Zoekresultaten - Fereydoun Hormozdiari

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  1. 1
    Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution

    Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution door Fereydoun Hormozdiari, Petra Berenbrink, Nataša Pržulj, S. Cenk Şahinalp

    Gepubliceerd in 2007
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  2. 2
    The discovery of integrated gene networks for autism and related disorders

    The discovery of integrated gene networks for autism and related disorders door Fereydoun Hormozdiari, Osnat Penn, Elhanan Borenstein, Evan E. Eichler

    Gepubliceerd in 2014
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  3. 3
    Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

    Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes door Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    Gepubliceerd in 2009
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  4. 4
    Biomolecular network motif counting and discovery by color coding

    Biomolecular network motif counting and discovery by color coding door Noga Alon, Phuong Dao, Iman Hajirasouliha, Fereydoun Hormozdiari, S. Cenk Şahinalp

    Gepubliceerd in 2008
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  5. 5
    Simultaneous structural variation discovery among multiple paired-end sequenced genomes

    Simultaneous structural variation discovery among multiple paired-end sequenced genomes door Fereydoun Hormozdiari, Iman Hajirasouliha, Andrew McPherson, Evan E. Eichler, S. Cenk Şahinalp

    Gepubliceerd in 2011
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  6. 6
    mrsFAST: a cache-oblivious algorithm for short-read mapping

    mrsFAST: a cache-oblivious algorithm for short-read mapping door Faraz Hach, Fereydoun Hormozdiari, Can Alkan, Farhad Hormozdiari, İnanç Birol, Evan E. Eichler, S. Cenk Şahinalp

    Gepubliceerd in 2010
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  7. 7
    Detection and characterization of novel sequence insertions using paired-end next-generation sequencing

    Detection and characterization of novel sequence insertions using paired-end next-generation sequencing door Iman Hajirasouliha, Fereydoun Hormozdiari, Can Alkan, Jeffrey M. Kidd, İnanç Birol, Evan E. Eichler, S. Cenk Şahinalp

    Gepubliceerd in 2010
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  8. 8
    Dissecting the genetic basis of comorbid epilepsy phenotypes in neurodevelopmental disorders

    Dissecting the genetic basis of comorbid epilepsy phenotypes in neurodevelopmental disorders door Julie Chow, Matthew Jensen, Hajar Amini, Farhad Hormozdiari, Osnat Penn, Sagiv Shifman, Santhosh Girirajan, Fereydoun Hormozdiari

    Gepubliceerd in 2019
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  9. 9
    Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

    Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery door Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach, Deniz Yörükoğlu, Can Alkan, Evan E. Eichler, S. Cenk Şahinalp

    Gepubliceerd in 2010
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  10. 10
    Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity

    Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity door Bradley P. Coe, Holly A.F. Stessman, Arvis Sulovari, Madeleine R. Geisheker, Trygve E. Bakken, Allison M. Lake, Joseph D. Dougherty, Ed S. Lein, Fereydoun Hormozdiari, Raphael Bernier, Evan E. Eichler

    Gepubliceerd in 2018
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  11. 11
    Personalized copy number and segmental duplication maps using next-generation sequencing

    Personalized copy number and segmental duplication maps using next-generation sequencing door Can Alkan, Jeffrey M. Kidd, Tomàs Marquès‐Bonet, Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Şahinalp, Richard A. Gibbs, Evan E. Eichler

    Gepubliceerd in 2009
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  12. 12
    Genomic Patterns of De Novo Mutation in Simplex Autism

    Genomic Patterns of De Novo Mutation in Simplex Autism door Tychele N. Turner, Bradley P. Coe, Diane E. Dickel, Kendra Hoekzema, Bradley J. Nelson, Michael C. Zody, Zev Kronenberg, Fereydoun Hormozdiari, Archana N. Raja, L Pennacchio, Robert B. Darnell, Evan E. Eichler

    Gepubliceerd in 2017
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  13. 13
    Resolving the complexity of the human genome using single-molecule sequencing

    Resolving the complexity of the human genome using single-molecule sequencing door Mark Chaisson, John Huddleston, Megan Y. Dennis, Peter H. Sudmant, Maika Malig, Fereydoun Hormozdiari, Francesca Antonacci, Urvashi Surti, Richard Sandstrom, Matthew Boitano, Jane M. Landolin, J Stamatoyannopoulos, Michael W. Hunkapiller, Jonas Korlach, Evan E. Eichler

    Gepubliceerd in 2014
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  14. 14
    deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data

    deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data door Andrew McPherson, Fereydoun Hormozdiari, Abdalnasser Zayed, Ryan Giuliany, Gavin Ha, Mark Sun, Malachi Griffith, Alireza Heravi Moussavi, Janine Senz, Nataliya Melnyk, Marina Pacheco, Marco A. Marra, Martin Hirst, Torsten O. Nielsen, S. Cenk Şahinalp, David G. Huntsman, Sohrab P. Shah

    Gepubliceerd in 2011
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  15. 15
    Rates and patterns of great ape retrotransposition

    Rates and patterns of great ape retrotransposition door Fereydoun Hormozdiari, Miriam K. Konkel, Javier Prado-Martinez, Giorgia Chiatante, Irene Hernando Herraez, Jerilyn A. Walker, B.E. Nelson, Can Alkan, Peter H. Sudmant, John Huddleston, Claudia Rita Catacchio, Arthur Ko, Maika Malig, Carl Baker, Great Ape Genome Project, Tomàs Marquès‐Bonet, Mario Ventura, Mark A. Batzer, Evan E. Eichler

    Gepubliceerd in 2013
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  16. 16
    Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA

    Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA door Tychele N. Turner, Fereydoun Hormozdiari, Michael H. Duyzend, Sarah A. McClymont, Paul W. Hook, Ivan Iossifov, Archana N. Raja, Carl Baker, Kendra Hoekzema, Holly A.F. Stessman, Michael C. Zody, Bradley J. Nelson, John Huddleston, Richard Sandstrom, Joshua D. Smith, D. Hanna, James M. Swanson, Elaine M. Faustman, Michael J. Bamshad, J Stamatoyannopoulos, Deborah A. Nickerson, Andrew S. McCallion, Robert B. Darnell, Evan E. Eichler

    Gepubliceerd in 2015
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  17. 17
    Deep generative AI models analyzing circulating orphan non-coding RNAs enable detection of early-stage lung cancer

    Deep generative AI models analyzing circulating orphan non-coding RNAs enable detection of early-stage lung cancer door Mehran Karimzadeh, Amir Momen-Roknabadi, Taylor B. Cavazos, Yuqi Fang, Nae-Chyun Chen, Michael Multhaup, Jennifer Yen, Jeremy Ku, Jieyang Wang, Xuan Zhao, Philip Murzynowski, Kathleen Wang, Rose Hanna, Alice Huang, Diana Corti, Dang Le Tri Nguyen, Ti Lam, Seda Kilinc, Patrick Arensdorf, Kimberly H. Chau, Anna Hartwig, Lisa Fish, Helen Li, Babak Behsaz, Olivier Elemento, James Zou, Fereydoun Hormozdiari, Babak Alipanahi, Hani Goodarzi

    Gepubliceerd in 2024
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  18. 18
    From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer

    From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer door Anna Lapuk, Chunxiao Wu, Alexander W. Wyatt, Andrew McPherson, Brian McConeghy, Sonal Brahmbhatt, Fan Mo, Amina Zoubeidi, Shawn Anderson, Robert H. Bell, Anne Haegert, Robert Shukin, Yuzhuo Wang, Ladan Fazli, Antonio Hurtado‐Coll, Edward C. Jones, Faraz Hach, Fereydoun Hormozdiari, Iman Hajirasouliha, Paul C. Boutros, Robert G. Bristow, Zhao Yong-jun, Marco A. Marra, Andrea Fanjul, Christopher A. Maher, Arul M. Chinnaiyan, Mark A. Rubin, Himisha Beltran, S. Cenk Şahinalp, Martin Gleave, Stanislav Volik, Colin C. Collins

    Gepubliceerd in 2012
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  19. 19
    Integrated genome and transcriptome sequencing identifies a novel form of hybrid and aggressive prostate cancer

    Integrated genome and transcriptome sequencing identifies a novel form of hybrid and aggressive prostate cancer door Chunxiao Wu, Alexander W. Wyatt, Anna Lapuk, Andrew McPherson, Brian McConeghy, Robert H. Bell, Shawn Anderson, Anne Haegert, Sonal Brahmbhatt, Robert Shukin, Fan Mo, Estelle Li, Ladan Fazli, Antonio Hurtado‐Coll, Edward C. Jones, Yaron S.N. Butterfield, Faraz Hach, Fereydoun Hormozdiari, Iman Hajirasouliha, Paul C. Boutros, Robert G. Bristow, Steven J.M. Jones, Martin Hirst, Marco A. Marra, Christopher A. Maher, Arul M. Chinnaiyan, S. Cenk Şahinalp, Martin Gleave, Stanislav Volik, Colin C. Collins

    Gepubliceerd in 2012
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  20. 20
    The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

    The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild door Javier Prado-Martinez, Irene Hernando-Herraez, Belén Lorente-Galdós, Marc Dabad, Óscar Ramírez, Carlos Baeza-Delgado, Carlos Morcillo-Suárez, Can Alkan, Fereydoun Hormozdiari, Emanuele Raineri, Jordi Estellé, Marcos Fernández-Callejo, Mònica Vallès, Lars Ritscher, Torsten Schöneberg, Elisa de la Calle‐Mustienes, Sònia Casillas, Raquel Rubio‐Acero, Marta Melé, Johannes Engelken, Mario Cáceres, José Luis Gómez-Skármeta, Marta Gut, Jaume Bertranpetit, Marta Gut, Teresa Abelló, Evan E. Eichler, Ismael Mingarro, Carles Lalueza‐Fox, Arcadi Navarro, Tomàs Marquès‐Bonet

    Gepubliceerd in 2013
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