-Huei

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Multivalent epigenetic marks confer microenvironment-responsive epigenetic plasticity to ovarian cancer cells de réir Bapat, Sharmila A, Jin, Victor, Berry, Nicholas, Balch, Curt, Sharma, Neeti, Kurrey, Nawneet, Zhang, Shu, Fang, Fang, Lan, Xun, Li, Meng, Kennedy, Brian, Bigsby, Robert M, Huang, Tim HM, Nephew, Kenneth P

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A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer de réir Shen, Changyu, Huang, Yiwen, Liu, Yunlong, Wang, Guohua, Zhao, Yuming, Wang, Zhiping, Teng, Mingxiang, Wang, Yadong, Flockhart, David A, Skaar, Todd C, Yan, Pearlly, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules de réir Qin, Huaxia, Chan, Michael WY, Liyanarachchi, Sandya, Balch, Curtis, Potter, Dustin, Souriraj, Irene J, Cheng, Alfred SL, Agosto-Perez, Francisco J, Nikonova, Elena V, Yan, Pearlly S, Lin, Huey-Jen, Nephew, Kenneth P, Saltz, Joel H, Showe, Louise C, Huang, Tim HM, Davuluri, Ramana V

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