Bilaketaren emaitzak - Huang, Tim HM

Identifying differentially methylated genes using mixed effect and generalized least square models nork Sun, Shuying, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

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Construction and evaluation of robust interpretation models for breast cancer metastasis prediction nork Adnan, Nahim, Zand, Maryam, Huang, Tim HM, Ruan, Jianhua

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Probe signal correction for differential methylation hybridization experiments nork Potter, Dustin P, Yan, Pearlly, Huang, Tim HM, Lin, Shili

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Comparative evaluation of network features for the prediction of breast cancer metastasis nork Adnan, Nahim, Liu, Zhijie, Huang, Tim H.M., Ruan, Jianhua

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Preprocessing differential methylation hybridization microarray data nork Sun, Shuying, Huang, Yi-Wen, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

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A Poisson mixture model to identify changes in RNA polymerase II binding quantity using high-throughput sequencing technology nork Feng, Weixing, Liu, Yunlong, Wu, Jiejun, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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Identifying hypermethylated CpG islands using a quantile regression model nork Sun, Shuying, Chen, Zhengyi, Yan, Pearlly S, Huang, Yi-Wen, Huang, Tim HM, Lin, Shili

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Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array nork Singer, Gregory AC, Wu, Jiejun, Yan, Pearlly, Plass, Christoph, Huang, Tim HM, Davuluri, Ramana V

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A modulator based regulatory network for ERα signaling pathway nork Wu, Heng-Yi, Zheng, Pengyue, Jiang, Guanglong, Liu, Yunlong, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions nork Liu, Bin, Yi, Jimmy, SV, Aishwarya, Lan, Xun, Ma, Yilin, Huang, Tim HM, Leone, Gustavo, Jin, Victor X

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Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands nork Dai, Wei, Teodoridis, Jens M, Graham, Janet, Zeller, Constanze, Huang, Tim HM, Yan, Pearlly, Vass, J Keith, Brown, Robert, Paul, Jim

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STAT3 can be activated through paracrine signaling in breast epithelial cells nork Lieblein, Jacqueline C, Ball, Sarah, Hutzen, Brian, Sasser, A Kate, Lin, Huey-Jen, Huang, Tim HM, Hall, Brett M, Lin, Jiayuh

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Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer nork Li, Meng, Balch, Curt, Montgomery, John S, Jeong, Mikyoung, Chung, Jae Hoon, Yan, Pearlly, Huang, Tim HM, Kim, Sun, Nephew, Kenneth P

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Identification of novel DNA methylation inhibitors via a two-component reporter gene system nork Lin, Yi-Shiuan, Shaw, Arthur Y, Wang, Shi-Gang, Hsu, Chia-Chen, Teng, I-Wen, Tseng, Min-Jen, Huang, Tim HM, Chen, Ching-Shih, Leu, Yu-Wei, Hsiao, Shu-Huei

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Multivalent epigenetic marks confer microenvironment-responsive epigenetic plasticity to ovarian cancer cells nork Bapat, Sharmila A, Jin, Victor, Berry, Nicholas, Balch, Curt, Sharma, Neeti, Kurrey, Nawneet, Zhang, Shu, Fang, Fang, Lan, Xun, Li, Meng, Kennedy, Brian, Bigsby, Robert M, Huang, Tim HM, Nephew, Kenneth P

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A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer nork Shen, Changyu, Huang, Yiwen, Liu, Yunlong, Wang, Guohua, Zhao, Yuming, Wang, Zhiping, Teng, Mingxiang, Wang, Yadong, Flockhart, David A, Skaar, Todd C, Yan, Pearlly, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

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An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules nork Qin, Huaxia, Chan, Michael WY, Liyanarachchi, Sandya, Balch, Curtis, Potter, Dustin, Souriraj, Irene J, Cheng, Alfred SL, Agosto-Perez, Francisco J, Nikonova, Elena V, Yan, Pearlly S, Lin, Huey-Jen, Nephew, Kenneth P, Saltz, Joel H, Showe, Louise C, Huang, Tim HM, Davuluri, Ramana V

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