Search Results - Hidemasa Bono

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  1. 1
    Recent Advances in Genome Editing and Bioinformatics: Addressing Challenges in Genome Editing Implementation and Genome Sequencing

    Recent Advances in Genome Editing and Bioinformatics: Addressing Challenges in Genome Editing Implementation and Genome Sequencing by Hidemasa Bono

    Published 2025
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  2. 2
    Meta-Analysis of Hypoxic Transcriptomes from Public Databases

    Meta-Analysis of Hypoxic Transcriptomes from Public Databases by Hidemasa Bono, Kiichi Hirota

    Published 2020
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  3. 3
    Experimental Design-Based Functional Mining and Characterization of High-Throughput Sequencing Data in the Sequence Read Archive

    Experimental Design-Based Functional Mining and Characterization of High-Throughput Sequencing Data in the Sequence Read Archive by Takeru Nakazato, Tazro Ohta, Hidemasa Bono

    Published 2013
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  4. 4
    Reconstruction of Amino Acid Biosynthesis Pathways from the Complete Genome Sequence

    Reconstruction of Amino Acid Biosynthesis Pathways from the Complete Genome Sequence by Hidemasa Bono, Hiroyuki Ogata, Susumu Goto, Minoru Kanehisa

    Published 1998
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  5. 5
    RefEx, a reference gene expression dataset as a web tool for the functional analysis of genes

    RefEx, a reference gene expression dataset as a web tool for the functional analysis of genes by Hiromasa Ono, Osamu Ogasawara, Kosaku Okubo, Hidemasa Bono

    Published 2017
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  6. 6
    CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites

    CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites by Yuki Naito, Kimihiro Hino, Hidemasa Bono, Kumiko Ui‐Tei

    Published 2014
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  7. 7
    KEGG: Kyoto Encyclopedia of Genes and Genomes

    KEGG: Kyoto Encyclopedia of Genes and Genomes by Hiroyuki Ogata, Susumu Goto, Kazushige Sato, Wataru Fujibuchi, Hidemasa Bono, Minoru Kanehisa

    Published 1999
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  8. 8
    Risk Prediction of RNA Off-Targets of CRISPR Base Editors in Tissue-Specific Transcriptomes Using Language Models

    Risk Prediction of RNA Off-Targets of CRISPR Base Editors in Tissue-Specific Transcriptomes Using Language Models by Kazuki Nakamae, Takayuki Suzuki, Sora Yonezawa, Kentaro Yamamoto, Taro Kakuzaki, Hiromasa Ono, Yuki Naito, Hidemasa Bono

    Published 2025
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  9. 9
    Protein–Protein Interaction Panel Using Mouse Full-Length cDNAs

    Protein–Protein Interaction Panel Using Mouse Full-Length cDNAs by Harukazu Suzuki, Yoshifumi Fukunishi, Ikuko Kagawa, Rintaro Saito, Hiroshi Oda, Toshinori Endo, Shinji Kondo, Hidemasa Bono, Yasushi Okazaki, Yoshihide Hayashizaki

    Published 2001
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  10. 10
    HIF-1-mediated suppression of mitochondria electron transport chain function confers resistance to lidocaine-induced cell death

    HIF-1-mediated suppression of mitochondria electron transport chain function confers resistance to lidocaine-induced cell death by Akihisa Okamoto, Chisato Sumi, Hiromasa Tanaka, M. Kusunoki, Teppei Iwai, Kenichiro Nishi, Yoshiyuki Matsuo, Hiroshi Harada, Keizo Takenaga, Hidemasa Bono, Kiichi Hirota

    Published 2017
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  11. 11
    Gene discovery in genetically labeled single dopaminergic neurons of the retina

    Gene discovery in genetically labeled single dopaminergic neurons of the retina by Stefano Gustincich, Massimo Contini, Manuela Gariboldi, Michelino Puopolo, Koji Kadota, Hidemasa Bono, Julianna LeMieux, Pamela A. Walsh, Piero Carninci, Yoshihide Hayashizaki, Yasushi Okazaki, Elio Raviola

    Published 2004
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  12. 12
    Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling

    Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling by Itoshi Nikaido, Chika Saito, Yosuke Mizuno, Makiko Meguro, Hidemasa Bono, Moritoshi Kadomura, Tomohiro Kono, Gerard A. J. Morris, Paul Lyons, Mitsuo Oshimura, Yoshihide Hayashizaki, Yasushi Okazaki

    Published 2003
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  13. 13
    Superoxide Dismutases, SOD1 and SOD2, Play a Distinct Role in the Fat Body during Pupation in Silkworm Bombyx mori

    Superoxide Dismutases, SOD1 and SOD2, Play a Distinct Role in the Fat Body during Pupation in Silkworm Bombyx mori by Yosui Nojima, Katsuhiko Ito, Hiromasa Ono, Takeru Nakazato, Hidemasa Bono, Takeshi Yokoyama, Ryoichi Sato, Yoshitaka Suetsugu, Yuki Nakamura, Kimiko Yamamoto, Jun‐ichi Satoh, Hiroko Tabunoki, Hajime Fugo

    Published 2015
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  14. 14
    Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution

    Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution by Yoshiyuki Matsuo, Shinnosuke Komiya, Yoshiaki Yasumizu, Yuki Yasuoka, Katsura Mizushima, Tomohisa Takagi, Kirill Kryukov, Aisaku Fukuda, Yoshiharu Morimoto, Yuji Naito, Hidetaka Okada, Hidemasa Bono, So Nakagawa, Kiichi Hirota

    Published 2021
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  15. 15
    Resistance to chemical carcinogenesis induction via a dampened inflammatory response in naked mole-rats

    Resistance to chemical carcinogenesis induction via a dampened inflammatory response in naked mole-rats by Kaori Oka, Shusuke Fujioka, Yoshimi Kawamura, Yoshihiro Komohara, Takeshi Chujo, Koki Sekiguchi, Yuki Yamamura, Yuki Oiwa, Natsuko Ishikawa, Shohei Komaki, Yoichi Sut­oh, Satoko Sakurai, Kazuhito Tomizawa, Hidemasa Bono, Atsushi Shimizu, Kimi Araki, Takuya Yamamoto, Yasuhiro Yamada, Hiroyuki Oshiumi, Kyoko Miura

    Published 2022
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  16. 16
    Id4, a New Candidate Gene for Senile Osteoporosis, Acts as a Molecular Switch Promoting Osteoblast Differentiation

    Id4, a New Candidate Gene for Senile Osteoporosis, Acts as a Molecular Switch Promoting Osteoblast Differentiation by Yoshimi Tokuzawa, Ken Yagi, Yzumi Yamashita, Yutaka Nakachi, Itoshi Nikaido, Hidemasa Bono, Yuichi Ninomiya, Yukiko Kanesaki-Yatsuka, Masumi Akita, Hiromi Motegi, Shigeharu Wakana, Tetsuo Noda, Fred Sablitzky, S Arai, Riki Kurokawa, Toru Fukuda, Takenobu Katagiri, Christian Schönbach, Tatsuo Suda, Yosuke Mizuno, Yasushi Okazaki

    Published 2010
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  17. 17
    Tumour resistance in induced pluripotent stem cells derived from naked mole-rats

    Tumour resistance in induced pluripotent stem cells derived from naked mole-rats by Shingo Miyawaki, Yoshimi Kawamura, Yuki Oiwa, Atsushi Shimizu, Tsuyoshi Hachiya, Hidemasa Bono, Ikuko Koya, Yohei Okada, Takehiro Kimura, Yoshihiro Tsuchiya, Sadafumi Suzuki, Nobuyuki Onishi, Naoko Kuzumaki, Yumi Matsuzaki, Minoru Narita, Eiji Ikeda, Kazuo Okanoya, K. Seino, Hideyuki Saya, Hideyuki Okano, Kyoko Miura

    Published 2016
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  18. 18
    Cellular senescence induction leads to progressive cell death via the INK4a‐RB pathway in naked mole‐rats

    Cellular senescence induction leads to progressive cell death via the INK4a‐RB pathway in naked mole‐rats by Yoshimi Kawamura, Kaori Oka, Takashi Semba, Mayuko Takamori, Yuki Sugiura, Riyo Yamasaki, Yusuke Suzuki, Takeshi Chujo, M Nagase, Yuki Oiwa, Shusuke Fujioka, Sayuri Homma, Yuki Yamamura, Shingo Miyawaki, Minoru Narita, Takaichi Fukuda, Yusuke Sakai, Takatsugu Ishimoto, Kazuhito Tomizawa, Makoto Suematsu, Takuya Yamamoto, Hidemasa Bono, Hideyuki Okano, Kyoko Miura

    Published 2023
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  19. 19
    Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals

    Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals by Marina Lizio, Jayson Harshbarger, Imad Abugessaisa, Shuei Noguchi, Atsushi Kondo, Jessica Severin, Chris Mungall, David J. Arenillas, Anthony Mathelier, Yulia A. Medvedeva, Andreas Lennartsson, Finn Drabløs, Jordan A. Ramilowski, Owen J. L. Rackham, Julian Gough, Robin Andersson, Albin Sandelin, Hans Ienasescu, Hiromasa Ono, Hidemasa Bono, Yoshihide Hayashizaki, Piero Carninci, Alistair R. R. Forrest, Takeya Kasukawa, Hideya Kawaji

    Published 2016
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  20. 20
    Delineating developmental and metabolic pathways<i>in vivo</i>by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays

    Delineating developmental and metabolic pathways<i>in vivo</i>by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays by Rika Miki, Koji Kadota, Hidemasa Bono, Yosuke Mizuno, Yasuhiro Tomaru, Piero Carninci, Masayoshi Itoh, Kazuhiro Shibata, Jun Kawai, Hideaki Konno, Sachihiko Watanabe, Kenjiro Sato, Yumiko Tokusumi, Noriko Kikuchi, Yoshiyuki Ishii, Yohei Hamaguchi, Itaru Nishizuka, Midori Goto, Hiroyuki Nitanda, Susumu Satomi, Atsushi Yoshiki, Moriaki Kusakabe, Joseph L. DeRisi, Michael B. Eisen, V Rajesh Iyer, Patrick O. Brown, Masami Muramatsu, Hiroshi Shimada, Yasushi Okazaki, Yoshihide Hayashizaki

    Published 2001
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