Search Results - Friedel, Caroline C.

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  1. 1
    Computational Analysis of Virus–Host Interactomes

    Computational Analysis of Virus–Host Interactomes by Friedel, Caroline C.

    Published 2013
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  2. 2
    Inferring topology from clustering coefficients in protein-protein interaction networks

    Inferring topology from clustering coefficients in protein-protein interaction networks by Friedel, Caroline C, Zimmer, Ralf

    Published 2006
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  3. 3
    Influence of degree correlations on network structure and stability in protein-protein interaction networks

    Influence of degree correlations on network structure and stability in protein-protein interaction networks by Friedel, Caroline C, Zimmer, Ralf

    Published 2007
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  4. 4
    Identifying the topology of protein complexes from affinity purification assays

    Identifying the topology of protein complexes from affinity purification assays by Friedel, Caroline C., Zimmer, Ralf

    Published 2009
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  5. 5
    A Comprehensive Evaluation of Alignment Algorithms in the Context of RNA-Seq

    A Comprehensive Evaluation of Alignment Algorithms in the Context of RNA-Seq by Lindner, Robert, Friedel, Caroline C.

    Published 2012
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  6. 6
    Prediction of Poly(A) Sites by Poly(A) Read Mapping

    Prediction of Poly(A) Sites by Poly(A) Read Mapping by Bonfert, Thomas, Friedel, Caroline C.

    Published 2017
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  7. 7
    Watchdog – a workflow management system for the distributed analysis of large-scale experimental data

    Watchdog – a workflow management system for the distributed analysis of large-scale experimental data by Kluge, Michael, Friedel, Caroline C.

    Published 2018
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  8. 8
    FERN – a Java framework for stochastic simulation and evaluation of reaction networks

    FERN – a Java framework for stochastic simulation and evaluation of reaction networks by Erhard, Florian, Friedel, Caroline C, Zimmer, Ralf

    Published 2008
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  9. 9
    A context-based approach to identify the most likely mapping for RNA-seq experiments

    A context-based approach to identify the most likely mapping for RNA-seq experiments by Bonfert, Thomas, Csaba, Gergely, Zimmer, Ralf, Friedel, Caroline C

    Published 2012
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  10. 10
    Detection and correction of probe-level artefacts on microarrays

    Detection and correction of probe-level artefacts on microarrays by Petri, Tobias, Berchtold, Evi, Zimmer, Ralf, Friedel, Caroline C

    Published 2012
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  11. 11
    Mining RNA–Seq Data for Infections and Contaminations

    Mining RNA–Seq Data for Infections and Contaminations by Bonfert, Thomas, Csaba, Gergely, Zimmer, Ralf, Friedel, Caroline C.

    Published 2013
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  12. 12
    Real-time Analysis of Transcription Factor Binding, Transcription, Translation, and Turnover to Display Global Events During Cellular Activation

    Real-time Analysis of Transcription Factor Binding, Transcription, Translation, and Turnover to Display Global Events During Cellular Activation by Davari, Kathrin, Lichti, Johannes, Friedel, Caroline C., Glasmacher, Elke

    Published 2018
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  13. 13
    Quantitative proteomics of the integrin adhesome show a myosin II-dependent recruitment of LIM domain proteins

    Quantitative proteomics of the integrin adhesome show a myosin II-dependent recruitment of LIM domain proteins by Schiller, Herbert B, Friedel, Caroline C, Boulegue, Cyril, Fässler, Reinhard

    Published 2011
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  14. 14
    ContextMap 2: fast and accurate context-based RNA-seq mapping

    ContextMap 2: fast and accurate context-based RNA-seq mapping by Bonfert, Thomas, Kirner, Evelyn, Csaba, Gergely, Zimmer, Ralf, Friedel, Caroline C

    Published 2015
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  15. 15
    Watchdog 2.0: New developments for reusability, reproducibility, and workflow execution

    Watchdog 2.0: New developments for reusability, reproducibility, and workflow execution by Kluge, Michael, Friedl, Marie-Sophie, Menzel, Amrei L, Friedel, Caroline C

    Published 2020
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  16. 16
    Conserved principles of mammalian transcriptional regulation revealed by RNA half-life

    Conserved principles of mammalian transcriptional regulation revealed by RNA half-life by Friedel, Caroline C., Dölken, Lars, Ruzsics, Zsolt, Koszinowski, Ulrich H., Zimmer, Ralf

    Published 2009
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  17. 17
    Clonal Expansion Analysis of Transposon Insertions by High-Throughput Sequencing Identifies Candidate Cancer Genes in a PiggyBac Mutagenesis Screen

    Clonal Expansion Analysis of Transposon Insertions by High-Throughput Sequencing Identifies Candidate Cancer Genes in a PiggyBac Mutagenesis Screen by Friedel, Roland H., Friedel, Caroline C., Bonfert, Thomas, Shi, Ruijin, Rad, Roland, Soriano, Philippe

    Published 2013
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  18. 18
    Metabolic Labeling of Newly Transcribed RNA for High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay in Cell Culture

    Metabolic Labeling of Newly Transcribed RNA for High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay in Cell Culture by Rädle, Bernd, Rutkowski, Andrzej J., Ruzsics, Zsolt, Friedel, Caroline C., Koszinowski, Ulrich H., Dölken, Lars

    Published 2013
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  19. 19
    Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of small molecule inhibitor JQ1

    Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of small molecule inhibitor JQ1 by Decker, Tim-Michael, Kluge, Michael, Krebs, Stefan, Shah, Nilay, Blum, Helmut, Friedel, Caroline C., Eick, Dirk

    Published 2017
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  20. 20
    Genome-Wide Assessment of AU-Rich Elements by the AREScore Algorithm

    Genome-Wide Assessment of AU-Rich Elements by the AREScore Algorithm by Spasic, Milan, Friedel, Caroline C., Schott, Johanna, Kreth, Jochen, Leppek, Kathrin, Hofmann, Sarah, Ozgur, Sevim, Stoecklin, Georg

    Published 2012
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