Ohcanbohtosat - Halpern, Aaron L

An MCMC algorithm for haplotype assembly from whole-genome sequence data Dahkki Bansal, Vikas, Halpern, Aaron L., Axelrod, Nelson, Bafna, Vineet

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Characterization of Prochlorococcus clades from iron-depleted oceanic regions Dahkki Rusch, Douglas B., Martiny, Adam C., Dupont, Christopher L., Halpern, Aaron L., Venter, J. Craig

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Nanoliter Reactors Improve Multiple Displacement Amplification of Genomes from Single Cells Dahkki Marcy, Yann, Ishoey, Thomas, Lasken, Roger S, Stockwell, Timothy B, Walenz, Brian P, Halpern, Aaron L, Beeson, Karen Y, Goldberg, Susanne M. D, Quake, Stephen R

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Survey Sequencing and Comparative Analysis of the Elephant Shark (Callorhinchus milii) Genome Dahkki Venkatesh, Byrappa, Kirkness, Ewen F, Loh, Yong-Hwee, Halpern, Aaron L, Lee, Alison P, Johnson, Justin, Dandona, Nidhi, Viswanathan, Lakshmi D, Tay, Alice, Venter, J. Craig, Strausberg, Robert L, Brenner, Sydney

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The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples Dahkki Williamson, Shannon J., Rusch, Douglas B., Yooseph, Shibu, Halpern, Aaron L., Heidelberg, Karla B., Glass, John I., Andrews-Pfannkoch, Cynthia, Fadrosh, Douglas, Miller, Christopher S., Sutton, Granger, Frazier, Marvin, Venter, J. Craig

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Spinal muscular atrophy diagnosis and carrier screening from genome sequencing data Dahkki Chen, Xiao, Sanchis-Juan, Alba, French, Courtney E., Connell, Andrew J., Delon, Isabelle, Kingsbury, Zoya, Chawla, Aditi, Halpern, Aaron L., Taft, Ryan J., Bentley, David R., Butchbach, Matthew E. R., Raymond, F. Lucy, Eberle, Michael A.

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A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree Dahkki Eberle, Michael A., Fritzilas, Epameinondas, Krusche, Peter, Källberg, Morten, Moore, Benjamin L., Bekritsky, Mitchell A., Iqbal, Zamin, Chuang, Han-Yu, Humphray, Sean J., Halpern, Aaron L., Kruglyak, Semyon, Margulies, Elliott H., McVean, Gil, Bentley, David R.

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Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage Dahkki Dupont, Chris L, Rusch, Douglas B, Yooseph, Shibu, Lombardo, Mary-Jane, Alexander Richter, R, Valas, Ruben, Novotny, Mark, Yee-Greenbaum, Joyclyn, Selengut, Jeremy D, Haft, Dan H, Halpern, Aaron L, Lasken, Roger S, Nealson, Kenneth, Friedman, Robert, Craig Venter, J

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CYP2C8, CYP2C9, and CYP2C19 Characterization Using Next-Generation Sequencing and Haplotype Analysis: A GeT-RM Collaborative Project Dahkki Gaedigk, Andrea, Boone, Erin C., Scherer, Steven E., Lee, Seung-been, Numanagić, Ibrahim, Sahinalp, Cenk, Smith, Joshua D., McGee, Sean, Radhakrishnan, Aparna, Qin, Xiang, Wang, Wendy Y., Farrow, Emily G., Gonzaludo, Nina, Halpern, Aaron L., Nickerson, Deborah A., Miller, Neil A., Pratt, Victoria M., Kalman, Lisa V.

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Accurate whole genome sequencing and haplotyping from10-20 human cells Dahkki Peters, Brock A., Kermani, Bahram G., Sparks, Andrew B., Alferov, Oleg, Hong, Peter, Alexeev, Andrei, Jiang, Yuan, Dahl, Fredrik, Tang, Y. Tom, Haas, Juergen, Robasky, Kimberly, Zaranek, Alexander Wait, Lee, Je-Hyuk, Ball, Madeleine Price, Peterson, Joseph E., Perazich, Helena, Yeung, George, Liu, Jia, Chen, Linsu, Kennemer, Michael I., Pothuraju, Kaliprasad, Konvicka, Karel, Tsoupko-Sitnikov, Mike, Pant, Krishna P., Ebert, Jessica C., Nilsen, Geoffrey B., Baccash, Jonathan, Halpern, Aaron L., Church, George M., Drmanac, Radoje

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The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families Dahkki Yooseph, Shibu, Sutton, Granger, Rusch, Douglas B, Halpern, Aaron L, Williamson, Shannon J, Remington, Karin, Eisen, Jonathan A, Heidelberg, Karla B, Manning, Gerard, Li, Weizhong, Jaroszewski, Lukasz, Cieplak, Piotr, Miller, Christopher S, Li, Huiying, Mashiyama, Susan T, Joachimiak, Marcin P, van Belle, Christopher, Chandonia, John-Marc, Soergel, David A, Zhai, Yufeng, Natarajan, Kannan, Lee, Shaun, Raphael, Benjamin J, Bafna, Vineet, Friedman, Robert, Brenner, Steven E, Godzik, Adam, Eisenberg, David, Dixon, Jack E, Taylor, Susan S, Strausberg, Robert L, Frazier, Marvin, Venter, J. Craig

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The Diploid Genome Sequence of an Individual Human Dahkki Levy, Samuel, Sutton, Granger, Ng, Pauline C, Feuk, Lars, Halpern, Aaron L, Walenz, Brian P, Axelrod, Nelson, Huang, Jiaqi, Kirkness, Ewen F, Denisov, Gennady, Lin, Yuan, MacDonald, Jeffrey R, Pang, Andy Wing Chun, Shago, Mary, Stockwell, Timothy B, Tsiamouri, Alexia, Bafna, Vineet, Bansal, Vikas, Kravitz, Saul A, Busam, Dana A, Beeson, Karen Y, McIntosh, Tina C, Remington, Karin A, Abril, Josep F, Gill, John, Borman, Jon, Rogers, Yu-Hui, Frazier, Marvin E, Scherer, Stephen W, Strausberg, Robert L, Venter, J. Craig

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Whole-genome shotgun assembly and comparison of human genome assemblies Dahkki Istrail, Sorin, Sutton, Granger G., Florea, Liliana, Halpern, Aaron L., Mobarry, Clark M., Lippert, Ross, Walenz, Brian, Shatkay, Hagit, Dew, Ian, Miller, Jason R., Flanigan, Michael J., Edwards, Nathan J., Bolanos, Randall, Fasulo, Daniel, Halldorsson, Bjarni V., Hannenhalli, Sridhar, Turner, Russell, Yooseph, Shibu, Lu, Fu, Nusskern, Deborah R., Shue, Bixiong Chris, Zheng, Xiangqun Holly, Zhong, Fei, Delcher, Arthur L., Huson, Daniel H., Kravitz, Saul A., Mouchard, Laurent, Reinert, Knut, Remington, Karin A., Clark, Andrew G., Waterman, Michael S., Eichler, Evan E., Adams, Mark D., Hunkapiller, Michael W., Myers, Eugene W., Venter, J. Craig

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The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific Dahkki Rusch, Douglas B, Halpern, Aaron L, Sutton, Granger, Heidelberg, Karla B, Williamson, Shannon, Yooseph, Shibu, Wu, Dongying, Eisen, Jonathan A, Hoffman, Jeff M, Remington, Karin, Beeson, Karen, Tran, Bao, Smith, Hamilton, Baden-Tillson, Holly, Stewart, Clare, Thorpe, Joyce, Freeman, Jason, Andrews-Pfannkoch, Cynthia, Venter, Joseph E, Li, Kelvin, Kravitz, Saul, Heidelberg, John F, Utterback, Terry, Rogers, Yu-Hui, Falcón, Luisa I, Souza, Valeria, Bonilla-Rosso, Germán, Eguiarte, Luis E, Karl, David M, Sathyendranath, Shubha, Platt, Trevor, Bermingham, Eldredge, Gallardo, Victor, Tamayo-Castillo, Giselle, Ferrari, Michael R, Strausberg, Robert L, Nealson, Kenneth, Friedman, Robert, Frazier, Marvin, Venter, J. Craig

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