Výsledky vyhledávání - Gerald Quon

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  1. 1
    scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data

    scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data Autor Nelson Johansen, Gerald Quon

    Vydáno 2019
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  2. 2
    siVAE: interpretable deep generative models for single-cell transcriptomes

    siVAE: interpretable deep generative models for single-cell transcriptomes Autor Yongin Choi, Ruoxin Li, Gerald Quon

    Vydáno 2023
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  3. 3
    Patterns of methylation heritability in a genome-wide analysis of four brain regions

    Patterns of methylation heritability in a genome-wide analysis of four brain regions Autor Gerald Quon, Christoph Lippert, David Heckerman, Jennifer Listgarten

    Vydáno 2013
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  4. 4
    Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure

    Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure Autor Xiao Li, Gerald Quon, Howard D. Lipshitz, Quaid Morris

    Vydáno 2010
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  5. 5
    Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases

    Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases Autor Daniel Marbach, David Lamparter, Gerald Quon, Manolis Kellis, Zoltán Kutalik, Sven Bergmann

    Vydáno 2016
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  6. 6
    PERT: A Method for Expression Deconvolution of Human Blood Samples from Varied Microenvironmental and Developmental Conditions

    PERT: A Method for Expression Deconvolution of Human Blood Samples from Varied Microenvironmental and Developmental Conditions Autor Wenlian Qiao, Gerald Quon, Elizabeth Csaszar, Mei Yu, Quaid Morris, Peter W. Zandstra

    Vydáno 2012
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  7. 7
    The benefits of selecting phenotype-specific variants for applications of mixed models in genomics

    The benefits of selecting phenotype-specific variants for applications of mixed models in genomics Autor Christoph Lippert, Gerald Quon, Eun Yong Kang, Carl Kadie, Jennifer Listgarten, David Heckerman

    Vydáno 2013
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  8. 8
    Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction

    Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction Autor Gerald Quon, Syed Haider, Amit G. Deshwar, Ang Cui, Paul C. Boutros, Quaid Morris

    Vydáno 2013
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  9. 9
    Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease

    Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease Autor Elizabeta Gjoneska, Andreas Pfenning, Hansruedi Mathys, Gerald Quon, Anshul Kundaje, Li-Huei Tsai, Manolis Kellis

    Vydáno 2015
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  10. 10
    Pegasys: software for executing and integrating analyses of biological sequences

    Pegasys: software for executing and integrating analyses of biological sequences Autor Sohrab P. Shah, David He, J. Sawkins, Jeffrey C Druce, Gerald Quon, Drew Lett, Grace X. Y. Zheng, Tao Xu, B. F. Francis Ouellette

    Vydáno 2004
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  11. 11
    Conservation of core gene expression in vertebrate tissues

    Conservation of core gene expression in vertebrate tissues Autor Esther T. Chan, Gerald Quon, Gordon Chua, Tomas Babak, Miles Trochesset, Ralph Zirngibl, Jane E. Aubin, Michael J. H. Ratcliffe, Andrew Wilde, Michael Brudno, Quaid Morris, Timothy R. Hughes

    Vydáno 2009
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  12. 12
    Systems-Level Properties of EGFR-RAS-ERK Signaling Amplify Local Signals to Generate Dynamic Gene Expression Heterogeneity

    Systems-Level Properties of EGFR-RAS-ERK Signaling Amplify Local Signals to Generate Dynamic Gene Expression Heterogeneity Autor Alexander E. Davies, Michael Pargett, Stefan Siebert, Taryn E. Gillies, Yongin Choi, Savannah J. Tobin, Abhineet Ram, Vaibhav Murthy, Celina E. Juliano, Gerald Quon, Mina J. Bissell, John G. Albeck

    Vydáno 2020
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  13. 13
    <i>FTO</i> Obesity Variant Circuitry and Adipocyte Browning in Humans

    <i>FTO</i> Obesity Variant Circuitry and Adipocyte Browning in Humans Autor Melina Claussnitzer, Simon N. Dankel, Kyoung-Han Kim, Gerald Quon, Wouter Meuleman, Christine E. Haugen, Viktoria Glunk, Isabel Sousa, Jacqueline L. Beaudry, Vijitha Puviindran, Nezar Abdennur, Jannel Liu, Per‐Arne Svensson, Yi-Hsiang Hsu, Daniel J. Drucker, Gunnar Mellgren, Chi-chung Hui, Hans Hauner, Manolis Kellis

    Vydáno 2015
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  14. 14
    Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research

    Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research Autor Colin Kern, Ying Wang, Xiaoqin Xu, Zhangyuan Pan, Michelle M. Halstead, Ganrea Chanthavixay, Perot Saelao, Susan Waters, Ruidong Xiang, Amanda J. Chamberlain, Ian Korf, Mary E. Delany, Hans H. Cheng, Juan F. Medrano, Alison L. Van Eenennaam, Chris K Tuggle, Catherine W. Ernst, Paul Flicek, Gerald Quon, Pablo J. Ross, Huaijun Zhou

    Vydáno 2021
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  15. 15
    Local genetic effects on gene expression across 44 human tissues

    Local genetic effects on gene expression across 44 human tissues Autor François Aguet, Andrew Brown, Stephane E. Castel, Joe R. Davis, Pejman Mohammadi, Ayellet V. Segrè, Zachary Zappala, Nathan S. Abell, Laure Frésard, Eric R. Gamazon, Ellen Gelfand, Michael J. Gloudemans, Yuan He, Farhad Hormozdiari, Xiao Li, Xin Li, Boxiang Liu, Diego Garrido-Martín, Halit Ongen, John Palowitch, YoSon Park, Christine B. Peterson, Gerald Quon, Stephan Ripke, Andrey A. Shabalin, Tyler C. Shimko, Benjamin J. Strober, Timothy J. Sullivan, Nicole A. Teran, Emily K. Tsang, Hailei Zhang, Yi‐Hui Zhou, Alexis Battle, Carlos D. Bustamonte, Nancy J. Cox, Barbara E. Engelhardt, Eleazar Eskin, Gad Getz, Manolis Kellis, Gen Li, Daniel G. MacArthur, Andrew B. Nobel, Chiara Sabbati, Xiaoquan Wen, Fred A. Wright, Tuuli Lappalainen, Kristin Ardlie, Emmanouil T. Dermitzakis, Christopher D. Brown, Stephen B. Montgomery

    Vydáno 2016
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  16. 16
    Conserved cell types with divergent features in human versus mouse cortex

    Conserved cell types with divergent features in human versus mouse cortex Autor Rebecca D. Hodge, Trygve E. Bakken, Jeremy A. Miller, Kimberly A. Smith, Eliza Barkan, Lucas T. Graybuck, Jennie Close, Brian Long, Nelson Johansen, Osnat Penn, Zizhen Yao, Jeroen Eggermont, Thomas Höllt, Boaz P. Levi, Soraya I. Shehata, Brian D. Aevermann, Allison Beller, Darren Bertagnolli, Krissy Brouner, Tamara Casper, Charles Cobbs, Rachel Dalley, Nick Dee, Song‐Lin Ding, Richard G. Ellenbogen, Olivia Fong, Emma Garren, Jeff Goldy, Ryder P. Gwinn, Daniel Hirschstein, C. Dirk Keene, Mohamed Keshk, Andrew L. Ko, Kanan Lathia, Ahmed Mahfouz, Zoe Maltzer, Mary McGraw, Thuc Nghi Nguyen, Julie Nyhus, Jeffrey G. Ojemann, Aaron Oldre, Sheana Parry, Shannon Reynolds, Christine Rimorin, Nadiya V. Shapovalova, Saroja Somasundaram, Aaron Szafer, Elliot R. Thomsen, Michael Tieu, Gerald Quon, Richard H. Scheuermann, Rafael Yuste, Susan M. Sunkin, Boudewijn P. F. Lelieveldt, David Feng, Lydia Ng, Amy Bernard, Michael Hawrylycz, John W. Phillips, Bosiljka Tasic, Hongkui Zeng, Allan R. Jones, Christof Koch, Ed S. Lein

    Vydáno 2019
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  17. 17
    Integrative analysis of 111 reference human epigenomes

    Integrative analysis of 111 reference human epigenomes Autor Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi‐Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald Quon, Richard Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaïck Carles, Jesse R. Dixon, Kai-How Farh, Soheil Feizi, Rosa Karlić, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard Sallari, Kyle Siebenthall, Nicholas A. Sinnott‐Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy Farnham, Susan J. Fisher, David Haussler, Steven J.M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil Sunyaev, James A. Thomson, Thea D. Tlsty, Linus Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, B Bernstein, J Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljević, Bing Ren, J Stamatoyannopoulos, Ting Wang, Manolis Kellis

    Vydáno 2015
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