Suchergebnisse - Gregor Sturm

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  1. 1
    Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data

    Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data von Gregor Sturm, Tamás Szabó, Georgios Fotakis, Marlene Haider, Dietmar Rieder, Zlatko Trajanoski, Francesca Finotello

    Veröffentlicht 2020
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  2. 2
    Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology

    Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology von Gregor Sturm, Francesca Finotello, Florent Petitprez, Jitao David Zhang, Jan Baumbach, Wolf H. Fridman, Markus List, Tatsiana Aneichyk

    Veröffentlicht 2019
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  3. 3
    Beyond binary: bridging neutrophil diversity to new therapeutic approaches in NSCLC

    Beyond binary: bridging neutrophil diversity to new therapeutic approaches in NSCLC von Lena Horvath, Constanze Puschmann, Alexandra Scheiber, Agnieszka Martowicz, Gregor Sturm, Zlatko Trajanoski, Dominik Wolf‎, Andreas Pircher, Stefan Salcher

    Veröffentlicht 2024
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  4. 4
    Detect tissue heterogeneity in gene expression data with BioQC

    Detect tissue heterogeneity in gene expression data with BioQC von Jitao David Zhang, Klas Hatje, Gregor Sturm, Clemens Broger, Martin Ebeling, Martine Burtin, Fabiola Terzi, Silvia Pomposiello, Laura Badi

    Veröffentlicht 2017
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  5. 5
    CD39 Identifies the CD4+ Tumor-Specific T-cell Population in Human Cancer

    CD39 Identifies the CD4+ Tumor-Specific T-cell Population in Human Cancer von Kim E. Kortekaas, Saskia J. Santegoets, Gregor Sturm, Ilina Ehsan, Sylvia L. van Egmond, Francesca Finotello, Zlatko Trajanoski, Marij J.P. Welters, Mariëtte I.E. van Poelgeest, Sjoerd H. van der Burg

    Veröffentlicht 2020
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  6. 6
    <scp>NKG2A</scp> is a late immune checkpoint on <scp>CD8</scp> T cells and marks repeated stimulation and cell division

    <scp>NKG2A</scp> is a late immune checkpoint on <scp>CD8</scp> T cells and marks repeated stimulation and cell division von Linda Borst, Marjolein Sluijter, Gregor Sturm, Pornpimol Charoentong, Saskia J. Santegoets, Mandy van Gulijk, Marit J van Elsas, Christianne Groeneveldt, Nadine van Montfoort, Francesca Finotello, Zlatko Trajanoski, Szymon M. Kiełbasa, Sjoerd H. van der Burg, Thorbald van Hall

    Veröffentlicht 2021
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  7. 7
    Tumor-specific T cells support chemokine-driven spatial organization of intratumoral immune microaggregates needed for long survival

    Tumor-specific T cells support chemokine-driven spatial organization of intratumoral immune microaggregates needed for long survival von Ziena Abdulrahman, Saskia J. Santegoets, Gregor Sturm, Pornpimol Charoentong, Marieke E. Ijsselsteijn, Antonios Somarakis, Thomas Höllt, Francesca Finotello, Zlatko Trajanoski, Sylvia L. van Egmond, Dana A. M. Mustafa, Marij J.P. Welters, Noel F.C.C. de Miranda, Sjoerd H. van der Burg

    Veröffentlicht 2022
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  8. 8
    High-resolution single-cell atlas reveals diversity and plasticity of tissue-resident neutrophils in non-small cell lung cancer

    High-resolution single-cell atlas reveals diversity and plasticity of tissue-resident neutrophils in non-small cell lung cancer von Stefan Salcher, Gregor Sturm, Lena Horvath, Gerold Untergasser, Christiane Kuempers, Georgios Fotakis, Elisa Panizzolo, Agnieszka Martowicz, Manuel Trebo, Georg Pall, Gabriele Gamerith, Martina Sykora, Florian Augustin, Katja Schmitz, Francesca Finotello, Dietmar Rieder, Sven Perner, Sieghart Sopper, Dominik Wolf‎, Andreas Pircher, Zlatko Trajanoski

    Veröffentlicht 2022
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  9. 9
    CD161 expression and regulation defines rapidly responding effector CD4+ T cells associated with improved survival in HPV16-associated tumors

    CD161 expression and regulation defines rapidly responding effector CD4+ T cells associated with improved survival in HPV16-associated tumors von Chantal L. Duurland, Saskia J. Santegoets, Ziena Abdulrahman, Nikki M. Loof, Gregor Sturm, Tom H Wesselink, Ramon Arens, Sanne Boekestijn, Ilina Ehsan, Mariëtte I.E. van Poelgeest, Francesca Finotello, Hubert Hackl, Zlatko Trajanoski, Peter ten Dijke, Véronique M. Braud, Marij J.P. Welters, Sjoerd H. van der Burg

    Veröffentlicht 2022
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  10. 10
    Single cell dynamics of tumor specificity vs bystander activity in CD8+ T cells define the diverse immune landscapes in colorectal cancer

    Single cell dynamics of tumor specificity vs bystander activity in CD8+ T cells define the diverse immune landscapes in colorectal cancer von Daniel Borràs, Sara Verbandt, Markus Außerhofer, Gregor Sturm, Jinyeong Lim, Gil Arasa Verge, Isaure Vanmeerbeek, Raquel S. Laureano, Jannes Govaerts, Jenny Sprooten, Yourae Hong, Rebecca Wall, Gert De Hertogh, Xavier Sagaert, Gabriele Bislenghi, André D’Hoore, Albert Wolthuis, Francesca Finotello, Woong‐Yang Park, Stefan Naulaerts, Sabine Tejpar, Abhishek D. Garg

    Veröffentlicht 2023
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  11. 11
    Immune cell dynamics deconvoluted by single-cell RNA sequencing in normothermic machine perfusion of the liver

    Immune cell dynamics deconvoluted by single-cell RNA sequencing in normothermic machine perfusion of the liver von Theresa Hautz, Stefan Salcher, Margot Fodor, Gregor Sturm, Susanne Ebner, A. Mair, Manuel Trebo, Gerold Untergasser, Sieghart Sopper, Benno Cardini, Agnieszka Martowicz, Julia Hofmann, Sophia Daum, Marcus Kalb, Thomas Resch, Felix J. Krendl, Annemarie Weißenbacher, Giorgi Otarashvili, P. Obrist, B. Zelger, Dietmar Öfner, Zlatko Trajanoski, Jakob Troppmair, Rupert Oberhuber, Andreas Pircher, Dominik Wolf‎, Stefan Schneeberger

    Veröffentlicht 2023
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  12. 12
    The AIMe registry for artificial intelligence in biomedical research

    The AIMe registry for artificial intelligence in biomedical research von Julian Matschinske, Nicolás Alcaraz, Arriel Benis, Martin Golebiewski, Dominik G. Grimm, Lukas Heumos, Tim Kacprowski, Olga Lazareva, Markus List, Zakaria Louadi, Josch K. Pauling, Nico Pfeifer, Richard Röttger, Veit Schwämmle, Gregor Sturm, Alberto Traverso, Kristel Van Steen, Martiela Vaz de Freitas, Gerda Cristal Villalba Silva, Leonard Wee, Nina K. Wenke, Massimiliano Zanin, Olga Zolotareva, Jan Baumbach, David B. Blumenthal

    Veröffentlicht 2021
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  13. 13
    A gut bacterial signature in blood and liver tissue characterizes cirrhosis and hepatocellular carcinoma

    A gut bacterial signature in blood and liver tissue characterizes cirrhosis and hepatocellular carcinoma von Maria Effenberger, Silvio Waschina, Christina Bronowski, Gregor Sturm, Oronzo Tassiello, Felix Sommer, A Zollner, Christina Watschinger, Felix Grabherr, Ronald Gstir, Christoph Grander, Barbara Enrich, Reto Bale, Daniel Putzer, Angela Djanani, Alexander R. Moschen, Heinz Zoller, Jan Rupp, Stefan Schreiber, Rémy Burcelin, Cornelia Lass‐Flörl, Zlatko Trajanoski, Georg Oberhuber, Philip Rosenstiel, Timon E. Adolph, Konrad Aden, Herbert Tilg

    Veröffentlicht 2023
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  14. 14
    Inducers of the endothelial cell barrier identified through chemogenomic screening in genome-edited hPSC-endothelial cells

    Inducers of the endothelial cell barrier identified through chemogenomic screening in genome-edited hPSC-endothelial cells von Filip Roudnicky, Jitao David Zhang, Bo Kyoung Kim, Nikhil J. Pandya, Yanjun Lan, Lisa Sach-Peltason, Héloïse Ragelle, Pamela Strassburger, Sabine Gruener, Mirjana Lazendic, Sabine Uhles, Franco Revelant, O. Eidam, Gregor Sturm, Verena Kueppers, Klaus Christensen, Leonard D. Goldstein, Manuel Tzouros, Balázs Bánfai, Zora Modrušan, Martin Graf, Christoph Patsch, Mark Burcin, Claas A. Meyer, Peter D. Westenskow, Chad A. Cowan

    Veröffentlicht 2020
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  15. 15
    Pertpy: an end-to-end framework for perturbation analysis

    Pertpy: an end-to-end framework for perturbation analysis von Lukas Heumos, Yuge Ji, L T May, Tessa D. Green, Xinyue Zhang, Xichen Wu, Johannes Ostner, Stefan Peidli, Antonia Schumacher, Karin Hrovatin, Michaela Müller, Faye Chong, Gregor Sturm, Alejandro Tejada, Emma Dann, Mingze Dong, Mojtaba Bahrami, Ilan Gold, Sergei Rybakov, Altana Namsaraeva, Amir Ali Moinfar, Zihe Zheng, Eljas Roellin, Isra Mekki, Chris Sander, Mohammad Lotfollahi, Herbert B. Schiller, Fabian J. Theis

    Veröffentlicht 2024
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