Risultati della ricerca - Francesc Coll

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  1. 1
    Imputation-Based Population Genetics Analysis of Plasmodium falciparum Malaria Parasites

    Imputation-Based Population Genetics Analysis of Plasmodium falciparum Malaria Parasites di Hanif Samad, Francesc Coll, Mark D. Preston, Harold Ocholla, Rick M. Fairhurst, Taane G. Clark

    Pubblicazione 2015
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  2. 2
    SpolPred: rapid and accurate prediction of <i>Mycobacterium tuberculosis</i> spoligotypes from short genomic sequences

    SpolPred: rapid and accurate prediction of <i>Mycobacterium tuberculosis</i> spoligotypes from short genomic sequences di Francesc Coll, Kim Mallard, Mark D. Preston, Stephen D. Bentley, Julian Parkhill, Ruth McNerney, Nigel Martin, Taane G. Clark

    Pubblicazione 2012
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  3. 3
    Whole Genome Sequencing Based Characterization of Extensively Drug-Resistant Mycobacterium tuberculosis Isolates from Pakistan

    Whole Genome Sequencing Based Characterization of Extensively Drug-Resistant Mycobacterium tuberculosis Isolates from Pakistan di Asho Ali, Zahra Hasan, Ruth McNerney, Kim Mallard, Grant Hill-Cawthorne, Francesc Coll, Mridul Nair, Arnab Pain, Taane G. Clark, Rumina Hasan

    Pubblicazione 2015
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  4. 4
    Transient Silencing of Antibiotic Resistance by Mutation Represents a Significant Potential Source of Unanticipated Therapeutic Failure

    Transient Silencing of Antibiotic Resistance by Mutation Represents a Significant Potential Source of Unanticipated Therapeutic Failure di Louise Kime, Christopher P. Randall, Frank I. Banda, Francesc Coll, John D. Wright, Joseph Richardson, Joanna Empel, Julian Parkhill, Alex J. O’Neill

    Pubblicazione 2019
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  5. 5
    A robust SNP barcode for typing Mycobacterium tuberculosis complex strains

    A robust SNP barcode for typing Mycobacterium tuberculosis complex strains di Francesc Coll, Ruth McNerney, José Afonso Guerra‐Assunção, Judith R. Glynn, João Perdigão, Miguel Viveiros, Isabel Portugal, Arnab Pain, Nigel Martin, Taane G. Clark

    Pubblicazione 2014
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  6. 6
    Complex Routes of Nosocomial Vancomycin-Resistant Enterococcus faecium Transmission Revealed by Genome Sequencing

    Complex Routes of Nosocomial Vancomycin-Resistant Enterococcus faecium Transmission Revealed by Genome Sequencing di Kathy E. Raven, Theodore Gouliouris, Hayley J. Brodrick, Francesc Coll, Nicholas M. Brown, Rosy Reynolds, Sandra Reuter, M. Estée Török, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2017
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  7. 7
    Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis

    Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis di Francesc Coll, Kathy E. Raven, Gwenan M. Knight, Beth Blane, Ewan M. Harrison, Danielle Leek, David Enoch, Nicholas M. Brown, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2020
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  8. 8
    Defining nosocomial transmission of Escherichia coli and antimicrobial resistance genes: a genomic surveillance study

    Defining nosocomial transmission of Escherichia coli and antimicrobial resistance genes: a genomic surveillance study di Catherine Ludden, Francesc Coll, Theodore Gouliouris, Olivier Restif, Beth Blane, Grace A. Blackwell, Narender Kumar, Plamena Naydenova, Charles Crawley, Nicholas M. Brown, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2021
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  9. 9
    Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events

    Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events di Dorota Jamrozy, Francesc Coll, Alison E. Mather, Simon R. Harris, Ewan M. Harrison, Alasdair MacGowan, Andreas Karas, Tony Elston, M. Estée Török, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2017
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  10. 10
    The mutational landscape of Staphylococcus aureus during colonisation

    The mutational landscape of Staphylococcus aureus during colonisation di Francesc Coll, Beth Blane, Katie Bellis, Marta Matuszewska, Toska Wonfor, Dorota Jamrozy, Michelle S. Toleman, Joan A. Geoghegan, Julian Parkhill, Ruth C. Massey, Sharon J. Peacock, Ewan M. Harrison

    Pubblicazione 2025
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  11. 11
    Detection of vancomycin-resistant <i>Enterococcus faecium</i> hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment

    Detection of vancomycin-resistant <i>Enterococcus faecium</i> hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into... di Theodore Gouliouris, Kathy E. Raven, Danesh Moradigaravand, Catherine Ludden, Francesc Coll, Beth Blane, Plamena Naydenova, Carolyne Horner, Nicholas M. Brown, Jukka Corander, Direk Limmathurotsakul, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2019
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  12. 12
    Sharing of carbapenemase-encoding plasmids between Enterobacteriaceae in UK sewage uncovered by MinION sequencing

    Sharing of carbapenemase-encoding plasmids between Enterobacteriaceae in UK sewage uncovered by MinION sequencing di Catherine Ludden, Sandra Reuter, Kim Judge, Theodore Gouliouris, Beth Blane, Francesc Coll, Plamena Naydenova, Martin Hunt, Alan Tracey, Katie L. Hopkins, Nicholas M. Brown, Neil Woodford, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2017
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  13. 13
    Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community

    Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community di Francesc Coll, Ewan M. Harrison, Michelle S. Toleman, Sandra Reuter, Kathy E. Raven, Beth Blane, Beverley Palmer, A. Ruth M. Kappeler, Nicholas M. Brown, M. Estée Török, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2017
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  14. 14
    Quantifying acquisition and transmission of Enterococcus faecium using genomic surveillance

    Quantifying acquisition and transmission of Enterococcus faecium using genomic surveillance di Theodore Gouliouris, Francesc Coll, Catherine Ludden, Beth Blane, Kathy E. Raven, Plamena Naydenova, Charles Crawley, M. Estée Török, David Enoch, Nicholas M. Brown, Ewan M. Harrison, Julian Parkhill, Sharon J. Peacock

    Pubblicazione 2020
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  15. 15
    Large-scale whole genome sequencing of M. tuberculosis provides insights into transmission in a high prevalence area

    Large-scale whole genome sequencing of M. tuberculosis provides insights into transmission in a high prevalence area di José Afonso Guerra‐Assunção, Amelia C. Crampin, RMGJ Houben, Themba Mzembe, Kim Mallard, Francesc Coll, Palwasha Khan, Louis Banda, Arthur Chiwaya, RPA Pereira, Ruth McNerney, PEM Fine, Julian Parkhill, Taane G. Clark, JR Glynn

    Pubblicazione 2015
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  16. 16
    Unraveling Mycobacterium tuberculosis genomic diversity and evolution in Lisbon, Portugal, a highly drug resistant setting

    Unraveling Mycobacterium tuberculosis genomic diversity and evolution in Lisbon, Portugal, a highly drug resistant setting di João Perdigão, Hugo Silva, Diana Machado, Rita Macedo, Fernando Maltêz, Carla Silva, Luísa Jordão, Isabel Couto, Kim Mallard, Francesc Coll, Grant Hill-Cawthorne, Ruth McNerney, Arnab Pain, Taane G. Clark, Miguel Viveiros, Isabel Portugal

    Pubblicazione 2014
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  17. 17
    Transmission of methicillin-resistant Staphylococcus aureus in long-term care facilities and their related healthcare networks

    Transmission of methicillin-resistant Staphylococcus aureus in long-term care facilities and their related healthcare networks di Ewan M. Harrison, Catherine Ludden, Hayley J. Brodrick, Beth Blane, Gráinne I. Brennan, Dearbháile Morris, Francesc Coll, Sandra Reuter, Nicholas M. Brown, Mark A. Holmes, Brian O’Connell, Julian Parkhill, M. Estée Török, Martin Cormican, Sharon J. Peacock

    Pubblicazione 2016
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  18. 18
    PolyTB: A genomic variation map for Mycobacterium tuberculosis

    PolyTB: A genomic variation map for Mycobacterium tuberculosis di Francesc Coll, Mark D. Preston, José Afonso Guerra‐Assunção, Grant Hill-Cawthorne, David Harris, João Perdigão, Miguel Viveiros, Isabel Portugal, Francis Drobniewski, Sébastien Gagneux, Judith R. Glynn, Arnab Pain, Julian Parkhill, Ruth McNerney, Nigel Martin, Taane G. Clark

    Pubblicazione 2014
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  19. 19
    Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance

    Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance di Jody Phelan, Francesc Coll, Ruth McNerney, David B. Ascher, Douglas E. V. Pires, Nicholas Furnham, Nele Coeck, Grant Hill-Cawthorne, Mridul Nair, Kim Mallard, Andrew Ramsay, Susana Campino, Martin L. Hibberd, Arnab Pain, Leen Rigouts, Taane G. Clark

    Pubblicazione 2016
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  20. 20
    Recurrence due to Relapse or Reinfection With<i>Mycobacterium tuberculosis</i>: A Whole-Genome Sequencing Approach in a Large, Population-Based Cohort With a High HIV Infection Prevalence and Active Follow-up

    Recurrence due to Relapse or Reinfection With<i>Mycobacterium tuberculosis</i>: A Whole-Genome Sequencing Approach in a Large, Population-Based Cohort With a High HIV Infection Pre... di José Afonso Guerra‐Assunção, Rein M G J Houben, Amelia C. Crampin, Themba Mzembe, Kim Mallard, Francesc Coll, Palwasha Khan, Louis Banda, Arthur Chiwaya, Rui P. A. Pereira, Ruth McNerney, David Harris, Julian Parkhill, Taane G. Clark, Judith R. Glynn

    Pubblicazione 2014
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