Rezultati - Filomena Matarese

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  1. 1
    5‐Hydroxymethylcytosine: a new kid on the epigenetic block?

    5‐Hydroxymethylcytosine: a new kid on the epigenetic block? od Filomena Matarese, Enrique Carrillo de Santa Pau, Hendrik G. Stunnenberg

    Izdano 2011
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  2. 2
    Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays

    Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays od Antti Honkela, Jaakko Peltonen, Hande Topa, Iryna Charapitsa, Filomena Matarese, Korbinian Grote, Hendrik G. Stunnenberg, George Reid, Neil D. Lawrence, Magnus Rattray

    Izdano 2015
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  3. 3
    Quantitative Interaction Proteomics and Genome-wide Profiling of Epigenetic Histone Marks and Their Readers

    Quantitative Interaction Proteomics and Genome-wide Profiling of Epigenetic Histone Marks and Their Readers od Michiel Vermeulen, H. Christian Eberl, Filomena Matarese, Hendrik Marks, Sergei Denissov, Falk Butter, KK Lee, Jesper V. Olsen, Anthony A. Hyman, Henk G. Stunnenberg, Matthias Mann

    Izdano 2010
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  4. 4
    Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk

    Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk od Arie B. Brinkman, Hongcang Gu, Stefanie J. J. Bartels, Yingying Zhang, Filomena Matarese, Femke Simmer, Hendrik Marks, Christoph Bock, Andreas Gnirke, Alexander Meissner, Hendrik G. Stunnenberg

    Izdano 2012
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  5. 5
    Genome-Wide Binding of MBD2 Reveals Strong Preference for Highly Methylated Loci

    Genome-Wide Binding of MBD2 Reveals Strong Preference for Highly Methylated Loci od Roberta Menafra, Arie B. Brinkman, Filomena Matarese, Gianluigi Franci, Stefanie J. J. Bartels, Luan N. Nguyen, Takashi Shimbo, Paul A. Wade, Nina C. Hubner, Hendrik G. Stunnenberg

    Izdano 2014
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  6. 6
    Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues

    Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues od Femke Simmer, Arie B. Brinkman, Yassen Assenov, Filomena Matarese, Anita Kaan, Lina Sabatino, Alberto Villanueva, Dori Huertas, Manel Esteller, Thomas Lengauer, Christoph Bock, Vittorio Colantuoni, Lucia Altucci, Hendrik G. Stunnenberg

    Izdano 2012
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  7. 7
    RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity

    RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity od Anja Nitzsche, Maciej Paszkowski‐Rogacz, Filomena Matarese, Eva M. Janssen‐Megens, Nina C. Hubner, Herbert Schulz, Ingrid de Vries, Li Ding, Norbert Huebner, Matthias Mann, Hendrik G. Stunnenberg, Frank Buchholz

    Izdano 2011
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  8. 8
    miR-194-5p/BCLAF1 deregulation in AML tumorigenesis

    miR-194-5p/BCLAF1 deregulation in AML tumorigenesis od Carmela Dell’Aversana, Cristina Di Giorgio, Leo D’Amato, Gabriella Lania, Filomena Matarese, Sadia Saeed, Antonella Di Costanzo, Valeria Belsito Petrizzi, Concetta Ingenito, Joost H.A. Martens, Isabella Pallavicini, Saverio Minucci, Annamaria Carissimo, Hendrik G. Stunnenberg, Lucia Altucci

    Izdano 2017
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  9. 9
    Whole-Genome Bisulfite Sequencing of Two Distinct Interconvertible DNA Methylomes of Mouse Embryonic Stem Cells

    Whole-Genome Bisulfite Sequencing of Two Distinct Interconvertible DNA Methylomes of Mouse Embryonic Stem Cells od Ehsan Habibi, Arie B. Brinkman, Julia Arand, Leonie I. Kroeze, Hindrik H. D. Kerstens, Filomena Matarese, Konstantin Lepikhov, Marta Gut, Isabelle Brun‐Heath, Nina C. Hubner, Rosaria Benedetti, Lucia Altucci, Joop H. Jansen, Jörn Walter, Marta Gut, Hendrik Marks, H.G. Stunnenberg

    Izdano 2013
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  10. 10
    ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage

    ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage od Cornelia G. Spruijt, Martijn S. Luijsterburg, Roberta Menafra, Rik G.H. Lindeboom, Pascal W.T.C. Jansen, Raghu Ram Edupuganti, Marijke Baltissen, Wouter W. Wiegant, Moritz Voelker-Albert, Filomena Matarese, Anneloes Mensinga, Ina Poser, Harmjan R. Vos, Hendrik G. Stunnenberg, Haico van Attikum, Michiel Vermeulen

    Izdano 2016
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  11. 11
    Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131

    Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131 od Radhika A. Varier, Enrique Carrillo de Santa Pau, Petra van der Groep, Rik G.H. Lindeboom, Filomena Matarese, Anneloes Mensinga, Arne H. Smits, Raghu Ram Edupuganti, Marijke Baltissen, Pascal W.T.C. Jansen, Natalie D. ter Hoeve, Danny R. van Weely, Ina Poser, P. J. van Diest, Hendrik G. Stunnenberg, Michiel Vermeulen

    Izdano 2016
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  12. 12
    The Hematopoietic Transcription Factors RUNX1 and ERG Prevent AML1-ETO Oncogene Overexpression and Onset of the Apoptosis Program in t(8;21) AMLs

    The Hematopoietic Transcription Factors RUNX1 and ERG Prevent AML1-ETO Oncogene Overexpression and Onset of the Apoptosis Program in t(8;21) AMLs od Amit Mandoli, Abhishek A. Singh, Koen H.M. Prange, Esther Tijchon, Marjolein M. P. Oerlemans, René A. M. Dirks, Menno ter Huurne, Albertus T.J. Wierenga, Eva M. Janssen‐Megens, Kim Berentsen, Nilofar Sharifi, Bowon Kim, Filomena Matarese, Luan N. Nguyen, Nina C. Hubner, Nagesha Rao, Emile van den Akker, Lucia Altucci, Edo Vellenga, Hendrik G. Stunnenberg, Joost H.A. Martens

    Izdano 2016
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  13. 13
    eFORGE: A Tool for Identifying Cell Type-Specific Signal in Epigenomic Data

    eFORGE: A Tool for Identifying Cell Type-Specific Signal in Epigenomic Data od Charles E. Breeze, Dirk S. Paul, Jenny van Dongen, Lee M Butcher, John C. Ambrose, James E. Barrett, Robert Lowe, Vardhman K. Rakyan, Valentina Iotchkova, Mattia Frontini, Kate Downes, Willem H. Ouwehand, Jonathan Laperle, Pierre‐Étienne Jacques, Guillaume Bourque, Anke K. Bergmann, Reiner Siebert, Edo Vellenga, Sadia Saeed, Filomena Matarese, Joost H.A. Martens, Hendrik G. Stunnenberg, Andrew E. Teschendorff, Javier Herrero, Ewan Birney, Ian Dunham, Stephan Beck

    Izdano 2016
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  14. 14
    β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance

    β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance od Boris Novakovic, Ehsan Habibi, Shuang-Yin Wang, Rob J.W. Arts, Robab Davar, Wout Megchelenbrink, Bowon Kim, Tatyana Kuznetsova, Matthijs Kox, Jelle Zwaag, Filomena Matarese, Simon J. van Heeringen, Eva M. Janssen‐Megens, Nilofar Sharifi, Cheng Wang, Farid Keramati, Vivien A. C. Schoonenberg, Paul Flicek, Laura Clarke, Peter Pickkers, Simon Heath, Marta Gut, Mihai G. Netea, Joost H.A. Martens, Colin Logie, Hendrik G. Stunnenberg

    Izdano 2016
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  15. 15
    Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes

    Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes od Guoqiang Yi, Albertus T.J. Wierenga, Francesca Petraglia, Pankaj Narang, Eva M. Janssen‐Megens, Amit Mandoli, Angelika Merkel, Kim Berentsen, Bowon Kim, Filomena Matarese, Abhishek A. Singh, Ehsan Habibi, Koen H.M. Prange, André B. Mulder, Joop H. Jansen, Laura Clarke, Simon Heath, Bert A. van der Reijden, Paul Flicek, Marie‐Laure Yaspo, Marta Gut, Christoph Bock, Jan Jacob Schuringa, Lucia Altucci, Edo Vellenga, Hendrik G. Stunnenberg, Joost H.A. Martens

    Izdano 2019
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  16. 16
    Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity

    Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity od Sadia Saeed, Jessica Quintin, Hindrik H. D. Kerstens, Nagesha Rao, Ali Aghajanirefah, Filomena Matarese, Shih‐Chin Cheng, Jacqueline M. Ratter, Kim Berentsen, Martijn A. van der Ent, Nilofar Sharifi, Eva M. Janssen‐Megens, Menno ter Huurne, Amit Mandoli, Tom van Schaik, Aylwin Ng, Frances Burden, Kate Downes, Mattia Frontini, Vinod Kumar, Evangelos J. Giamarellos‐Bourboulis, Willem H. Ouwehand, J.W.M. van der Meer, Leo A. B. Joosten, Cisca Wijmenga, Joost H.A. Martens, Ramnik J. Xavier, Colin Logie, Mihai G. Netea, Hendrik G. Stunnenberg

    Izdano 2014
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  17. 17
    Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells

    Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells od Lu Chen, Bing Ge, Francesco Paolo Casale, Louella Vasquez, Tony Kwan, Diego Garrido-Martín, Stephen Watt, Ying Yan, Kousik Kundu, Simone Ecker, Avik Datta, David Richardson, Frances Burden, Daniel G. Mead, Alice Mann, José M. Fernández, Sophia Rowlston, Steven P. Wilder, Samantha Farrow, Xiaojian Shao, John Lambourne, Adriana Redensek, Cornelis A. Albers, Vyacheslav Amstislavskiy, Sofie Ashford, Kim Berentsen, Lorenzo Bomba, Guillaume Bourque, David Bujold, Stephan Busche, Maxime Caron, Shu‐Huang Chen, Warren Cheung, Olivier Delaneau, Emmanouil T. Dermitzakis, Heather Elding, Irina Colgiu, Frederik Otzen Bagger, Paul Flicek, Ehsan Habibi, Valentina Iotchkova, Eva M. Janssen‐Megens, Bowon Kim, Hans Lehrach, Ernesto Lowy, Amit Mandoli, Filomena Matarese, Matthew T. Maurano, John Morris, Véra Pancaldi, Farzin Pourfarzad, Karola Rehnström, Augusto Rendon, Thomas S. Risch, Nilofar Sharifi, Marie-Michelle Simon, Marc Sultan, Alfonso Valencia, Klaudia Walter, Shuang-Yin Wang, Mattia Frontini, Stylianos E. Antonarakis, Laura Clarke, Marie‐Laure Yaspo, Stephan Beck, Roderic Guigó, Daniel Rico, Joost H.A. Martens, Willem H. Ouwehand, Taco W. Kuijpers, Dirk S. Paul, Hendrik G. Stunnenberg, Oliver Stegle, Kate Downes, Tomi Pastinen, Nicole Soranzo

    Izdano 2016
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