Search Results - Huang, Tim HM

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  1. 1
    Identifying differentially methylated genes using mixed effect and generalized least square models

    Identifying differentially methylated genes using mixed effect and generalized least square models by Sun, Shuying, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

    Published 2009
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  2. 2
    Construction and evaluation of robust interpretation models for breast cancer metastasis prediction

    Construction and evaluation of robust interpretation models for breast cancer metastasis prediction by Adnan, Nahim, Zand, Maryam, Huang, Tim HM, Ruan, Jianhua

    Published 2022
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  3. 3
    Probe signal correction for differential methylation hybridization experiments

    Probe signal correction for differential methylation hybridization experiments by Potter, Dustin P, Yan, Pearlly, Huang, Tim HM, Lin, Shili

    Published 2008
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  4. 4
    Comparative evaluation of network features for the prediction of breast cancer metastasis

    Comparative evaluation of network features for the prediction of breast cancer metastasis by Adnan, Nahim, Liu, Zhijie, Huang, Tim H.M., Ruan, Jianhua

    Published 2020
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  5. 5
    Preprocessing differential methylation hybridization microarray data

    Preprocessing differential methylation hybridization microarray data by Sun, Shuying, Huang, Yi-Wen, Yan, Pearlly S, Huang, Tim HM, Lin, Shili

    Published 2011
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  6. 6
    A Poisson mixture model to identify changes in RNA polymerase II binding quantity using high-throughput sequencing technology

    A Poisson mixture model to identify changes in RNA polymerase II binding quantity using high-throughput sequencing technology by Feng, Weixing, Liu, Yunlong, Wu, Jiejun, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

    Published 2008
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  7. 7
    Identifying hypermethylated CpG islands using a quantile regression model

    Identifying hypermethylated CpG islands using a quantile regression model by Sun, Shuying, Chen, Zhengyi, Yan, Pearlly S, Huang, Yi-Wen, Huang, Tim HM, Lin, Shili

    Published 2011
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  8. 8
    Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array

    Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array by Singer, Gregory AC, Wu, Jiejun, Yan, Pearlly, Plass, Christoph, Huang, Tim HM, Davuluri, Ramana V

    Published 2008
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  9. 9
    A modulator based regulatory network for ERα signaling pathway

    A modulator based regulatory network for ERα signaling pathway by Wu, Heng-Yi, Zheng, Pengyue, Jiang, Guanglong, Liu, Yunlong, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

    Published 2012
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  10. 10
    QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions

    QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions by Liu, Bin, Yi, Jimmy, SV, Aishwarya, Lan, Xun, Ma, Yilin, Huang, Tim HM, Leone, Gustavo, Jin, Victor X

    Published 2013
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  11. 11
    Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands

    Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands by Dai, Wei, Teodoridis, Jens M, Graham, Janet, Zeller, Constanze, Huang, Tim HM, Yan, Pearlly, Vass, J Keith, Brown, Robert, Paul, Jim

    Published 2008
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  12. 12
    STAT3 can be activated through paracrine signaling in breast epithelial cells

    STAT3 can be activated through paracrine signaling in breast epithelial cells by Lieblein, Jacqueline C, Ball, Sarah, Hutzen, Brian, Sasser, A Kate, Lin, Huey-Jen, Huang, Tim HM, Hall, Brett M, Lin, Jiayuh

    Published 2008
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  13. 13
    Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer

    Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer by Li, Meng, Balch, Curt, Montgomery, John S, Jeong, Mikyoung, Chung, Jae Hoon, Yan, Pearlly, Huang, Tim HM, Kim, Sun, Nephew, Kenneth P

    Published 2009
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  14. 14
    Identification of novel DNA methylation inhibitors via a two-component reporter gene system

    Identification of novel DNA methylation inhibitors via a two-component reporter gene system by Lin, Yi-Shiuan, Shaw, Arthur Y, Wang, Shi-Gang, Hsu, Chia-Chen, Teng, I-Wen, Tseng, Min-Jen, Huang, Tim HM, Chen, Ching-Shih, Leu, Yu-Wei, Hsiao, Shu-Huei

    Published 2011
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  15. 15
    Multivalent epigenetic marks confer microenvironment-responsive epigenetic plasticity to ovarian cancer cells

    Multivalent epigenetic marks confer microenvironment-responsive epigenetic plasticity to ovarian cancer cells by Bapat, Sharmila A, Jin, Victor, Berry, Nicholas, Balch, Curt, Sharma, Neeti, Kurrey, Nawneet, Zhang, Shu, Fang, Fang, Lan, Xun, Li, Meng, Kennedy, Brian, Bigsby, Robert M, Huang, Tim HM, Nephew, Kenneth P

    Published 2010
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  16. 16
    A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer

    A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer by Shen, Changyu, Huang, Yiwen, Liu, Yunlong, Wang, Guohua, Zhao, Yuming, Wang, Zhiping, Teng, Mingxiang, Wang, Yadong, Flockhart, David A, Skaar, Todd C, Yan, Pearlly, Nephew, Kenneth P, Huang, Tim HM, Li, Lang

    Published 2011
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  17. 17
    An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules

    An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules by Qin, Huaxia, Chan, Michael WY, Liyanarachchi, Sandya, Balch, Curtis, Potter, Dustin, Souriraj, Irene J, Cheng, Alfred SL, Agosto-Perez, Francisco J, Nikonova, Elena V, Yan, Pearlly S, Lin, Huey-Jen, Nephew, Kenneth P, Saltz, Joel H, Showe, Louise C, Huang, Tim HM, Davuluri, Ramana V

    Published 2009
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