Search Results - Gábor Marth

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  1. 1
    Haplotype-based variant detection from short-read sequencing

    Haplotype-based variant detection from short-read sequencing by Erik Garrison, Gábor Marth

    Published 2012
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  2. 2
    EagleView: A genome assembly viewer for next-generation sequencing technologies

    EagleView: A genome assembly viewer for next-generation sequencing technologies by Weichun Huang, Gábor Marth

    Published 2008
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    Artigo
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  3. 3
    The Allele Frequency Spectrum in Genome-Wide Human Variation Data Reveals Signals of Differential Demographic History in Three Large World Populations

    The Allele Frequency Spectrum in Genome-Wide Human Variation Data Reveals Signals of Differential Demographic History in Three Large World Populations by Gábor Marth, Éva Czabarka, János Murvai, Stephen T. Sherry

    Published 2004
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  4. 4
    SSW Library: An SIMD Smith-Waterman C/C++ Library for Use in Genomic Applications

    SSW Library: An SIMD Smith-Waterman C/C++ Library for Use in Genomic Applications by Mengyao Zhao, Wan-Ping Lee, Erik Garrison, Gábor Marth

    Published 2013
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  5. 5
    ART: a next-generation sequencing read simulator

    ART: a next-generation sequencing read simulator by Weichun Huang, Leping Li, Jason R. Myers, Gábor Marth

    Published 2011
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  6. 6
    Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression

    Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression by Michele Busby, Chip Stewart, Chase Miller, Krzysztof R. Grzȩda, Gábor Marth

    Published 2013
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  7. 7
    bam.iobio: a web-based, real-time, sequence alignment file inspector

    bam.iobio: a web-based, real-time, sequence alignment file inspector by Chase Miller, 義行 高橋, Tonya DiSera, Brian D'Astous, Gábor Marth

    Published 2014
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  8. 8
    MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

    MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping by Wan-Ping Lee, Michael P. Strömberg, Alistair Ward, Chip Stewart, Erik Garrison, Gábor Marth

    Published 2014
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  9. 9
    BamTools: a C++ API and toolkit for analyzing and managing BAM files

    BamTools: a C++ API and toolkit for analyzing and managing BAM files by Derek W. Barnett, Erik K. Garrison, Aaron R. Quinlan, Michael P. Strömberg, Gábor Marth

    Published 2011
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  10. 10
    SubcloneSeeker: a computational framework for reconstructing tumor clone structure for cancer variant interpretation and prioritization

    SubcloneSeeker: a computational framework for reconstructing tumor clone structure for cancer variant interpretation and prioritization by Yi Qiao, Aaron R. Quinlan, Amir A. Jazaeri, Roeland Verhaak, David A. Wheeler, Gábor Marth

    Published 2014
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  11. 11
    GIGGLE: a search engine for large-scale integrated genome analysis

    GIGGLE: a search engine for large-scale integrated genome analysis by Ryan M. Layer, Brent S. Pedersen, Tonya DiSera, Gábor Marth, Jason Gertz, Aaron R. Quinlan

    Published 2018
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  12. 12
    Targeted proteomic dissection of <i>Toxoplasma</i> cytoskeleton sub‐compartments using MORN1

    Targeted proteomic dissection of <i>Toxoplasma</i> cytoskeleton sub‐compartments using MORN1 by Alexander Lorestani, F. Douglas Ivey, Sivasakthivel Thirugnanam, Michele Busby, Gábor Marth, Iain M. Cheeseman, Marc‐Jan Gubbels

    Published 2012
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  13. 13
    Tangram: a comprehensive toolbox for mobile element insertion detection

    Tangram: a comprehensive toolbox for mobile element insertion detection by Jiantao Wu, Wan-Ping Lee, Alistair Ward, Jerilyn A. Walker, Miriam K. Konkel, Mark A. Batzer, Gábor Marth

    Published 2014
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  14. 14
    The Sequence Alignment/Map format and SAMtools

    The Sequence Alignment/Map format and SAMtools by Heng Li, Robert E. Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gábor Marth, Gonçalo R. Abecasis, Richard Durbin

    Published 2009
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  15. 15
    A standard variation file format for human genome sequences

    A standard variation file format for human genome sequences by Martin G. Reese, Barry Moore, Colin Batchelor, Fidel Salas, Fiona Cunningham, Gábor Marth, Lincoln Stein, Paul Flicek, Mark Yandell, Karen Eilbeck

    Published 2010
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  16. 16
    Genetic basis for phenotypic differences between different Toxoplasma gondii type I strains

    Genetic basis for phenotypic differences between different Toxoplasma gondii type I strains by Ninghan Yang, Andrew Farrell, Wendy Niedelman, Mariane B. Melo, Diana Lu, Lindsay Julien, Gábor Marth, Marc‐Jan Gubbels, Jeroen P. J. Saeij

    Published 2013
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  17. 17
    An integrated map of genetic variation from 1,092 human genomes

    An integrated map of genetic variation from 1,092 human genomes by Gonçalo R. Abecasis, Adam Auton, Lisa Brooks, Mark A. DePristo, Richard Durbin, Robert E. Handsaker, Jin Yu, Gábor Marth, Gil McVean

    Published 2012
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  18. 18
    SpeedSeq: ultra-fast personal genome analysis and interpretation

    SpeedSeq: ultra-fast personal genome analysis and interpretation by Colby Chiang, Ryan M. Layer, Gregory G. Faust, Michael Lindberg, David B Rose, Erik Garrison, Gábor Marth, Aaron R. Quinlan, Ira M. Hall

    Published 2015
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  19. 19
    Somalier: rapid relatedness estimation for cancer and germline studies using efficient genome sketches

    Somalier: rapid relatedness estimation for cancer and germline studies using efficient genome sketches by Brent S. Pedersen, Preetida J. Bhetariya, Joe Brown, Stephanie N. Kravitz, Gábor Marth, Randy L. Jensen, Mary P. Bronner, Hunter R. Underhill, Aaron R. Quinlan

    Published 2020
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  20. 20
    A DOC2 Protein Identified by Mutational Profiling Is Essential for Apicomplexan Parasite Exocytosis

    A DOC2 Protein Identified by Mutational Profiling Is Essential for Apicomplexan Parasite Exocytosis by Andrew Farrell, Sivasakthivel Thirugnanam, Alexander Lorestani, Jeffrey D. Dvorin, Keith P. Eidell, David Ferguson, Brooke R. Anderson‐White, Manoj T. Duraisingh, Gábor Marth, Marc‐Jan Gubbels

    Published 2012
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