Search Results - Goecks, Jeremy

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  1. 1
    Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

    Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences by Goecks, Jeremy, Nekrutenko, Anton, Taylor, James

    Published 2010
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  2. 2
    Biocompute Objects—A Step towards Evaluation and Validation of Biomedical Scientific Computations

    Biocompute Objects—A Step towards Evaluation and Validation of Biomedical Scientific Computations by Simonyan, Vahan, Goecks, Jeremy, Mazumder, Raja

    Published 2016
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  3. 3
    Turning pipe dreams into reality

    Turning pipe dreams into reality by Li, Peter, Goecks, Jeremy, Lee, Tin-Lap

    Published 2012
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  4. 4
    NGS analyses by visualization with Trackster

    NGS analyses by visualization with Trackster by Goecks, Jeremy, Coraor, Nate, Nekrutenko, Anton, Taylor, James

    Published 2012
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  5. 5
    Cloud bursting galaxy: federated identity and access management

    Cloud bursting galaxy: federated identity and access management by Jalili, Vahid, Afgan, Enis, Taylor, James, Goecks, Jeremy

    Published 2020
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  6. 6
    Web-based visual analysis for high-throughput genomics

    Web-based visual analysis for high-throughput genomics by Goecks, Jeremy, Eberhard, Carl, Too, Tomithy, Nekrutenko, Anton, Taylor, James

    Published 2013
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  7. 7
    Biology Needs Evolutionary Software Tools: Let’s Build Them Right

    Biology Needs Evolutionary Software Tools: Let’s Build Them Right by Nekrutenko, Anton, Team, Galaxy, Goecks, Jeremy, Taylor, James, Blankenberg, Daniel

    Published 2018
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  8. 8
    How Machine Learning will Transform Biomedicine

    How Machine Learning will Transform Biomedicine by Goecks, Jeremy, Jalili, Vahid, Heiser, Laura M., Gray, Joe W.

    Published 2020
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  9. 9
    Federated Galaxy: Biomedical Computing at the Frontier

    Federated Galaxy: Biomedical Computing at the Frontier by Afgan, Enis, Jalili, Vahid, Goonasekera, Nuwan, Taylor, James, Goecks, Jeremy

    Published 2018
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  10. 10
    G-OnRamp: a Galaxy-based platform for collaborative annotation of eukaryotic genomes

    G-OnRamp: a Galaxy-based platform for collaborative annotation of eukaryotic genomes by Liu, Yating, Sargent, Luke, Leung, Wilson, Elgin, Sarah C R, Goecks, Jeremy

    Published 2019
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  11. 11
    Single-cell spatial architectures associated with clinical outcome in head and neck squamous cell carcinoma

    Single-cell spatial architectures associated with clinical outcome in head and neck squamous cell carcinoma by Blise, Katie E., Sivagnanam, Shamilene, Banik, Grace L., Coussens, Lisa M., Goecks, Jeremy

    Published 2022
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  12. 12
    Integrative Approach Reveals Composition of Endoparasitoid Wasp Venoms

    Integrative Approach Reveals Composition of Endoparasitoid Wasp Venoms by Goecks, Jeremy, Mortimer, Nathan T., Mobley, James A., Bowersock, Gregory J., Taylor, James, Schlenke, Todd A.

    Published 2013
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  13. 13
    G-OnRamp: Generating genome browsers to facilitate undergraduate-driven collaborative genome annotation

    G-OnRamp: Generating genome browsers to facilitate undergraduate-driven collaborative genome annotation by Sargent, Luke, Liu, Yating, Leung, Wilson, Mortimer, Nathan T., Lopatto, David, Goecks, Jeremy, Elgin, Sarah C. R.

    Published 2020
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  14. 14
    The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update

    The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update by Jalili, Vahid, Afgan, Enis, Gu, Qiang, Clements, Dave, Blankenberg, Daniel, Goecks, Jeremy, Taylor, James, Nekrutenko, Anton

    Published 2020
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  15. 15
    The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update

    The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update by Jalili, Vahid, Afgan, Enis, Gu, Qiang, Clements, Dave, Blankenberg, Daniel, Goecks, Jeremy, Taylor, James, Nekrutenko, Anton

    Published 2020
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  16. 16
    Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine

    Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine by Gu, Qiang, Kumar, Anup, Bray, Simon, Creason, Allison, Khanteymoori, Alireza, Jalili, Vahid, Grüning, Björn, Goecks, Jeremy

    Published 2021
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  17. 17
    The Bioinformatics Open Source Conference (BOSC) 2013

    The Bioinformatics Open Source Conference (BOSC) 2013 by Harris, Nomi L., Cock, Peter J. A., Chapman, Brad A., Goecks, Jeremy, Hotz, Hans-Rudolf, Lapp, Hilmar

    Published 2015
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  18. 18
    Open pipelines for integrated tumor genome profiles reveal differences between pancreatic cancer tumors and cell lines

    Open pipelines for integrated tumor genome profiles reveal differences between pancreatic cancer tumors and cell lines by Goecks, Jeremy, El-Rayes, Bassel F, Maithel, Shishir K, Khoury, H Jean, Taylor, James, Rossi, Michael R

    Published 2015
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  19. 19
    Parasitoid wasp venom SERCA regulates Drosophila calcium levels and inhibits cellular immunity

    Parasitoid wasp venom SERCA regulates Drosophila calcium levels and inhibits cellular immunity by Mortimer, Nathan T., Goecks, Jeremy, Kacsoh, Balint Z., Mobley, James A., Bowersock, Gregory J., Taylor, James, Schlenke, Todd A.

    Published 2013
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  20. 20
    A long-read RNA-seq approach to identify novel transcripts of very large genes

    A long-read RNA-seq approach to identify novel transcripts of very large genes by Uapinyoying, Prech, Goecks, Jeremy, Knoblach, Susan M., Panchapakesan, Karuna, Bonnemann, Carsten G., Partridge, Terence A., Jaiswal, Jyoti K., Hoffman, Eric P.

    Published 2020
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